RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ANKRD30BQ9BXX2 1392 aa18.21■□□□□ 0.51
USB1-207ENST00000563149 CNTLNQ9NXG0 1405 aa18.21■□□□□ 0.51
USB1-207ENST00000563149 NUP153P49790 1475 aaKnown RBP18.21■□□□□ 0.5
USB1-207ENST00000563149 L3MBTL2Q969R5 705 aa18.19■□□□□ 0.5
USB1-207ENST00000563149 GRIN2AQ12879 1464 aa18.19■□□□□ 0.5
USB1-207ENST00000563149 NCOA1Q15788 1441 aa18.18■□□□□ 0.5
USB1-207ENST00000563149 ZNF608Q9ULD9 1512 aaPredicted RBP18.18■□□□□ 0.5
USB1-207ENST00000563149 BCANQ96GW7 911 aa18.17■□□□□ 0.5
USB1-207ENST00000563149 ITSN2Q9NZM3 1697 aa18.16■□□□□ 0.5
USB1-207ENST00000563149 TEX14Q8IWB6 1497 aa18.16■□□□□ 0.5
USB1-207ENST00000563149 TROQ12816 1431 aaPredicted RBP18.15■□□□□ 0.5
USB1-207ENST00000563149 POLR1AO95602 1720 aaPredicted RBP18.15■□□□□ 0.5
USB1-207ENST00000563149 CCDC7Q96M83 1385 aa18.14■□□□□ 0.5
USB1-207ENST00000563149 ADCY10Q96PN6 1610 aa18.14■□□□□ 0.49
USB1-207ENST00000563149 ADGBQ8N7X0 1667 aa18.13■□□□□ 0.49
USB1-207ENST00000563149 EIF4G3O43432 1585 aaKnown RBP18.13■□□□□ 0.49
USB1-207ENST00000563149 MAGI1Q96QZ7 1491 aaPredicted RBP18.12■□□□□ 0.49
USB1-207ENST00000563149 HNRNPUQ00839 825 aaKnown RBP eCLIP18.12■□□□□ 0.49
USB1-207ENST00000563149 ERICH6BQ5W0A0 696 aa18.12■□□□□ 0.49
USB1-207ENST00000563149 ADGRL2O95490 1459 aa18.11■□□□□ 0.49
USB1-207ENST00000563149 SPATA31E1Q6ZUB1 1445 aa18.1■□□□□ 0.49
USB1-207ENST00000563149 SLC4A1APQ9BWU0 796 aaKnown RBP18.09■□□□□ 0.49
USB1-207ENST00000563149 CAMSAP2Q08AD1 1489 aa18.09■□□□□ 0.49
USB1-207ENST00000563149 ARID3CA6NKF2 412 aa18.08■□□□□ 0.48
USB1-207ENST00000563149 PZPP20742 1482 aa18.07■□□□□ 0.48
USB1-207ENST00000563149 FOXD1Q16676 465 aa18.07■□□□□ 0.48
USB1-207ENST00000563149 NBPF8Q3BBV2 869 aa18.07■□□□□ 0.48
USB1-207ENST00000563149 PRKRIP1Q9H875 184 aaPredicted RBP18.07■□□□□ 0.48
USB1-207ENST00000563149 CROCC2H7BZ55 1655 aa18.07■□□□□ 0.48
USB1-207ENST00000563149 ZNF644Q9H582 1327 aaPredicted RBP18.07■□□□□ 0.48
USB1-207ENST00000563149 GPATCH8Q9UKJ3 1502 aaKnown RBP18.06■□□□□ 0.48
USB1-207ENST00000563149 SYNJ2O15056 1496 aa18.06■□□□□ 0.48
USB1-207ENST00000563149 PRG4Q92954 1404 aaPredicted RBP18.05■□□□□ 0.48
USB1-207ENST00000563149 CFDP1Q9UEE9 299 aaPredicted RBP18.05■□□□□ 0.48
USB1-207ENST00000563149 CARMIL2Q6F5E8 1435 aa18.05■□□□□ 0.48
USB1-207ENST00000563149 C11orf95C9JLR9 678 aaPredicted RBP18.04■□□□□ 0.48
USB1-207ENST00000563149 ANP32EQ9BTT0 268 aa18.04■□□□□ 0.48
USB1-207ENST00000563149 KIAA1107Q9UPP5 1409 aa18.03■□□□□ 0.48
USB1-207ENST00000563149 CEP170Q5SW79 1584 aa18.03■□□□□ 0.48
USB1-207ENST00000563149 MBD5Q9P267 1494 aa18.03■□□□□ 0.48
USB1-207ENST00000563149 ANKRD30AQ9BXX3 1397 aa18.02■□□□□ 0.47
USB1-207ENST00000563149 KIF7Q2M1P5 1343 aa18.01■□□□□ 0.47
USB1-207ENST00000563149 ARID4BQ4LE39 1312 aaPredicted RBP18.01■□□□□ 0.47
USB1-207ENST00000563149 RBM19Q9Y4C8 960 aaKnown RBP18■□□□□ 0.47
USB1-207ENST00000563149 NUP160Q12769 1436 aa18■□□□□ 0.47
USB1-207ENST00000563149 PLB1Q6P1J6 1458 aa17.99■□□□□ 0.47
USB1-207ENST00000563149 CHMP7Q8WUX9 453 aaPredicted RBP17.99■□□□□ 0.47
USB1-207ENST00000563149 KIF14Q15058 1648 aa17.99■□□□□ 0.47
USB1-207ENST00000563149 SHANK2Q9UPX8 1470 aa17.99■□□□□ 0.47
USB1-207ENST00000563149 ZBED9Q6R2W3 1325 aa17.99■□□□□ 0.47
USB1-207ENST00000563149 MRS2Q9HD23 443 aa17.96■□□□□ 0.47
USB1-207ENST00000563149 ABCA8O94911 1581 aa17.95■□□□□ 0.46
USB1-207ENST00000563149 CCDC184Q52MB2 194 aa17.95■□□□□ 0.46
USB1-207ENST00000563149 UHRF1BP1Q6BDS2 1440 aa17.95■□□□□ 0.46
USB1-207ENST00000563149 KDM5DQ9BY66 1539 aa17.94■□□□□ 0.46
USB1-207ENST00000563149 ANKRD50Q9ULJ7 1429 aa17.94■□□□□ 0.46
USB1-207ENST00000563149 JPH4Q96JJ6 628 aa17.94■□□□□ 0.46
USB1-207ENST00000563149 ABCC10Q5T3U5 1492 aa17.93■□□□□ 0.46
USB1-207ENST00000563149 CDC42BPAQ5VT25 1732 aa17.93■□□□□ 0.46
USB1-207ENST00000563149 PPP4R2Q9NY27 417 aa17.93■□□□□ 0.46
USB1-207ENST00000563149 ERCC6Q03468 1493 aa17.93■□□□□ 0.46
USB1-207ENST00000563149 PLEKHD1A6NEE1 506 aa17.92■□□□□ 0.46
USB1-207ENST00000563149 KDM5CP41229 1560 aa17.92■□□□□ 0.46
USB1-207ENST00000563149 PKD2Q13563 968 aa17.91■□□□□ 0.46
USB1-207ENST00000563149 ARHGEF12Q9NZN5 1544 aa17.91■□□□□ 0.46
USB1-207ENST00000563149 FAM9BQ8IZU0 186 aa17.91■□□□□ 0.46
USB1-207ENST00000563149 ROCK2O75116 1388 aaKnown RBP17.9■□□□□ 0.46
USB1-207ENST00000563149 USP47Q96K76 1375 aa17.9■□□□□ 0.46
USB1-207ENST00000563149 ZNF777Q9ULD5 760 aaPredicted RBP17.9■□□□□ 0.46
USB1-207ENST00000563149 DHX29Q7Z478 1369 aaKnown RBP17.9■□□□□ 0.46
USB1-207ENST00000563149 RALGAPBQ86X10 1494 aa17.89■□□□□ 0.46
USB1-207ENST00000563149 ARHGEF5Q12774 1597 aa17.89■□□□□ 0.45
USB1-207ENST00000563149 ATP10BO94823 1461 aa17.88■□□□□ 0.45
USB1-207ENST00000563149 C9orf84Q5VXU9 1444 aa17.88■□□□□ 0.45
USB1-207ENST00000563149 BCORL1Q5H9F3 1711 aa17.88■□□□□ 0.45
USB1-207ENST00000563149 PTPRGP23470 1445 aa17.85■□□□□ 0.45
USB1-207ENST00000563149 TSPY4P0CV99 314 aa17.85■□□□□ 0.45
USB1-207ENST00000563149 TSPY10P0CW01 314 aa17.85■□□□□ 0.45
USB1-207ENST00000563149 FANCIQ9NVI1 1328 aa17.85■□□□□ 0.45
USB1-207ENST00000563149 NUP155O75694 1391 aa17.84■□□□□ 0.45
USB1-207ENST00000563149 SMG6Q86US8 1419 aaKnown RBP17.83■□□□□ 0.44
USB1-207ENST00000563149 IRX6P78412 446 aaPredicted RBP17.82■□□□□ 0.44
USB1-207ENST00000563149 FBLN2P98095 1184 aa17.82■□□□□ 0.44
USB1-207ENST00000563149 RSPH4AQ5TD94 716 aa17.82■□□□□ 0.44
USB1-207ENST00000563149 KTN1Q86UP2 1357 aaKnown RBP17.81■□□□□ 0.44
USB1-207ENST00000563149 KIF15Q9NS87 1388 aa17.78■□□□□ 0.44
USB1-207ENST00000563149 CARD11Q9BXL7 1154 aa17.77■□□□□ 0.44
USB1-207ENST00000563149 CCDC141Q6ZP82 1450 aa17.77■□□□□ 0.44
USB1-207ENST00000563149 ZNF326Q5BKZ1 582 aaKnown RBP17.76■□□□□ 0.43
USB1-207ENST00000563149 PREX2Q70Z35 1606 aa17.76■□□□□ 0.43
USB1-207ENST00000563149 NUDCQ9Y266 331 aa17.76■□□□□ 0.43
USB1-207ENST00000563149 RNF123Q5XPI4 1314 aa17.75■□□□□ 0.43
USB1-207ENST00000563149 MAST1Q9Y2H9 1570 aa17.74■□□□□ 0.43
USB1-207ENST00000563149 SAMD9LQ8IVG5 1584 aa17.73■□□□□ 0.43
USB1-207ENST00000563149 PNISRQ8TF01 805 aaKnown RBP17.73■□□□□ 0.43
USB1-207ENST00000563149 CDC42BPBQ9Y5S2 1711 aa17.73■□□□□ 0.43
USB1-207ENST00000563149 E9PCH4 1651 aa17.73■□□□□ 0.43
USB1-207ENST00000563149 RALBP1Q15311 655 aa17.72■□□□□ 0.43
USB1-207ENST00000563149 BRD4O60885 1362 aaPredicted RBP17.72■□□□□ 0.43
USB1-207ENST00000563149 FAM135AQ9P2D6 1515 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms