RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 NAIPQ13075 1403 aa16.37■□□□□ 0.21
SCAMP2-204ENST00000563829 DCAF11Q8TEB1 546 aa16.37■□□□□ 0.21
SCAMP2-204ENST00000563829 FAM43AQ8N2R8 423 aa16.36■□□□□ 0.21
SCAMP2-204ENST00000563829 TMC1Q8TDI8 760 aa16.36■□□□□ 0.21
SCAMP2-204ENST00000563829 FMN1Q68DA7 1419 aa16.36■□□□□ 0.21
SCAMP2-204ENST00000563829 CFAP43Q8NDM7 1665 aa16.35■□□□□ 0.21
SCAMP2-204ENST00000563829 FRAT2O75474 233 aaPredicted RBP16.35■□□□□ 0.21
SCAMP2-204ENST00000563829 NBPF8Q3BBV2 869 aa16.34■□□□□ 0.21
SCAMP2-204ENST00000563829 IGF1RP08069 1367 aa16.34■□□□□ 0.21
SCAMP2-204ENST00000563829 FHOD3Q2V2M9 1422 aa16.34■□□□□ 0.21
SCAMP2-204ENST00000563829 RCAN3Q9UKA8 241 aa16.33■□□□□ 0.21
SCAMP2-204ENST00000563829 CARMIL1Q5VZK9 1371 aa16.32■□□□□ 0.2
SCAMP2-204ENST00000563829 PNISRQ8TF01 805 aaKnown RBP16.32■□□□□ 0.2
SCAMP2-204ENST00000563829 GLIPR1L2Q4G1C9 344 aa16.31■□□□□ 0.2
SCAMP2-204ENST00000563829 VSIG10Q8N0Z9 540 aa16.31■□□□□ 0.2
SCAMP2-204ENST00000563829 MTUS2Q5JR59 1369 aa16.31■□□□□ 0.2
SCAMP2-204ENST00000563829 PLIN1O60240 522 aa16.29■□□□□ 0.2
SCAMP2-204ENST00000563829 MPHOSPH9Q99550 1183 aa16.28■□□□□ 0.2
SCAMP2-204ENST00000563829 DHX29Q7Z478 1369 aaKnown RBP16.27■□□□□ 0.19
SCAMP2-204ENST00000563829 ZMYND15Q9H091 742 aa16.26■□□□□ 0.19
SCAMP2-204ENST00000563829 ZNF326Q5BKZ1 582 aaKnown RBP16.25■□□□□ 0.19
SCAMP2-204ENST00000563829 RRAGDQ9NQL2 400 aaPredicted RBP16.24■□□□□ 0.19
SCAMP2-204ENST00000563829 DENND4BO75064 1496 aaPredicted RBP16.24■□□□□ 0.19
SCAMP2-204ENST00000563829 FYCO1Q9BQS8 1478 aa16.23■□□□□ 0.19
SCAMP2-204ENST00000563829 ARXQ96QS3 562 aa16.23■□□□□ 0.19
SCAMP2-204ENST00000563829 CRBNQ96SW2 442 aa16.22■□□□□ 0.19
SCAMP2-204ENST00000563829 CASKIN1Q8WXD9 1431 aa16.21■□□□□ 0.19
SCAMP2-204ENST00000563829 SPATA31E1Q6ZUB1 1445 aa16.21■□□□□ 0.19
SCAMP2-204ENST00000563829 CDCA7LQ96GN5 454 aa16.2■□□□□ 0.18
SCAMP2-204ENST00000563829 BICRAQ9NZM4 1560 aa16.2■□□□□ 0.18
SCAMP2-204ENST00000563829 NAP1L5Q96NT1 182 aaPredicted RBP16.2■□□□□ 0.18
SCAMP2-204ENST00000563829 POGKQ9P215 609 aa16.2■□□□□ 0.18
SCAMP2-204ENST00000563829 MYOM3Q5VTT5 1437 aa16.17■□□□□ 0.18
SCAMP2-204ENST00000563829 FGD5Q6ZNL6 1462 aa16.16■□□□□ 0.18
SCAMP2-204ENST00000563829 ABCA5Q8WWZ7 1642 aa16.16■□□□□ 0.18
SCAMP2-204ENST00000563829 HSP90AA2PQ14568 343 aaPredicted RBP16.16■□□□□ 0.18
SCAMP2-204ENST00000563829 FAM161AQ3B820 660 aa16.14■□□□□ 0.17
SCAMP2-204ENST00000563829 RGS3P49796 1198 aa16.14■□□□□ 0.17
SCAMP2-204ENST00000563829 KDM6BO15054 1643 aa16.13■□□□□ 0.17
SCAMP2-204ENST00000563829 LRPPRCP42704 1394 aaKnown RBP16.12■□□□□ 0.17
SCAMP2-204ENST00000563829 C8orf34Q49A92 452 aa16.12■□□□□ 0.17
SCAMP2-204ENST00000563829 C20orf194Q5TEA3 1177 aa16.12■□□□□ 0.17
SCAMP2-204ENST00000563829 USP47Q96K76 1375 aa16.12■□□□□ 0.17
SCAMP2-204ENST00000563829 HECW1Q76N89 1606 aa16.12■□□□□ 0.17
SCAMP2-204ENST00000563829 PNNQ9H307 717 aaKnown RBP16.11■□□□□ 0.17
SCAMP2-204ENST00000563829 CFTRP13569 1480 aa16.11■□□□□ 0.17
SCAMP2-204ENST00000563829 HSP90AA1P07900 732 aaKnown RBP16.11■□□□□ 0.17
SCAMP2-204ENST00000563829 SLC4A1APQ9BWU0 796 aaKnown RBP16.1■□□□□ 0.17
SCAMP2-204ENST00000563829 RPRD2Q5VT52 1461 aaKnown RBP16.1■□□□□ 0.17
SCAMP2-204ENST00000563829 POLR1AO95602 1720 aaPredicted RBP16.1■□□□□ 0.17
SCAMP2-204ENST00000563829 MYBBP1AQ9BQG0 1328 aaKnown RBP16.1■□□□□ 0.17
SCAMP2-204ENST00000563829 ANKRD30BQ9BXX2 1392 aa16.09■□□□□ 0.17
SCAMP2-204ENST00000563829 PDE3BQ13370 1112 aa16.09■□□□□ 0.17
SCAMP2-204ENST00000563829 SLKQ9H2G2 1235 aaPredicted RBP16.09■□□□□ 0.17
SCAMP2-204ENST00000563829 TEX14Q8IWB6 1497 aa16.09■□□□□ 0.17
SCAMP2-204ENST00000563829 MIA2Q96PC5 1412 aa16.08■□□□□ 0.16
SCAMP2-204ENST00000563829 BRD4O60885 1362 aaPredicted RBP16.08■□□□□ 0.16
SCAMP2-204ENST00000563829 KTN1Q86UP2 1357 aaKnown RBP16.08■□□□□ 0.16
SCAMP2-204ENST00000563829 L1TD1Q5T7N2 865 aaKnown RBP16.08■□□□□ 0.16
SCAMP2-204ENST00000563829 KIF15Q9NS87 1388 aa16.07■□□□□ 0.16
SCAMP2-204ENST00000563829 BCORL1Q5H9F3 1711 aa16.07■□□□□ 0.16
SCAMP2-204ENST00000563829 CENPQQ7L2Z9 268 aaPredicted RBP16.06■□□□□ 0.16
SCAMP2-204ENST00000563829 KDM2BQ8NHM5 1336 aa16.05■□□□□ 0.16
SCAMP2-204ENST00000563829 RRP9O43818 475 aaKnown RBP16.04■□□□□ 0.16
SCAMP2-204ENST00000563829 RALBP1Q15311 655 aa16.04■□□□□ 0.16
SCAMP2-204ENST00000563829 ARID4BQ4LE39 1312 aaPredicted RBP16.03■□□□□ 0.16
SCAMP2-204ENST00000563829 SNAPC4Q5SXM2 1469 aa16.03■□□□□ 0.16
SCAMP2-204ENST00000563829 EFCAB5A4FU69 1503 aa16.03■□□□□ 0.16
SCAMP2-204ENST00000563829 GZF1Q9H116 711 aaPredicted RBP16.02■□□□□ 0.15
SCAMP2-204ENST00000563829 GCC2Q8IWJ2 1684 aa16.01■□□□□ 0.15
SCAMP2-204ENST00000563829 PANK2Q9BZ23 570 aa16.01■□□□□ 0.15
SCAMP2-204ENST00000563829 XRCC6P12956 609 aaKnown RBP eCLIP16.01■□□□□ 0.15
SCAMP2-204ENST00000563829 SUPT6HQ7KZ85 1726 aaKnown RBP16■□□□□ 0.15
SCAMP2-204ENST00000563829 NLRP13Q86W25 1043 aa16■□□□□ 0.15
SCAMP2-204ENST00000563829 ROCK2O75116 1388 aaKnown RBP16■□□□□ 0.15
SCAMP2-204ENST00000563829 CARD11Q9BXL7 1154 aa16■□□□□ 0.15
SCAMP2-204ENST00000563829 ARID3CA6NKF2 412 aa15.99■□□□□ 0.15
SCAMP2-204ENST00000563829 GOLGA6L3A6NEY3 463 aa15.99■□□□□ 0.15
SCAMP2-204ENST00000563829 CLCN1P35523 988 aa15.99■□□□□ 0.15
SCAMP2-204ENST00000563829 PODXL2Q9NZ53 605 aa15.98■□□□□ 0.15
SCAMP2-204ENST00000563829 ST20-MTHFSA0A0A6YYL1 179 aa15.97■□□□□ 0.15
SCAMP2-204ENST00000563829 PLEKHG5O94827 1062 aa15.96■□□□□ 0.15
SCAMP2-204ENST00000563829 BECN1Q14457 450 aa15.96■□□□□ 0.15
SCAMP2-204ENST00000563829 UGGT2Q9NYU1 1516 aa15.95■□□□□ 0.14
SCAMP2-204ENST00000563829 LRRIQ1Q96JM4 1722 aa15.95■□□□□ 0.14
SCAMP2-204ENST00000563829 SEC24BO95487 1268 aa15.94■□□□□ 0.14
SCAMP2-204ENST00000563829 CC2D1BQ5T0F9 858 aaKnown RBP15.94■□□□□ 0.14
SCAMP2-204ENST00000563829 KDM2AQ9Y2K7 1162 aa15.94■□□□□ 0.14
SCAMP2-204ENST00000563829 SPRYD3Q8NCJ5 442 aa15.94■□□□□ 0.14
SCAMP2-204ENST00000563829 EHBP1L1Q8N3D4 1523 aa15.94■□□□□ 0.14
SCAMP2-204ENST00000563829 USP19O94966 1318 aa15.92■□□□□ 0.14
SCAMP2-204ENST00000563829 TCOF1Q13428 1488 aaKnown RBP15.91■□□□□ 0.14
SCAMP2-204ENST00000563829 MAGI3Q5TCQ9 1506 aa15.9■□□□□ 0.14
SCAMP2-204ENST00000563829 KDM5CP41229 1560 aa15.9■□□□□ 0.14
SCAMP2-204ENST00000563829 GRIN2BQ13224 1484 aa15.89■□□□□ 0.13
SCAMP2-204ENST00000563829 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.87■□□□□ 0.13
SCAMP2-204ENST00000563829 FSD2A1L4K1 749 aa15.87■□□□□ 0.13
SCAMP2-204ENST00000563829 ANTXR1Q9H6X2 564 aa15.87■□□□□ 0.13
SCAMP2-204ENST00000563829 PKD2Q13563 968 aa15.87■□□□□ 0.13
SCAMP2-204ENST00000563829 PARD3Q8TEW0 1356 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms