RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 ROCK1Q13464 1354 aa23.8■■□□□ 1.4
CCNF-204ENST00000564333 ADGBQ8N7X0 1667 aa23.8■■□□□ 1.4
CCNF-204ENST00000564333 ABCC5O15440 1437 aa23.79■■□□□ 1.4
CCNF-204ENST00000564333 CROCC2H7BZ55 1655 aa23.79■■□□□ 1.4
CCNF-204ENST00000564333 TONSLQ96HA7 1378 aa23.79■■□□□ 1.4
CCNF-204ENST00000564333 GPATCH8Q9UKJ3 1502 aaKnown RBP23.76■■□□□ 1.39
CCNF-204ENST00000564333 DENND4BO75064 1496 aaPredicted RBP23.75■■□□□ 1.39
CCNF-204ENST00000564333 CDC42BPAQ5VT25 1732 aa23.75■■□□□ 1.39
CCNF-204ENST00000564333 SHROOM2Q13796 1616 aa23.74■■□□□ 1.39
CCNF-204ENST00000564333 PPP1R15AO75807 674 aaPredicted RBP23.73■■□□□ 1.39
CCNF-204ENST00000564333 ZNF644Q9H582 1327 aaPredicted RBP23.73■■□□□ 1.39
CCNF-204ENST00000564333 ATP10BO94823 1461 aa23.73■■□□□ 1.39
CCNF-204ENST00000564333 YTHDC1Q96MU7 727 aaKnown RBP23.72■■□□□ 1.39
CCNF-204ENST00000564333 KDM5BQ9UGL1 1544 aa23.69■■□□□ 1.38
CCNF-204ENST00000564333 ABCC10Q5T3U5 1492 aa23.69■■□□□ 1.38
CCNF-204ENST00000564333 TRIM52Q96A61 297 aa23.69■■□□□ 1.38
CCNF-204ENST00000564333 CFDP1Q9UEE9 299 aaPredicted RBP23.69■■□□□ 1.38
CCNF-204ENST00000564333 PTPRGP23470 1445 aa23.66■■□□□ 1.38
CCNF-204ENST00000564333 ADGRL2O95490 1459 aa23.65■■□□□ 1.38
CCNF-204ENST00000564333 PLEKHD1A6NEE1 506 aa23.63■■□□□ 1.37
CCNF-204ENST00000564333 MPHOSPH9Q99550 1183 aa23.61■■□□□ 1.37
CCNF-204ENST00000564333 SHANK2Q9UPX8 1470 aa23.58■■□□□ 1.37
CCNF-204ENST00000564333 NCOA1Q15788 1441 aa23.58■■□□□ 1.37
CCNF-204ENST00000564333 PREX2Q70Z35 1606 aa23.57■■□□□ 1.36
CCNF-204ENST00000564333 ZNF777Q9ULD5 760 aaPredicted RBP23.57■■□□□ 1.36
CCNF-204ENST00000564333 ERCC6L2Q5T890 1561 aa23.55■■□□□ 1.36
CCNF-204ENST00000564333 CLASP1Q7Z460 1538 aa23.53■■□□□ 1.36
CCNF-204ENST00000564333 CDC42BPBQ9Y5S2 1711 aa23.53■■□□□ 1.36
CCNF-204ENST00000564333 PZPP20742 1482 aa23.53■■□□□ 1.36
CCNF-204ENST00000564333 ABCC2Q92887 1545 aa23.52■■□□□ 1.36
CCNF-204ENST00000564333 ANKRD30AQ9BXX3 1397 aa23.52■■□□□ 1.36
CCNF-204ENST00000564333 ARHGEF5Q12774 1597 aa23.52■■□□□ 1.36
CCNF-204ENST00000564333 RPRD2Q5VT52 1461 aaKnown RBP23.5■■□□□ 1.35
CCNF-204ENST00000564333 ANKRD30BQ9BXX2 1392 aa23.5■■□□□ 1.35
CCNF-204ENST00000564333 SAMD9LQ8IVG5 1584 aa23.5■■□□□ 1.35
CCNF-204ENST00000564333 C9orf84Q5VXU9 1444 aa23.49■■□□□ 1.35
CCNF-204ENST00000564333 FOXD1Q16676 465 aa23.48■■□□□ 1.35
CCNF-204ENST00000564333 TTC37Q6PGP7 1564 aa23.47■■□□□ 1.35
CCNF-204ENST00000564333 HIRIP3Q9BW71 556 aaPredicted RBP23.47■■□□□ 1.35
CCNF-204ENST00000564333 DDX10Q13206 875 aaKnown RBP23.47■■□□□ 1.35
CCNF-204ENST00000564333 TEX14Q8IWB6 1497 aa23.46■■□□□ 1.35
CCNF-204ENST00000564333 SLC4A1APQ9BWU0 796 aaKnown RBP23.45■■□□□ 1.35
CCNF-204ENST00000564333 ANKRD50Q9ULJ7 1429 aa23.44■■□□□ 1.34
CCNF-204ENST00000564333 MYT1Q01538 1121 aa23.44■■□□□ 1.34
CCNF-204ENST00000564333 MYO5CQ9NQX4 1742 aa23.43■■□□□ 1.34
CCNF-204ENST00000564333 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.42■■□□□ 1.34
CCNF-204ENST00000564333 CCDC141Q6ZP82 1450 aa23.41■■□□□ 1.34
CCNF-204ENST00000564333 MBD5Q9P267 1494 aa23.41■■□□□ 1.34
CCNF-204ENST00000564333 ZCCHC11Q5TAX3 1644 aaKnown RBP23.4■■□□□ 1.34
CCNF-204ENST00000564333 KDM5DQ9BY66 1539 aa23.4■■□□□ 1.34
CCNF-204ENST00000564333 KIAA1107Q9UPP5 1409 aa23.39■■□□□ 1.34
CCNF-204ENST00000564333 L3MBTL2Q969R5 705 aa23.38■■□□□ 1.33
CCNF-204ENST00000564333 ARHGAP5Q13017 1502 aa23.38■■□□□ 1.33
CCNF-204ENST00000564333 SYCP2Q9BX26 1530 aa23.37■■□□□ 1.33
CCNF-204ENST00000564333 UHRF1BP1LA0JNW5 1464 aa23.35■■□□□ 1.33
CCNF-204ENST00000564333 MAST1Q9Y2H9 1570 aa23.35■■□□□ 1.33
CCNF-204ENST00000564333 KIF15Q9NS87 1388 aa23.34■■□□□ 1.33
CCNF-204ENST00000564333 TSPY4P0CV99 314 aa23.34■■□□□ 1.33
CCNF-204ENST00000564333 TSPY10P0CW01 314 aa23.34■■□□□ 1.33
CCNF-204ENST00000564333 HNRNPMP52272 730 aaKnown RBP eCLIP23.33■■□□□ 1.32
CCNF-204ENST00000564333 HSPA5P11021 654 aaKnown RBP23.29■■□□□ 1.32
CCNF-204ENST00000564333 PLEKHH2Q8IVE3 1493 aa23.28■■□□□ 1.32
CCNF-204ENST00000564333 PLXNC1O60486 1568 aa23.28■■□□□ 1.32
CCNF-204ENST00000564333 EIF4G2P78344 907 aaKnown RBP eCLIP23.27■■□□□ 1.32
CCNF-204ENST00000564333 NUP155O75694 1391 aa23.27■■□□□ 1.32
CCNF-204ENST00000564333 PKD2Q13563 968 aa23.27■■□□□ 1.32
CCNF-204ENST00000564333 POLR1AO95602 1720 aaPredicted RBP23.26■■□□□ 1.31
CCNF-204ENST00000564333 RSPH4AQ5TD94 716 aa23.26■■□□□ 1.31
CCNF-204ENST00000564333 KCNH8Q96L42 1107 aa23.26■■□□□ 1.31
CCNF-204ENST00000564333 ANP32CO43423 234 aa23.25■■□□□ 1.31
CCNF-204ENST00000564333 UNC13BO14795 1591 aa23.24■■□□□ 1.31
CCNF-204ENST00000564333 OSCARQ8IYS5 282 aa23.24■■□□□ 1.31
CCNF-204ENST00000564333 NBPF8Q3BBV2 869 aa23.23■■□□□ 1.31
CCNF-204ENST00000564333 CCER2I3L3R5 266 aa23.21■■□□□ 1.31
CCNF-204ENST00000564333 FAM135AQ9P2D6 1515 aa23.21■■□□□ 1.31
CCNF-204ENST00000564333 WASHC2AQ641Q2 1341 aa23.21■■□□□ 1.31
CCNF-204ENST00000564333 ABCC1P33527 1531 aa23.2■■□□□ 1.3
CCNF-204ENST00000564333 PLCH2O75038 1416 aa23.19■■□□□ 1.3
CCNF-204ENST00000564333 ARHGEF12Q9NZN5 1544 aa23.17■■□□□ 1.3
CCNF-204ENST00000564333 SPATA31E1Q6ZUB1 1445 aa23.15■■□□□ 1.3
CCNF-204ENST00000564333 CNTLNQ9NXG0 1405 aa23.15■■□□□ 1.3
CCNF-204ENST00000564333 IQGAP3Q86VI3 1631 aa23.14■■□□□ 1.3
CCNF-204ENST00000564333 ARAP3Q8WWN8 1544 aa23.14■■□□□ 1.29
CCNF-204ENST00000564333 DUOX2Q9NRD8 1548 aa23.14■■□□□ 1.29
CCNF-204ENST00000564333 CCDC7Q96M83 1385 aa23.12■■□□□ 1.29
CCNF-204ENST00000564333 UHRF1BP1Q6BDS2 1440 aa23.11■■□□□ 1.29
CCNF-204ENST00000564333 KDM5CP41229 1560 aa23.1■■□□□ 1.29
CCNF-204ENST00000564333 RALGAPBQ86X10 1494 aa23.09■■□□□ 1.29
CCNF-204ENST00000564333 WDR7Q9Y4E6 1490 aa23.09■■□□□ 1.29
CCNF-204ENST00000564333 MAGI2Q86UL8 1455 aa23.08■■□□□ 1.29
CCNF-204ENST00000564333 ERBINQ96RT1 1412 aa23.08■■□□□ 1.29
CCNF-204ENST00000564333 EFCAB2Q5VUJ9 269 aa23.08■■□□□ 1.28
CCNF-204ENST00000564333 ABCA9Q8IUA7 1624 aa23.06■■□□□ 1.28
CCNF-204ENST00000564333 C11orf95C9JLR9 678 aaPredicted RBP23.04■■□□□ 1.28
CCNF-204ENST00000564333 USP47Q96K76 1375 aa23.04■■□□□ 1.28
CCNF-204ENST00000564333 ZNF326Q5BKZ1 582 aaKnown RBP23.04■■□□□ 1.28
CCNF-204ENST00000564333 TRAPPC8Q9Y2L5 1435 aa23.04■■□□□ 1.28
CCNF-204ENST00000564333 BCORL1Q5H9F3 1711 aa23.03■■□□□ 1.28
CCNF-204ENST00000564333 ZFYVE16Q7Z3T8 1539 aa23.03■■□□□ 1.28
CCNF-204ENST00000564333 KIF7Q2M1P5 1343 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms