RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 CDC42BPAQ5VT25 1732 aa14.12□□□□□ -0.15
CDH13-205ENST00000562307 CAMSAP2Q08AD1 1489 aa14.12□□□□□ -0.15
CDH13-205ENST00000562307 ROCK1Q13464 1354 aa14.12□□□□□ -0.15
CDH13-205ENST00000562307 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.11□□□□□ -0.15
CDH13-205ENST00000562307 ACIN1Q9UKV3 1341 aaKnown RBP14.08□□□□□ -0.16
CDH13-205ENST00000562307 PREX2Q70Z35 1606 aa14.08□□□□□ -0.16
CDH13-205ENST00000562307 WDR7Q9Y4E6 1490 aa14.07□□□□□ -0.16
CDH13-205ENST00000562307 CHIC2Q9UKJ5 165 aa14.07□□□□□ -0.16
CDH13-205ENST00000562307 ZNF777Q9ULD5 760 aaPredicted RBP14.07□□□□□ -0.16
CDH13-205ENST00000562307 TTC37Q6PGP7 1564 aa14.07□□□□□ -0.16
CDH13-205ENST00000562307 PLCH2O75038 1416 aa14.07□□□□□ -0.16
CDH13-205ENST00000562307 RSPH4AQ5TD94 716 aa14.06□□□□□ -0.16
CDH13-205ENST00000562307 KCNH8Q96L42 1107 aa14.06□□□□□ -0.16
CDH13-205ENST00000562307 CDC42BPBQ9Y5S2 1711 aa14.06□□□□□ -0.16
CDH13-205ENST00000562307 ADGRL2O95490 1459 aa14.06□□□□□ -0.16
CDH13-205ENST00000562307 MBD5Q9P267 1494 aa14.06□□□□□ -0.16
CDH13-205ENST00000562307 ARHGEF5Q12774 1597 aa14.05□□□□□ -0.16
CDH13-205ENST00000562307 GCC2Q8IWJ2 1684 aa14.05□□□□□ -0.16
CDH13-205ENST00000562307 RRP7BPQ9NSQ0 103 aa14.05□□□□□ -0.16
CDH13-205ENST00000562307 SHANK2Q9UPX8 1470 aa14.05□□□□□ -0.16
CDH13-205ENST00000562307 KIAA1107Q9UPP5 1409 aa14.04□□□□□ -0.16
CDH13-205ENST00000562307 ARAP3Q8WWN8 1544 aa14.04□□□□□ -0.16
CDH13-205ENST00000562307 NPM1P06748 294 aaKnown RBP eCLIP14.03□□□□□ -0.16
CDH13-205ENST00000562307 NCOA1Q15788 1441 aa14.03□□□□□ -0.16
CDH13-205ENST00000562307 ASXL2Q76L83 1435 aa14.03□□□□□ -0.16
CDH13-205ENST00000562307 PLEKHH2Q8IVE3 1493 aa14.03□□□□□ -0.16
CDH13-205ENST00000562307 SAMD9LQ8IVG5 1584 aa14.03□□□□□ -0.16
CDH13-205ENST00000562307 MAPKBP1O60336 1514 aa14.02□□□□□ -0.16
CDH13-205ENST00000562307 MYO5CQ9NQX4 1742 aa14.01□□□□□ -0.17
CDH13-205ENST00000562307 CROCC2H7BZ55 1655 aa14.01□□□□□ -0.17
CDH13-205ENST00000562307 ARHGAP5Q13017 1502 aa14.01□□□□□ -0.17
CDH13-205ENST00000562307 EFCAB2Q5VUJ9 269 aa14.01□□□□□ -0.17
CDH13-205ENST00000562307 ANKRD30AQ9BXX3 1397 aa14□□□□□ -0.17
CDH13-205ENST00000562307 HNRNPMP52272 730 aaKnown RBP eCLIP14□□□□□ -0.17
CDH13-205ENST00000562307 TSPY4P0CV99 314 aa13.99□□□□□ -0.17
CDH13-205ENST00000562307 TSPY10P0CW01 314 aa13.99□□□□□ -0.17
CDH13-205ENST00000562307 ABCA9Q8IUA7 1624 aa13.99□□□□□ -0.17
CDH13-205ENST00000562307 CCDC141Q6ZP82 1450 aa13.99□□□□□ -0.17
CDH13-205ENST00000562307 C9orf84Q5VXU9 1444 aa13.98□□□□□ -0.17
CDH13-205ENST00000562307 ADGBQ8N7X0 1667 aa13.98□□□□□ -0.17
CDH13-205ENST00000562307 RIMBP3CA6NJZ7 1639 aa13.97□□□□□ -0.17
CDH13-205ENST00000562307 RIMBP3BA6NNM3 1639 aa13.97□□□□□ -0.17
CDH13-205ENST00000562307 KDM6BO15054 1643 aa13.97□□□□□ -0.17
CDH13-205ENST00000562307 RIMBP3Q9UFD9 1639 aa13.97□□□□□ -0.17
CDH13-205ENST00000562307 MAST1Q9Y2H9 1570 aa13.96□□□□□ -0.17
CDH13-205ENST00000562307 SYCP2Q9BX26 1530 aa13.95□□□□□ -0.18
CDH13-205ENST00000562307 ARHGEF12Q9NZN5 1544 aa13.95□□□□□ -0.18
CDH13-205ENST00000562307 TIMELESSQ9UNS1 1208 aa13.94□□□□□ -0.18
CDH13-205ENST00000562307 CYB5RLQ6IPT4 315 aa13.93□□□□□ -0.18
CDH13-205ENST00000562307 ABCC1P33527 1531 aa13.93□□□□□ -0.18
CDH13-205ENST00000562307 ANKRD50Q9ULJ7 1429 aa13.91□□□□□ -0.18
CDH13-205ENST00000562307 TRIM52Q96A61 297 aa13.91□□□□□ -0.18
CDH13-205ENST00000562307 MPHOSPH9Q99550 1183 aa13.91□□□□□ -0.18
CDH13-205ENST00000562307 DENND4BO75064 1496 aaPredicted RBP13.91□□□□□ -0.18
CDH13-205ENST00000562307 KIF15Q9NS87 1388 aa13.9□□□□□ -0.18
CDH13-205ENST00000562307 FANCAO15360 1455 aa13.9□□□□□ -0.18
CDH13-205ENST00000562307 RTEL1-TNFRSF6BF6WH68 1400 aa13.89□□□□□ -0.19
CDH13-205ENST00000562307 TRAPPC8Q9Y2L5 1435 aa13.89□□□□□ -0.19
CDH13-205ENST00000562307 SIN3AQ96ST3 1273 aa13.88□□□□□ -0.19
CDH13-205ENST00000562307 CD109Q6YHK3 1445 aa13.88□□□□□ -0.19
CDH13-205ENST00000562307 PLXNC1O60486 1568 aa13.88□□□□□ -0.19
CDH13-205ENST00000562307 PZPP20742 1482 aa13.86□□□□□ -0.19
CDH13-205ENST00000562307 GLI2P10070 1586 aa13.85□□□□□ -0.19
CDH13-205ENST00000562307 KDM5DQ9BY66 1539 aa13.85□□□□□ -0.19
CDH13-205ENST00000562307 SCAPERQ9BY12 1400 aa13.84□□□□□ -0.19
CDH13-205ENST00000562307 ADGRL1O94910 1474 aa13.83□□□□□ -0.2
CDH13-205ENST00000562307 SLC4A1APQ9BWU0 796 aaKnown RBP13.83□□□□□ -0.2
CDH13-205ENST00000562307 DUOX2Q9NRD8 1548 aa13.83□□□□□ -0.2
CDH13-205ENST00000562307 SPAG9O60271 1321 aaKnown RBP13.83□□□□□ -0.2
CDH13-205ENST00000562307 CFAP74Q9C0B2 1584 aa13.83□□□□□ -0.2
CDH13-205ENST00000562307 ANKRD30BQ9BXX2 1392 aa13.83□□□□□ -0.2
CDH13-205ENST00000562307 NEUROD1Q13562 356 aa13.82□□□□□ -0.2
CDH13-205ENST00000562307 AFAP1Q8N556 730 aa13.82□□□□□ -0.2
CDH13-205ENST00000562307 NEO1Q92859 1461 aa13.81□□□□□ -0.2
CDH13-205ENST00000562307 ERBINQ96RT1 1412 aa13.81□□□□□ -0.2
CDH13-205ENST00000562307 PPP1R15AO75807 674 aaPredicted RBP13.8□□□□□ -0.2
CDH13-205ENST00000562307 NUP155O75694 1391 aa13.8□□□□□ -0.2
CDH13-205ENST00000562307 ZFYVE16Q7Z3T8 1539 aa13.8□□□□□ -0.2
CDH13-205ENST00000562307 ZNF316A6NFI3 1004 aaPredicted RBP13.79□□□□□ -0.2
CDH13-205ENST00000562307 INO80Q9ULG1 1556 aaPredicted RBP13.79□□□□□ -0.2
CDH13-205ENST00000562307 MAP3K4Q9Y6R4 1608 aa13.79□□□□□ -0.2
CDH13-205ENST00000562307 UNC13BO14795 1591 aa13.77□□□□□ -0.21
CDH13-205ENST00000562307 ATP7AQ04656 1500 aa13.77□□□□□ -0.21
CDH13-205ENST00000562307 ZNF518AQ6AHZ1 1483 aa13.77□□□□□ -0.21
CDH13-205ENST00000562307 TONSLQ96HA7 1378 aa13.76□□□□□ -0.21
CDH13-205ENST00000562307 PKD2Q13563 968 aa13.76□□□□□ -0.21
CDH13-205ENST00000562307 FOXD1Q16676 465 aa13.76□□□□□ -0.21
CDH13-205ENST00000562307 MAGI2Q86UL8 1455 aa13.75□□□□□ -0.21
CDH13-205ENST00000562307 POGZQ7Z3K3 1410 aa13.75□□□□□ -0.21
CDH13-205ENST00000562307 KDM5CP41229 1560 aa13.75□□□□□ -0.21
CDH13-205ENST00000562307 DIP2BQ9P265 1576 aa13.75□□□□□ -0.21
CDH13-205ENST00000562307 RPRD2Q5VT52 1461 aaKnown RBP13.74□□□□□ -0.21
CDH13-205ENST00000562307 MLH3Q9UHC1 1453 aa13.74□□□□□ -0.21
CDH13-205ENST00000562307 DHX29Q7Z478 1369 aaKnown RBP13.74□□□□□ -0.21
CDH13-205ENST00000562307 FAM69CQ0P6D2 419 aa13.73□□□□□ -0.21
CDH13-205ENST00000562307 FAM135AQ9P2D6 1515 aa13.73□□□□□ -0.21
CDH13-205ENST00000562307 IQGAP3Q86VI3 1631 aa13.72□□□□□ -0.21
CDH13-205ENST00000562307 KIDINS220Q9ULH0 1771 aa13.71□□□□□ -0.21
CDH13-205ENST00000562307 DEPDC5O75140 1603 aa13.68□□□□□ -0.22
CDH13-205ENST00000562307 EIF2AK4Q9P2K8 1649 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms