RNA–Protein interactions for RNA: ENST00000562510.1

SNX29-201, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-201ENST00000562510 ERCC6L2Q5T890 1561 aa12.05□□□□□ -0.48
SNX29-201ENST00000562510 ZNF579Q8NAF0 562 aaKnown RBP12.05□□□□□ -0.48
SNX29-201ENST00000562510 JPH4Q96JJ6 628 aa12.05□□□□□ -0.48
SNX29-201ENST00000562510 PHF12Q96QT6 1004 aa12.05□□□□□ -0.48
SNX29-201ENST00000562510 FAM69CQ0P6D2 419 aa12.03□□□□□ -0.48
SNX29-201ENST00000562510 PRG4Q92954 1404 aaPredicted RBP12.03□□□□□ -0.48
SNX29-201ENST00000562510 PBRM1Q86U86 1689 aa12.02□□□□□ -0.49
SNX29-201ENST00000562510 CUL7Q14999 1698 aa12.01□□□□□ -0.49
SNX29-201ENST00000562510 ADAMTS12P58397 1594 aa12.01□□□□□ -0.49
SNX29-201ENST00000562510 GABBR2O75899 941 aa12□□□□□ -0.49
SNX29-201ENST00000562510 CCDC61Q9Y6R9 512 aa12□□□□□ -0.49
SNX29-201ENST00000562510 ABCC10Q5T3U5 1492 aa12□□□□□ -0.49
SNX29-201ENST00000562510 SHROOM2Q13796 1616 aa12□□□□□ -0.49
SNX29-201ENST00000562510 CIZ1Q9ULV3 898 aaPredicted RBP11.99□□□□□ -0.49
SNX29-201ENST00000562510 GSE1Q14687 1217 aa11.98□□□□□ -0.49
SNX29-201ENST00000562510 CEP162Q5TB80 1403 aa11.96□□□□□ -0.49
SNX29-201ENST00000562510 KDM4FA0A1W2PPD8 638 aa11.95□□□□□ -0.5
SNX29-201ENST00000562510 CLCN6P51797 869 aa11.95□□□□□ -0.5
SNX29-201ENST00000562510 MAPKBP1O60336 1514 aa11.93□□□□□ -0.5
SNX29-201ENST00000562510 PYGBP11216 843 aa11.91□□□□□ -0.5
SNX29-201ENST00000562510 CLIP1P30622 1438 aa11.91□□□□□ -0.5
SNX29-201ENST00000562510 KIF12Q96FN5 646 aa11.9□□□□□ -0.5
SNX29-201ENST00000562510 MAP3K13O43283 966 aa11.89□□□□□ -0.51
SNX29-201ENST00000562510 GALR2O43603 387 aaPredicted RBP11.89□□□□□ -0.51
SNX29-201ENST00000562510 MS4A3Q96HJ5 214 aa11.88□□□□□ -0.51
SNX29-201ENST00000562510 KIAA0586Q9BVV6 1533 aa11.87□□□□□ -0.51
SNX29-201ENST00000562510 RANGAP1P46060 587 aaPredicted RBP11.87□□□□□ -0.51
SNX29-201ENST00000562510 ILDR1Q86SU0 546 aaPredicted RBP11.87□□□□□ -0.51
SNX29-201ENST00000562510 KIF13AQ9H1H9 1805 aa11.86□□□□□ -0.51
SNX29-201ENST00000562510 PCDHB13Q9Y5F0 798 aa11.86□□□□□ -0.51
SNX29-201ENST00000562510 DIP2BQ9P265 1576 aa11.85□□□□□ -0.51
SNX29-201ENST00000562510 DCBLD2Q96PD2 775 aa11.84□□□□□ -0.51
SNX29-201ENST00000562510 PTPRGP23470 1445 aa11.84□□□□□ -0.51
SNX29-201ENST00000562510 CTTNBP2Q8WZ74 1663 aa11.83□□□□□ -0.52
SNX29-201ENST00000562510 ARHGAP35Q9NRY4 1499 aa11.83□□□□□ -0.52
SNX29-201ENST00000562510 KDM6BO15054 1643 aa11.82□□□□□ -0.52
SNX29-201ENST00000562510 ADCY10Q96PN6 1610 aa11.82□□□□□ -0.52
SNX29-201ENST00000562510 VPS8Q8N3P4 1428 aa11.79□□□□□ -0.52
SNX29-201ENST00000562510 PLB1Q6P1J6 1458 aa11.79□□□□□ -0.52
SNX29-201ENST00000562510 SGIP1Q9BQI5 828 aa11.79□□□□□ -0.52
SNX29-201ENST00000562510 IQGAP2Q13576 1575 aa11.79□□□□□ -0.52
SNX29-201ENST00000562510 EFCAB5A4FU69 1503 aa11.78□□□□□ -0.52
SNX29-201ENST00000562510 CARMIL2Q6F5E8 1435 aa11.77□□□□□ -0.52
SNX29-201ENST00000562510 ABCC2Q92887 1545 aa11.77□□□□□ -0.52
SNX29-201ENST00000562510 IFNL1Q8IU54 200 aa11.77□□□□□ -0.53
SNX29-201ENST00000562510 CHRM1P11229 460 aaPredicted RBP11.76□□□□□ -0.53
SNX29-201ENST00000562510 P3H3Q8IVL6 736 aa11.76□□□□□ -0.53
SNX29-201ENST00000562510 PCDHB8Q9UN66 801 aa11.76□□□□□ -0.53
SNX29-201ENST00000562510 ASXL2Q76L83 1435 aa11.76□□□□□ -0.53
SNX29-201ENST00000562510 UGGT2Q9NYU1 1516 aa11.76□□□□□ -0.53
SNX29-201ENST00000562510 SAMD9Q5K651 1589 aa11.75□□□□□ -0.53
SNX29-201ENST00000562510 UHRF1BP1LA0JNW5 1464 aa11.74□□□□□ -0.53
SNX29-201ENST00000562510 GLI2P10070 1586 aa11.73□□□□□ -0.53
SNX29-201ENST00000562510 FHOD3Q2V2M9 1422 aa11.73□□□□□ -0.53
SNX29-201ENST00000562510 ZNF467Q7Z7K2 595 aaPredicted RBP11.73□□□□□ -0.53
SNX29-201ENST00000562510 TRPC6Q9Y210 931 aa11.73□□□□□ -0.53
SNX29-201ENST00000562510 ADGRL1O94910 1474 aa11.72□□□□□ -0.53
SNX29-201ENST00000562510 UACAQ9BZF9 1416 aa11.72□□□□□ -0.53
SNX29-201ENST00000562510 TTBK1Q5TCY1 1321 aaPredicted RBP11.72□□□□□ -0.53
SNX29-201ENST00000562510 ECM2O94769 699 aaPredicted RBP11.71□□□□□ -0.53
SNX29-201ENST00000562510 DISP1Q96F81 1524 aa11.7□□□□□ -0.54
SNX29-201ENST00000562510 POTEIP0CG38 1075 aa11.7□□□□□ -0.54
SNX29-201ENST00000562510 COL17A1Q9UMD9 1497 aaPredicted RBP11.7□□□□□ -0.54
SNX29-201ENST00000562510 FMN1Q68DA7 1419 aa11.69□□□□□ -0.54
SNX29-201ENST00000562510 TEX14Q8IWB6 1497 aa11.69□□□□□ -0.54
SNX29-201ENST00000562510 TIE1P35590 1138 aa11.68□□□□□ -0.54
SNX29-201ENST00000562510 PKD2Q13563 968 aa11.68□□□□□ -0.54
SNX29-201ENST00000562510 EPRSP07814 1512 aaKnown RBP11.67□□□□□ -0.54
SNX29-201ENST00000562510 BMP2KQ9NSY1 1161 aaPredicted RBP11.67□□□□□ -0.54
SNX29-201ENST00000562510 KIAA0556O60303 1618 aa11.67□□□□□ -0.54
SNX29-201ENST00000562510 KDM5BQ9UGL1 1544 aa11.66□□□□□ -0.54
SNX29-201ENST00000562510 ATMINO43313 823 aaPredicted RBP11.66□□□□□ -0.54
SNX29-201ENST00000562510 TMEM106CQ9BVX2 250 aa11.66□□□□□ -0.54
SNX29-201ENST00000562510 CASKIN1Q8WXD9 1431 aa11.66□□□□□ -0.54
SNX29-201ENST00000562510 PPARGC1BQ86YN6 1023 aaKnown RBP11.65□□□□□ -0.54
SNX29-201ENST00000562510 TTLL13PA6NNM8 815 aa11.64□□□□□ -0.55
SNX29-201ENST00000562510 ASTLQ6HA08 431 aaPredicted RBP11.64□□□□□ -0.55
SNX29-201ENST00000562510 FYCO1Q9BQS8 1478 aa11.63□□□□□ -0.55
SNX29-201ENST00000562510 ATN1P54259 1190 aaPredicted RBP11.63□□□□□ -0.55
SNX29-201ENST00000562510 TSPOAP1O95153 1857 aa11.63□□□□□ -0.55
SNX29-201ENST00000562510 PCF11O94913 1555 aaKnown RBP11.62□□□□□ -0.55
SNX29-201ENST00000562510 MAP3K1Q13233 1512 aa11.62□□□□□ -0.55
SNX29-201ENST00000562510 RIOK3O14730 519 aaKnown RBP11.62□□□□□ -0.55
SNX29-201ENST00000562510 PSEN1P49768 467 aa11.62□□□□□ -0.55
SNX29-201ENST00000562510 PDAP1Q13442 181 aaKnown RBP11.62□□□□□ -0.55
SNX29-201ENST00000562510 ATP1B4Q9UN42 357 aaPredicted RBP11.61□□□□□ -0.55
SNX29-201ENST00000562510 PPRC1Q5VV67 1664 aaKnown RBP11.6□□□□□ -0.55
SNX29-201ENST00000562510 HECW2Q9P2P5 1572 aa11.6□□□□□ -0.55
SNX29-201ENST00000562510 TRIM26Q12899 539 aaPredicted RBP11.6□□□□□ -0.55
SNX29-201ENST00000562510 KANK4Q5T7N3 995 aaPredicted RBP11.6□□□□□ -0.55
SNX29-201ENST00000562510 WDR7Q9Y4E6 1490 aa11.59□□□□□ -0.55
SNX29-201ENST00000562510 PELP1Q8IZL8 1130 aaKnown RBP11.59□□□□□ -0.55
SNX29-201ENST00000562510 FBXO41Q8TF61 875 aa11.59□□□□□ -0.55
SNX29-201ENST00000562510 RNF25Q96BH1 459 aaPredicted RBP11.59□□□□□ -0.55
SNX29-201ENST00000562510 TRIM35Q9UPQ4 493 aa11.58□□□□□ -0.56
SNX29-201ENST00000562510 MAGI3Q5TCQ9 1506 aa11.58□□□□□ -0.56
SNX29-201ENST00000562510 CD109Q6YHK3 1445 aa11.58□□□□□ -0.56
SNX29-201ENST00000562510 MAP3K4Q9Y6R4 1608 aa11.57□□□□□ -0.56
SNX29-201ENST00000562510 TIAM1Q13009 1591 aa11.57□□□□□ -0.56
SNX29-201ENST00000562510 RGL2O15211 777 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms