RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 TRIM52Q96A61 297 aa21.53■■□□□ 1.04
HERC2-207ENST00000564734 CHD1O14646 1710 aa21.5■■□□□ 1.03
HERC2-207ENST00000564734 CEP170Q5SW79 1584 aa21.5■■□□□ 1.03
HERC2-207ENST00000564734 ZNF644Q9H582 1327 aaPredicted RBP21.48■■□□□ 1.03
HERC2-207ENST00000564734 OSCARQ8IYS5 282 aa21.47■■□□□ 1.03
HERC2-207ENST00000564734 TROQ12816 1431 aaPredicted RBP21.47■■□□□ 1.03
HERC2-207ENST00000564734 CDK11AQ9UQ88 783 aaPredicted RBP21.46■■□□□ 1.03
HERC2-207ENST00000564734 ANKRD30BQ9BXX2 1392 aa21.46■■□□□ 1.03
HERC2-207ENST00000564734 JPH4Q96JJ6 628 aa21.45■■□□□ 1.02
HERC2-207ENST00000564734 PRG4Q92954 1404 aaPredicted RBP21.45■■□□□ 1.02
HERC2-207ENST00000564734 HSPA5P11021 654 aaKnown RBP21.44■■□□□ 1.02
HERC2-207ENST00000564734 ADCY10Q96PN6 1610 aa21.43■■□□□ 1.02
HERC2-207ENST00000564734 RPRD2Q5VT52 1461 aaKnown RBP21.43■■□□□ 1.02
HERC2-207ENST00000564734 L3MBTL2Q969R5 705 aa21.42■■□□□ 1.02
HERC2-207ENST00000564734 PLB1Q6P1J6 1458 aa21.42■■□□□ 1.02
HERC2-207ENST00000564734 NUP160Q12769 1436 aa21.42■■□□□ 1.02
HERC2-207ENST00000564734 WASHC2AQ641Q2 1341 aa21.42■■□□□ 1.02
HERC2-207ENST00000564734 FOXD1Q16676 465 aa21.41■■□□□ 1.02
HERC2-207ENST00000564734 GPATCH8Q9UKJ3 1502 aaKnown RBP21.4■■□□□ 1.02
HERC2-207ENST00000564734 CAMSAP2Q08AD1 1489 aa21.4■■□□□ 1.02
HERC2-207ENST00000564734 TEX14Q8IWB6 1497 aa21.39■■□□□ 1.01
HERC2-207ENST00000564734 ITSN2Q9NZM3 1697 aa21.38■■□□□ 1.01
HERC2-207ENST00000564734 EIF4G2P78344 907 aaKnown RBP eCLIP21.38■■□□□ 1.012e-6■□□□□ 9
HERC2-207ENST00000564734 KIF14Q15058 1648 aa21.37■■□□□ 1.01
HERC2-207ENST00000564734 NCOA1Q15788 1441 aa21.36■■□□□ 1.01
HERC2-207ENST00000564734 ADGRL2O95490 1459 aa21.35■■□□□ 1.01
HERC2-207ENST00000564734 PZPP20742 1482 aa21.35■■□□□ 1.01
HERC2-207ENST00000564734 CARMIL2Q6F5E8 1435 aa21.35■■□□□ 1.01
HERC2-207ENST00000564734 ADGBQ8N7X0 1667 aa21.34■■□□□ 1.01
HERC2-207ENST00000564734 CFDP1Q9UEE9 299 aaPredicted RBP21.33■■□□□ 1.01
HERC2-207ENST00000564734 NBPF8Q3BBV2 869 aa21.33■■□□□ 1.01
HERC2-207ENST00000564734 CROCC2H7BZ55 1655 aa21.32■■□□□ 1
HERC2-207ENST00000564734 SLC4A1APQ9BWU0 796 aaKnown RBP21.31■■□□□ 1
HERC2-207ENST00000564734 ABCA8O94911 1581 aa21.31■■□□□ 1
HERC2-207ENST00000564734 CNTLNQ9NXG0 1405 aa21.3■■□□□ 1
HERC2-207ENST00000564734 SPATA31E1Q6ZUB1 1445 aa21.29■■□□□ 1
HERC2-207ENST00000564734 C11orf95C9JLR9 678 aaPredicted RBP21.29■■□□□ 1
HERC2-207ENST00000564734 FKBP8Q14318 412 aa21.28■■□□□ 1
HERC2-207ENST00000564734 CCDC7Q96M83 1385 aa21.27■■□□□ 1
HERC2-207ENST00000564734 ABCC10Q5T3U5 1492 aa21.27■■□□□ 1
HERC2-207ENST00000564734 TSHZ2Q9NRE2 1034 aa21.26■□□□□ 0.99
HERC2-207ENST00000564734 ATP10BO94823 1461 aa21.25■□□□□ 0.99
HERC2-207ENST00000564734 MBD5Q9P267 1494 aa21.24■□□□□ 0.99
HERC2-207ENST00000564734 KIAA1107Q9UPP5 1409 aa21.24■□□□□ 0.99
HERC2-207ENST00000564734 ANKRD30AQ9BXX3 1397 aa21.23■□□□□ 0.99
HERC2-207ENST00000564734 CDC42BPAQ5VT25 1732 aa21.22■□□□□ 0.99
HERC2-207ENST00000564734 SHANK2Q9UPX8 1470 aa21.21■□□□□ 0.99
HERC2-207ENST00000564734 ZNF777Q9ULD5 760 aaPredicted RBP21.21■□□□□ 0.99
HERC2-207ENST00000564734 PLEKHD1A6NEE1 506 aa21.2■□□□□ 0.98
HERC2-207ENST00000564734 POLR1AO95602 1720 aaPredicted RBP21.19■□□□□ 0.98
HERC2-207ENST00000564734 BCANQ96GW7 911 aa21.19■□□□□ 0.98
HERC2-207ENST00000564734 ERCC6L2Q5T890 1561 aa21.18■□□□□ 0.98
HERC2-207ENST00000564734 ANKRD50Q9ULJ7 1429 aa21.18■□□□□ 0.98
HERC2-207ENST00000564734 NEFLP07196 543 aa21.16■□□□□ 0.98
HERC2-207ENST00000564734 PRKRIP1Q9H875 184 aaPredicted RBP21.16■□□□□ 0.98
HERC2-207ENST00000564734 KIF7Q2M1P5 1343 aa21.16■□□□□ 0.98
HERC2-207ENST00000564734 CCDC184Q52MB2 194 aa21.15■□□□□ 0.98
HERC2-207ENST00000564734 HNRNPUQ00839 825 aaKnown RBP eCLIP21.14■□□□□ 0.98
HERC2-207ENST00000564734 PKD2Q13563 968 aa21.14■□□□□ 0.98
HERC2-207ENST00000564734 PTPRGP23470 1445 aa21.14■□□□□ 0.97
HERC2-207ENST00000564734 C9orf84Q5VXU9 1444 aa21.14■□□□□ 0.97
HERC2-207ENST00000564734 KDM5DQ9BY66 1539 aa21.14■□□□□ 0.97
HERC2-207ENST00000564734 CYB5RLQ6IPT4 315 aa21.13■□□□□ 0.97
HERC2-207ENST00000564734 CLASP1Q7Z460 1538 aa21.13■□□□□ 0.97
HERC2-207ENST00000564734 ARHGEF5Q12774 1597 aa21.11■□□□□ 0.97
HERC2-207ENST00000564734 UHRF1BP1Q6BDS2 1440 aa21.09■□□□□ 0.97
HERC2-207ENST00000564734 MYT1Q01538 1121 aa21.08■□□□□ 0.96
HERC2-207ENST00000564734 NUP155O75694 1391 aa21.07■□□□□ 0.96
HERC2-207ENST00000564734 KDM5CP41229 1560 aa21.06■□□□□ 0.96
HERC2-207ENST00000564734 BCORL1Q5H9F3 1711 aa21.06■□□□□ 0.96
HERC2-207ENST00000564734 USP47Q96K76 1375 aa21.04■□□□□ 0.96
HERC2-207ENST00000564734 ARHGEF12Q9NZN5 1544 aa21.04■□□□□ 0.96
HERC2-207ENST00000564734 TSPY4P0CV99 314 aa21.03■□□□□ 0.96
HERC2-207ENST00000564734 TSPY10P0CW01 314 aa21.03■□□□□ 0.96
HERC2-207ENST00000564734 DHX29Q7Z478 1369 aaKnown RBP21.03■□□□□ 0.96
HERC2-207ENST00000564734 SAMD9LQ8IVG5 1584 aa21.03■□□□□ 0.96
HERC2-207ENST00000564734 HNRNPMP52272 730 aaKnown RBP eCLIP21.02■□□□□ 0.966e-8■■■■■ 30
HERC2-207ENST00000564734 KIF15Q9NS87 1388 aa21.02■□□□□ 0.96
HERC2-207ENST00000564734 RALGAPBQ86X10 1494 aa21.02■□□□□ 0.96
HERC2-207ENST00000564734 PREX2Q70Z35 1606 aa21.02■□□□□ 0.95
HERC2-207ENST00000564734 CDC42BPBQ9Y5S2 1711 aa21.01■□□□□ 0.95
HERC2-207ENST00000564734 ARID4BQ4LE39 1312 aaPredicted RBP21.01■□□□□ 0.95
HERC2-207ENST00000564734 MRS2Q9HD23 443 aa21■□□□□ 0.95
HERC2-207ENST00000564734 CCDC141Q6ZP82 1450 aa20.99■□□□□ 0.95
HERC2-207ENST00000564734 SHROOM2Q13796 1616 aa20.98■□□□□ 0.95
HERC2-207ENST00000564734 ZBED9Q6R2W3 1325 aa20.96■□□□□ 0.95
HERC2-207ENST00000564734 RSPH4AQ5TD94 716 aa20.96■□□□□ 0.95
HERC2-207ENST00000564734 FAM9BQ8IZU0 186 aa20.96■□□□□ 0.95
HERC2-207ENST00000564734 ZNF326Q5BKZ1 582 aaKnown RBP20.95■□□□□ 0.94
HERC2-207ENST00000564734 MAST1Q9Y2H9 1570 aa20.94■□□□□ 0.94
HERC2-207ENST00000564734 FAM135AQ9P2D6 1515 aa20.93■□□□□ 0.94
HERC2-207ENST00000564734 NPM1P06748 294 aaKnown RBP eCLIP20.93■□□□□ 0.94
HERC2-207ENST00000564734 ERICH6BQ5W0A0 696 aa20.91■□□□□ 0.94
HERC2-207ENST00000564734 TTC37Q6PGP7 1564 aa20.91■□□□□ 0.94
HERC2-207ENST00000564734 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.9■□□□□ 0.946e-6■■■■■ 38.2
HERC2-207ENST00000564734 ROCK2O75116 1388 aaKnown RBP20.9■□□□□ 0.94
HERC2-207ENST00000564734 SYCP2Q9BX26 1530 aa20.89■□□□□ 0.93
HERC2-207ENST00000564734 CARD11Q9BXL7 1154 aa20.89■□□□□ 0.93
HERC2-207ENST00000564734 UNC13BO14795 1591 aa20.88■□□□□ 0.93
HERC2-207ENST00000564734 ABCC2Q92887 1545 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms