RNA–Protein interactions for RNA: ENST00000564529.1

SCAMP2-205, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-205ENST00000564529 TTC37Q6PGP7 1564 aa24.25■■□□□ 1.47
SCAMP2-205ENST00000564529 CFAP74Q9C0B2 1584 aa24.25■■□□□ 1.47
SCAMP2-205ENST00000564529 POGZQ7Z3K3 1410 aa24.24■■□□□ 1.47
SCAMP2-205ENST00000564529 ZMYM4Q5VZL5 1548 aa24.23■■□□□ 1.47
SCAMP2-205ENST00000564529 HECW1Q76N89 1606 aa24.22■■□□□ 1.47
SCAMP2-205ENST00000564529 ZFYVE16Q7Z3T8 1539 aa24.21■■□□□ 1.47
SCAMP2-205ENST00000564529 SIGLEC1Q9BZZ2 1709 aa24.21■■□□□ 1.47
SCAMP2-205ENST00000564529 MLECQ14165 292 aa24.19■■□□□ 1.46
SCAMP2-205ENST00000564529 MAGI2Q86UL8 1455 aa24.19■■□□□ 1.46
SCAMP2-205ENST00000564529 CDK13Q14004 1512 aaKnown RBP24.17■■□□□ 1.46
SCAMP2-205ENST00000564529 ATP1B4Q9UN42 357 aaPredicted RBP24.17■■□□□ 1.46
SCAMP2-205ENST00000564529 CCDC18Q5T9S5 1454 aa24.16■■□□□ 1.46
SCAMP2-205ENST00000564529 SCAPERQ9BY12 1400 aa24.16■■□□□ 1.46
SCAMP2-205ENST00000564529 PLCH2O75038 1416 aa24.14■■□□□ 1.45
SCAMP2-205ENST00000564529 CDK11AQ9UQ88 783 aaPredicted RBP24.14■■□□□ 1.45
SCAMP2-205ENST00000564529 CERKQ8TCT0 537 aa24.1■■□□□ 1.45
SCAMP2-205ENST00000564529 LRRIQ1Q96JM4 1722 aa24.09■■□□□ 1.45
SCAMP2-205ENST00000564529 FER1L4A9Z1Z3 1794 aa24.08■■□□□ 1.45
SCAMP2-205ENST00000564529 ATP10AO60312 1499 aa24.07■■□□□ 1.44
SCAMP2-205ENST00000564529 MAP3K1Q13233 1512 aa24.07■■□□□ 1.44
SCAMP2-205ENST00000564529 EFCAB2Q5VUJ9 269 aa24.06■■□□□ 1.44
SCAMP2-205ENST00000564529 ARHGEF12Q9NZN5 1544 aa24.05■■□□□ 1.44
SCAMP2-205ENST00000564529 TROQ12816 1431 aaPredicted RBP24.04■■□□□ 1.44
SCAMP2-205ENST00000564529 C9orf84Q5VXU9 1444 aa24.04■■□□□ 1.44
SCAMP2-205ENST00000564529 CEBPAP49715 358 aaPredicted RBP24.03■■□□□ 1.44
SCAMP2-205ENST00000564529 MYO5CQ9NQX4 1742 aa23.98■■□□□ 1.43
SCAMP2-205ENST00000564529 AFAP1Q8N556 730 aa23.97■■□□□ 1.43
SCAMP2-205ENST00000564529 KIF14Q15058 1648 aa23.96■■□□□ 1.43
SCAMP2-205ENST00000564529 TIAM1Q13009 1591 aa23.96■■□□□ 1.43
SCAMP2-205ENST00000564529 PREX1Q8TCU6 1659 aa23.95■■□□□ 1.43
SCAMP2-205ENST00000564529 ZNF518AQ6AHZ1 1483 aa23.95■■□□□ 1.42
SCAMP2-205ENST00000564529 APLP2Q06481 763 aa23.93■■□□□ 1.42
SCAMP2-205ENST00000564529 MTUS2Q5JR59 1369 aa23.92■■□□□ 1.42
SCAMP2-205ENST00000564529 ARHGAP5Q13017 1502 aa23.92■■□□□ 1.42
SCAMP2-205ENST00000564529 KDM5CP41229 1560 aa23.91■■□□□ 1.42
SCAMP2-205ENST00000564529 MYT1LQ9UL68 1186 aa23.91■■□□□ 1.42
SCAMP2-205ENST00000564529 LRRC9Q6ZRR7 1453 aa23.91■■□□□ 1.42
SCAMP2-205ENST00000564529 KANK4Q5T7N3 995 aaPredicted RBP23.9■■□□□ 1.42
SCAMP2-205ENST00000564529 DMRT2Q9Y5R5 561 aa23.9■■□□□ 1.42
SCAMP2-205ENST00000564529 STRCQ7RTU9 1775 aa23.88■■□□□ 1.41
SCAMP2-205ENST00000564529 UHRF1BP1Q6BDS2 1440 aa23.88■■□□□ 1.41
SCAMP2-205ENST00000564529 EHBP1L1Q8N3D4 1523 aa23.88■■□□□ 1.41
SCAMP2-205ENST00000564529 DIP2CQ9Y2E4 1556 aa23.87■■□□□ 1.41
SCAMP2-205ENST00000564529 SETD1BQ9UPS6 1966 aaKnown RBP23.84■■□□□ 1.41
SCAMP2-205ENST00000564529 REREQ9P2R6 1566 aa23.83■■□□□ 1.41
SCAMP2-205ENST00000564529 MLH3Q9UHC1 1453 aa23.83■■□□□ 1.41
SCAMP2-205ENST00000564529 ABCA6Q8N139 1617 aa23.81■■□□□ 1.4
SCAMP2-205ENST00000564529 TRAPPC8Q9Y2L5 1435 aa23.81■■□□□ 1.4
SCAMP2-205ENST00000564529 CDC42BPBQ9Y5S2 1711 aa23.81■■□□□ 1.4
SCAMP2-205ENST00000564529 DISP3Q9P2K9 1392 aa23.78■■□□□ 1.4
SCAMP2-205ENST00000564529 ESF1Q9H501 851 aaKnown RBP23.78■■□□□ 1.4
SCAMP2-205ENST00000564529 C3P01024 1663 aa23.78■■□□□ 1.4
SCAMP2-205ENST00000564529 AGLP35573 1532 aa23.78■■□□□ 1.4
SCAMP2-205ENST00000564529 PTPRTO14522 1441 aa23.77■■□□□ 1.4
SCAMP2-205ENST00000564529 ILDR2Q71H61 639 aa23.77■■□□□ 1.4
SCAMP2-205ENST00000564529 GPATCH8Q9UKJ3 1502 aaKnown RBP23.77■■□□□ 1.4
SCAMP2-205ENST00000564529 NCOA2Q15596 1464 aa23.76■■□□□ 1.39
SCAMP2-205ENST00000564529 ABCC1P33527 1531 aa23.76■■□□□ 1.39
SCAMP2-205ENST00000564529 PREX2Q70Z35 1606 aa23.74■■□□□ 1.39
SCAMP2-205ENST00000564529 CCNB3Q8WWL7 1395 aa23.74■■□□□ 1.39
SCAMP2-205ENST00000564529 SUPT6HQ7KZ85 1726 aaKnown RBP23.73■■□□□ 1.39
SCAMP2-205ENST00000564529 ITSN2Q9NZM3 1697 aa23.71■■□□□ 1.39
SCAMP2-205ENST00000564529 KIDINS220Q9ULH0 1771 aa23.7■■□□□ 1.38
SCAMP2-205ENST00000564529 CNTLNQ9NXG0 1405 aa23.69■■□□□ 1.38
SCAMP2-205ENST00000564529 LTBP4Q8N2S1 1624 aa23.68■■□□□ 1.38
SCAMP2-205ENST00000564529 NCOA1Q15788 1441 aa23.67■■□□□ 1.38
SCAMP2-205ENST00000564529 CFDP1Q9UEE9 299 aaPredicted RBP23.67■■□□□ 1.38
SCAMP2-205ENST00000564529 SOCS7O14512 581 aa23.66■■□□□ 1.38
SCAMP2-205ENST00000564529 CDC42BPAQ5VT25 1732 aa23.66■■□□□ 1.38
SCAMP2-205ENST00000564529 ZNF777Q9ULD5 760 aaPredicted RBP23.65■■□□□ 1.38
SCAMP2-205ENST00000564529 MIA2Q96PC5 1412 aa23.64■■□□□ 1.37
SCAMP2-205ENST00000564529 SAMD9LQ8IVG5 1584 aa23.64■■□□□ 1.37
SCAMP2-205ENST00000564529 MYOM3Q5VTT5 1437 aa23.63■■□□□ 1.37
SCAMP2-205ENST00000564529 ZMYM3Q14202 1370 aa23.62■■□□□ 1.37
SCAMP2-205ENST00000564529 NPATQ14207 1427 aa23.61■■□□□ 1.37
SCAMP2-205ENST00000564529 SPAG9O60271 1321 aaKnown RBP23.6■■□□□ 1.37
SCAMP2-205ENST00000564529 KIAA1107Q9UPP5 1409 aa23.6■■□□□ 1.37
SCAMP2-205ENST00000564529 HNRNPMP52272 730 aaKnown RBP eCLIP23.6■■□□□ 1.37
SCAMP2-205ENST00000564529 IQSEC2Q5JU85 1478 aa23.6■■□□□ 1.37
SCAMP2-205ENST00000564529 CAMSAP1Q5T5Y3 1602 aa23.59■■□□□ 1.37
SCAMP2-205ENST00000564529 SYCP2Q9BX26 1530 aa23.59■■□□□ 1.37
SCAMP2-205ENST00000564529 NCKAP5LQ9HCH0 1330 aa23.58■■□□□ 1.36
SCAMP2-205ENST00000564529 MROH2AA6NES4 1674 aa23.57■■□□□ 1.36
SCAMP2-205ENST00000564529 SPATA31D1Q6ZQQ2 1576 aa23.57■■□□□ 1.36
SCAMP2-205ENST00000564529 PLEKHH2Q8IVE3 1493 aa23.56■■□□□ 1.36
SCAMP2-205ENST00000564529 ZNF644Q9H582 1327 aaPredicted RBP23.55■■□□□ 1.36
SCAMP2-205ENST00000564529 PPARGC1BQ86YN6 1023 aaKnown RBP23.54■■□□□ 1.36
SCAMP2-205ENST00000564529 RSPH4AQ5TD94 716 aa23.53■■□□□ 1.36
SCAMP2-205ENST00000564529 ZNF335Q9H4Z2 1342 aaPredicted RBP23.53■■□□□ 1.36
SCAMP2-205ENST00000564529 FGD6Q6ZV73 1430 aa23.52■■□□□ 1.36
SCAMP2-205ENST00000564529 ATP7AQ04656 1500 aa23.52■■□□□ 1.36
SCAMP2-205ENST00000564529 MBD5Q9P267 1494 aa23.51■■□□□ 1.35
SCAMP2-205ENST00000564529 A2MP01023 1474 aa23.5■■□□□ 1.35
SCAMP2-205ENST00000564529 CLTCQ00610 1675 aaKnown RBP23.5■■□□□ 1.35
SCAMP2-205ENST00000564529 TCOF1Q13428 1488 aaKnown RBP23.49■■□□□ 1.35
SCAMP2-205ENST00000564529 PLXNC1O60486 1568 aa23.49■■□□□ 1.35
SCAMP2-205ENST00000564529 GGT6Q6P531 493 aa23.49■■□□□ 1.35
SCAMP2-205ENST00000564529 PTPRKQ15262 1439 aa23.49■■□□□ 1.35
SCAMP2-205ENST00000564529 PKD2Q13563 968 aa23.48■■□□□ 1.35
SCAMP2-205ENST00000564529 CAMSAP2Q08AD1 1489 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms