RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 BAZ1BQ9UIG0 1483 aaKnown RBP14.31□□□□□ -0.12
RPAP1-204ENST00000562303 KIAA1211Q6ZU35 1233 aa14.3□□□□□ -0.12
RPAP1-204ENST00000562303 CHAF1AQ13111 956 aaPredicted RBP14.3□□□□□ -0.12
RPAP1-204ENST00000562303 L1TD1Q5T7N2 865 aaKnown RBP14.29□□□□□ -0.12
RPAP1-204ENST00000562303 RB1CC1Q8TDY2 1594 aa14.29□□□□□ -0.12
RPAP1-204ENST00000562303 EIF4G1Q04637 1599 aaKnown RBP14.29□□□□□ -0.12
RPAP1-204ENST00000562303 SPRYD3Q8NCJ5 442 aa14.28□□□□□ -0.12
RPAP1-204ENST00000562303 CFAP44Q96MT7 982 aa14.28□□□□□ -0.12
RPAP1-204ENST00000562303 KIAA2012Q0VF49 1180 aa14.27□□□□□ -0.13
RPAP1-204ENST00000562303 IPO8O15397 1037 aaKnown RBP14.26□□□□□ -0.13
RPAP1-204ENST00000562303 NOP58Q9Y2X3 529 aaKnown RBP14.26□□□□□ -0.13
RPAP1-204ENST00000562303 GORABQ5T7V8 394 aa14.25□□□□□ -0.13
RPAP1-204ENST00000562303 B4GALNT3Q6L9W6 998 aa14.25□□□□□ -0.13
RPAP1-204ENST00000562303 G3V3G9 751 aa14.25□□□□□ -0.13
RPAP1-204ENST00000562303 DCAF8Q5TAQ9 597 aa14.25□□□□□ -0.13
RPAP1-204ENST00000562303 CHMP3Q9Y3E7 222 aa14.24□□□□□ -0.13
RPAP1-204ENST00000562303 RTN4Q9NQC3 1192 aaKnown RBP14.24□□□□□ -0.13
RPAP1-204ENST00000562303 CEP164Q9UPV0 1460 aa14.24□□□□□ -0.13
RPAP1-204ENST00000562303 CALD1Q05682 793 aaKnown RBP14.23□□□□□ -0.13
RPAP1-204ENST00000562303 TAF7LQ5H9L4 462 aa14.23□□□□□ -0.13
RPAP1-204ENST00000562303 PRM3Q9NNZ6 103 aa14.23□□□□□ -0.13
RPAP1-204ENST00000562303 U2AF1L5P0DN76 240 aaPredicted RBP14.22□□□□□ -0.13
RPAP1-204ENST00000562303 U2AF1Q01081 240 aaKnown RBP eCLIP14.22□□□□□ -0.13
RPAP1-204ENST00000562303 MSNP26038 577 aaKnown RBP14.22□□□□□ -0.13
RPAP1-204ENST00000562303 ITPRIPQ8IWB1 547 aa14.2□□□□□ -0.14
RPAP1-204ENST00000562303 NOC3LQ8WTT2 800 aaKnown RBP14.2□□□□□ -0.14
RPAP1-204ENST00000562303 TNIKQ9UKE5 1360 aa14.2□□□□□ -0.14
RPAP1-204ENST00000562303 STK31Q9BXU1 1019 aa14.19□□□□□ -0.14
RPAP1-204ENST00000562303 FHAD1B1AJZ9 1412 aa14.19□□□□□ -0.14
RPAP1-204ENST00000562303 SPAG9O60271 1321 aaKnown RBP14.19□□□□□ -0.14
RPAP1-204ENST00000562303 CHMP4AQ9BY43 222 aa14.19□□□□□ -0.14
RPAP1-204ENST00000562303 KTN1Q86UP2 1357 aaKnown RBP14.19□□□□□ -0.14
RPAP1-204ENST00000562303 PKD2Q13563 968 aa14.18□□□□□ -0.14
RPAP1-204ENST00000562303 HTATSF1O43719 755 aaKnown RBP14.18□□□□□ -0.14
RPAP1-204ENST00000562303 GPATCH3Q96I76 525 aa14.17□□□□□ -0.14
RPAP1-204ENST00000562303 HSP90B1P14625 803 aaKnown RBP14.16□□□□□ -0.14
RPAP1-204ENST00000562303 EID1Q9Y6B2 187 aa14.16□□□□□ -0.14
RPAP1-204ENST00000562303 AMER1Q5JTC6 1135 aaPredicted RBP14.15□□□□□ -0.14
RPAP1-204ENST00000562303 GTF2E1P29083 439 aaPredicted RBP14.15□□□□□ -0.14
RPAP1-204ENST00000562303 RASSF8Q8NHQ8 419 aa14.15□□□□□ -0.14
RPAP1-204ENST00000562303 RWDD1Q9H446 243 aaPredicted RBP14.15□□□□□ -0.14
RPAP1-204ENST00000562303 HSPA5P11021 654 aaKnown RBP14.14□□□□□ -0.15
RPAP1-204ENST00000562303 PDE4CQ08493 712 aa14.14□□□□□ -0.15
RPAP1-204ENST00000562303 NGDNQ8NEJ9 315 aaKnown RBP14.14□□□□□ -0.15
RPAP1-204ENST00000562303 CARMIL1Q5VZK9 1371 aa14.14□□□□□ -0.15
RPAP1-204ENST00000562303 FRAT2O75474 233 aaPredicted RBP14.14□□□□□ -0.15
RPAP1-204ENST00000562303 HDAC5Q9UQL6 1122 aa14.13□□□□□ -0.15
RPAP1-204ENST00000562303 ROCK2O75116 1388 aaKnown RBP14.13□□□□□ -0.15
RPAP1-204ENST00000562303 TRIM6-TRIM34B2RNG4 842 aa14.13□□□□□ -0.15
RPAP1-204ENST00000562303 TPM4P67936 248 aa14.13□□□□□ -0.15
RPAP1-204ENST00000562303 CCDC34Q96HJ3 373 aa14.12□□□□□ -0.15
RPAP1-204ENST00000562303 GBP4Q96PP9 640 aa14.12□□□□□ -0.15
RPAP1-204ENST00000562303 FOXD1Q16676 465 aa14.12□□□□□ -0.15
RPAP1-204ENST00000562303 EFCAB2Q5VUJ9 269 aa14.12□□□□□ -0.15
RPAP1-204ENST00000562303 TOMM22Q9NS69 142 aa14.11□□□□□ -0.15
RPAP1-204ENST00000562303 VPS53Q5VIR6 699 aa14.11□□□□□ -0.15
RPAP1-204ENST00000562303 CARMIL2Q6F5E8 1435 aa14.11□□□□□ -0.15
RPAP1-204ENST00000562303 SLC4A10Q6U841 1118 aa14.11□□□□□ -0.15
RPAP1-204ENST00000562303 LTV1Q96GA3 475 aaPredicted RBP14.11□□□□□ -0.15
RPAP1-204ENST00000562303 CUX2O14529 1486 aa14.11□□□□□ -0.15
RPAP1-204ENST00000562303 AMPHP49418 695 aa14.11□□□□□ -0.15
RPAP1-204ENST00000562303 TERF2IPQ9NYB0 399 aa14.1□□□□□ -0.15
RPAP1-204ENST00000562303 HMMRO75330 724 aa14.1□□□□□ -0.15
RPAP1-204ENST00000562303 NUTM2DQ5VT03 806 aaPredicted RBP14.09□□□□□ -0.15
RPAP1-204ENST00000562303 PTMSP20962 102 aa14.09□□□□□ -0.15
RPAP1-204ENST00000562303 MARCH6O60337 910 aa14.09□□□□□ -0.15
RPAP1-204ENST00000562303 SMC4Q9NTJ3 1288 aa14.09□□□□□ -0.15
RPAP1-204ENST00000562303 CREBRFQ8IUR6 639 aa14.08□□□□□ -0.15
RPAP1-204ENST00000562303 EIF3AQ14152 1382 aaKnown RBP14.08□□□□□ -0.15
RPAP1-204ENST00000562303 KIF3BO15066 747 aa14.08□□□□□ -0.16
RPAP1-204ENST00000562303 SYAP1Q96A49 352 aaPredicted RBP14.08□□□□□ -0.16
RPAP1-204ENST00000562303 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.07□□□□□ -0.16
RPAP1-204ENST00000562303 NUTM2FA1L443 756 aa14.07□□□□□ -0.16
RPAP1-204ENST00000562303 TIMELESSQ9UNS1 1208 aa14.07□□□□□ -0.16
RPAP1-204ENST00000562303 NUP155O75694 1391 aa14.07□□□□□ -0.16
RPAP1-204ENST00000562303 A0A0U1RQG5 324 aaPredicted RBP14.07□□□□□ -0.16
RPAP1-204ENST00000562303 RCAN3Q9UKA8 241 aa14.07□□□□□ -0.16
RPAP1-204ENST00000562303 ARHGAP35Q9NRY4 1499 aa14.06□□□□□ -0.16
RPAP1-204ENST00000562303 RALBP1Q15311 655 aa14.06□□□□□ -0.16
RPAP1-204ENST00000562303 MFAP1P55081 439 aaKnown RBP14.05□□□□□ -0.16
RPAP1-204ENST00000562303 PMFBP1Q8TBY8 1022 aa14.05□□□□□ -0.16
RPAP1-204ENST00000562303 GZF1Q9H116 711 aaPredicted RBP14.05□□□□□ -0.16
RPAP1-204ENST00000562303 CCER2I3L3R5 266 aa14.05□□□□□ -0.16
RPAP1-204ENST00000562303 MSH5O43196 834 aa14.05□□□□□ -0.16
RPAP1-204ENST00000562303 CEP89Q96ST8 783 aa14.05□□□□□ -0.16
RPAP1-204ENST00000562303 NOL8Q76FK4 1167 aaKnown RBP14.05□□□□□ -0.16
RPAP1-204ENST00000562303 SETD5Q9C0A6 1442 aa14.04□□□□□ -0.16
RPAP1-204ENST00000562303 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.04□□□□□ -0.16
RPAP1-204ENST00000562303 SLKQ9H2G2 1235 aaPredicted RBP14.04□□□□□ -0.16
RPAP1-204ENST00000562303 LMOD3Q0VAK6 560 aa14.04□□□□□ -0.16
RPAP1-204ENST00000562303 WASHC2CQ9Y4E1 1318 aa14.04□□□□□ -0.16
RPAP1-204ENST00000562303 ANKRD30AQ9BXX3 1397 aa14.02□□□□□ -0.17
RPAP1-204ENST00000562303 CSPP1Q1MSJ5 1256 aa14.02□□□□□ -0.17
RPAP1-204ENST00000562303 EVA1CP58658 441 aa14.01□□□□□ -0.17
RPAP1-204ENST00000562303 MPHOSPH9Q99550 1183 aa14.01□□□□□ -0.17
RPAP1-204ENST00000562303 CCDC146Q8IYE0 955 aa14.01□□□□□ -0.17
RPAP1-204ENST00000562303 CLUAP1Q96AJ1 413 aa14.01□□□□□ -0.17
RPAP1-204ENST00000562303 CCDC180Q9P1Z9 1646 aa14□□□□□ -0.17
RPAP1-204ENST00000562303 ANO8Q9HCE9 1232 aaPredicted RBP14□□□□□ -0.17
RPAP1-204ENST00000562303 SF3A1Q15459 793 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms