RNA–Protein interactions for RNA: ENST00000564572.1

CNN2-206, Transcript of calponin 2, humanhuman

Gene CNN2, Length 2,266 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-206ENST00000564572 ZCCHC11Q5TAX3 1644 aaKnown RBP21.3■■□□□ 1
CNN2-206ENST00000564572 CFDP1Q9UEE9 299 aaPredicted RBP21.29■■□□□ 1
CNN2-206ENST00000564572 ADGBQ8N7X0 1667 aa21.28■■□□□ 1
CNN2-206ENST00000564572 PREX2Q70Z35 1606 aa21.28■■□□□ 1
CNN2-206ENST00000564572 KDM5BQ9UGL1 1544 aa21.27■■□□□ 1
CNN2-206ENST00000564572 ZNF644Q9H582 1327 aaPredicted RBP21.27■■□□□ 1
CNN2-206ENST00000564572 CDC42BPBQ9Y5S2 1711 aa21.24■□□□□ 0.99
CNN2-206ENST00000564572 CHIC2Q9UKJ5 165 aa21.23■□□□□ 0.99
CNN2-206ENST00000564572 KDM6BO15054 1643 aa21.23■□□□□ 0.99
CNN2-206ENST00000564572 TTC37Q6PGP7 1564 aa21.22■□□□□ 0.99
CNN2-206ENST00000564572 ADGRL2O95490 1459 aa21.21■□□□□ 0.99
CNN2-206ENST00000564572 RRP7BPQ9NSQ0 103 aa21.21■□□□□ 0.99
CNN2-206ENST00000564572 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.21■□□□□ 0.99
CNN2-206ENST00000564572 SHANK2Q9UPX8 1470 aa21.19■□□□□ 0.98
CNN2-206ENST00000564572 MYO5CQ9NQX4 1742 aa21.19■□□□□ 0.98
CNN2-206ENST00000564572 ARHGEF5Q12774 1597 aa21.19■□□□□ 0.98
CNN2-206ENST00000564572 OSCARQ8IYS5 282 aa21.18■□□□□ 0.98
CNN2-206ENST00000564572 SAMD9LQ8IVG5 1584 aa21.17■□□□□ 0.98
CNN2-206ENST00000564572 ACIN1Q9UKV3 1341 aaKnown RBP21.16■□□□□ 0.98
CNN2-206ENST00000564572 ZNF777Q9ULD5 760 aaPredicted RBP21.15■□□□□ 0.98
CNN2-206ENST00000564572 NCOA1Q15788 1441 aa21.14■□□□□ 0.97
CNN2-206ENST00000564572 ZNF316A6NFI3 1004 aaPredicted RBP21.12■□□□□ 0.97
CNN2-206ENST00000564572 MBD5Q9P267 1494 aa21.11■□□□□ 0.97
CNN2-206ENST00000564572 ARHGAP5Q13017 1502 aa21.1■□□□□ 0.97
CNN2-206ENST00000564572 DENND4BO75064 1496 aaPredicted RBP21.09■□□□□ 0.97
CNN2-206ENST00000564572 C9orf84Q5VXU9 1444 aa21.09■□□□□ 0.97
CNN2-206ENST00000564572 TIMELESSQ9UNS1 1208 aa21.09■□□□□ 0.97
CNN2-206ENST00000564572 ANKRD30AQ9BXX3 1397 aa21.08■□□□□ 0.97
CNN2-206ENST00000564572 CCDC141Q6ZP82 1450 aa21.08■□□□□ 0.96
CNN2-206ENST00000564572 SIN3AQ96ST3 1273 aa21.06■□□□□ 0.96
CNN2-206ENST00000564572 PLEKHH2Q8IVE3 1493 aa21.06■□□□□ 0.96
CNN2-206ENST00000564572 WDR7Q9Y4E6 1490 aa21.06■□□□□ 0.96
CNN2-206ENST00000564572 ARAP3Q8WWN8 1544 aa21.05■□□□□ 0.96
CNN2-206ENST00000564572 SYCP2Q9BX26 1530 aa21.05■□□□□ 0.96
CNN2-206ENST00000564572 MAST1Q9Y2H9 1570 aa21.05■□□□□ 0.96
CNN2-206ENST00000564572 PLCH2O75038 1416 aa21.05■□□□□ 0.96
CNN2-206ENST00000564572 KIAA1107Q9UPP5 1409 aa21.03■□□□□ 0.96
CNN2-206ENST00000564572 RSPH4AQ5TD94 716 aa21.02■□□□□ 0.96
CNN2-206ENST00000564572 TRIM52Q96A61 297 aa21.02■□□□□ 0.95
CNN2-206ENST00000564572 KCNH8Q96L42 1107 aa21.01■□□□□ 0.95
CNN2-206ENST00000564572 ABCA9Q8IUA7 1624 aa21■□□□□ 0.95
CNN2-206ENST00000564572 NEUROD1Q13562 356 aa21■□□□□ 0.95
CNN2-206ENST00000564572 HNRNPMP52272 730 aaKnown RBP eCLIP20.99■□□□□ 0.95
CNN2-206ENST00000564572 ANKRD50Q9ULJ7 1429 aa20.99■□□□□ 0.95
CNN2-206ENST00000564572 TSPY4P0CV99 314 aa20.99■□□□□ 0.95
CNN2-206ENST00000564572 TSPY10P0CW01 314 aa20.99■□□□□ 0.95
CNN2-206ENST00000564572 MPHOSPH9Q99550 1183 aa20.99■□□□□ 0.95
CNN2-206ENST00000564572 ABCC1P33527 1531 aa20.99■□□□□ 0.95
CNN2-206ENST00000564572 PLXNC1O60486 1568 aa20.97■□□□□ 0.95
CNN2-206ENST00000564572 PZPP20742 1482 aa20.97■□□□□ 0.95
CNN2-206ENST00000564572 DIEXFQ68CQ4 756 aaKnown RBP20.97■□□□□ 0.95
CNN2-206ENST00000564572 ASXL2Q76L83 1435 aa20.95■□□□□ 0.94
CNN2-206ENST00000564572 KIF15Q9NS87 1388 aa20.95■□□□□ 0.94
CNN2-206ENST00000564572 KDM5DQ9BY66 1539 aa20.94■□□□□ 0.94
CNN2-206ENST00000564572 ARHGEF12Q9NZN5 1544 aa20.94■□□□□ 0.94
CNN2-206ENST00000564572 TONSLQ96HA7 1378 aa20.94■□□□□ 0.94
CNN2-206ENST00000564572 EFCAB2Q5VUJ9 269 aa20.93■□□□□ 0.94
CNN2-206ENST00000564572 PPP1R15AO75807 674 aaPredicted RBP20.89■□□□□ 0.94
CNN2-206ENST00000564572 ANKRD30BQ9BXX2 1392 aa20.89■□□□□ 0.93
CNN2-206ENST00000564572 SLC4A1APQ9BWU0 796 aaKnown RBP20.87■□□□□ 0.93
CNN2-206ENST00000564572 UNC13BO14795 1591 aa20.86■□□□□ 0.93
CNN2-206ENST00000564572 RPRD2Q5VT52 1461 aaKnown RBP20.86■□□□□ 0.93
CNN2-206ENST00000564572 FANCAO15360 1455 aa20.85■□□□□ 0.93
CNN2-206ENST00000564572 NPM1P06748 294 aaKnown RBP eCLIP20.84■□□□□ 0.93
CNN2-206ENST00000564572 DUOX2Q9NRD8 1548 aa20.84■□□□□ 0.93
CNN2-206ENST00000564572 TRAPPC8Q9Y2L5 1435 aa20.83■□□□□ 0.93
CNN2-206ENST00000564572 FOXD1Q16676 465 aa20.81■□□□□ 0.92
CNN2-206ENST00000564572 ZFYVE16Q7Z3T8 1539 aa20.81■□□□□ 0.92
CNN2-206ENST00000564572 NUP155O75694 1391 aa20.8■□□□□ 0.92
CNN2-206ENST00000564572 RTEL1-TNFRSF6BF6WH68 1400 aa20.8■□□□□ 0.92
CNN2-206ENST00000564572 ERBINQ96RT1 1412 aa20.8■□□□□ 0.92
CNN2-206ENST00000564572 RIMBP3CA6NJZ7 1639 aa20.79■□□□□ 0.92
CNN2-206ENST00000564572 RIMBP3BA6NNM3 1639 aa20.79■□□□□ 0.92
CNN2-206ENST00000564572 RIMBP3Q9UFD9 1639 aa20.79■□□□□ 0.92
CNN2-206ENST00000564572 CFAP74Q9C0B2 1584 aa20.79■□□□□ 0.92
CNN2-206ENST00000564572 INO80Q9ULG1 1556 aaPredicted RBP20.78■□□□□ 0.92
CNN2-206ENST00000564572 TEX14Q8IWB6 1497 aa20.78■□□□□ 0.92
CNN2-206ENST00000564572 FAM135AQ9P2D6 1515 aa20.77■□□□□ 0.92
CNN2-206ENST00000564572 ADGRL1O94910 1474 aa20.77■□□□□ 0.92
CNN2-206ENST00000564572 MAGI2Q86UL8 1455 aa20.77■□□□□ 0.92
CNN2-206ENST00000564572 IQGAP3Q86VI3 1631 aa20.76■□□□□ 0.91
CNN2-206ENST00000564572 PKD2Q13563 968 aa20.75■□□□□ 0.91
CNN2-206ENST00000564572 ATP7AQ04656 1500 aa20.73■□□□□ 0.91
CNN2-206ENST00000564572 SPAG9O60271 1321 aaKnown RBP20.72■□□□□ 0.91
CNN2-206ENST00000564572 CD109Q6YHK3 1445 aa20.7■□□□□ 0.91
CNN2-206ENST00000564572 SCAPERQ9BY12 1400 aa20.7■□□□□ 0.91
CNN2-206ENST00000564572 AFAP1Q8N556 730 aa20.69■□□□□ 0.9
CNN2-206ENST00000564572 L3MBTL2Q969R5 705 aa20.69■□□□□ 0.9
CNN2-206ENST00000564572 DEPDC5O75140 1603 aa20.68■□□□□ 0.9
CNN2-206ENST00000564572 EIF2AK4Q9P2K8 1649 aaKnown RBP20.66■□□□□ 0.9
CNN2-206ENST00000564572 ZNF518AQ6AHZ1 1483 aa20.66■□□□□ 0.9
CNN2-206ENST00000564572 MAP3K4Q9Y6R4 1608 aa20.65■□□□□ 0.9
CNN2-206ENST00000564572 KDM5CP41229 1560 aa20.65■□□□□ 0.9
CNN2-206ENST00000564572 KIDINS220Q9ULH0 1771 aa20.64■□□□□ 0.9
CNN2-206ENST00000564572 GLI2P10070 1586 aa20.64■□□□□ 0.89
CNN2-206ENST00000564572 NEO1Q92859 1461 aa20.63■□□□□ 0.89
CNN2-206ENST00000564572 POGZQ7Z3K3 1410 aa20.62■□□□□ 0.89
CNN2-206ENST00000564572 CYB5RLQ6IPT4 315 aa20.61■□□□□ 0.89
CNN2-206ENST00000564572 MIER1Q8N108 512 aa20.58■□□□□ 0.89
CNN2-206ENST00000564572 ATP10AO60312 1499 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms