RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 CFDP1Q9UEE9 299 aaPredicted RBP24.44■■□□□ 1.5
PKD1-225ENST00000562297 KDM5BQ9UGL1 1544 aa24.44■■□□□ 1.5
PKD1-225ENST00000562297 OSCARQ8IYS5 282 aa24.42■■□□□ 1.5
PKD1-225ENST00000562297 CHIC2Q9UKJ5 165 aa24.39■■□□□ 1.5
PKD1-225ENST00000562297 CDC42BPBQ9Y5S2 1711 aa24.39■■□□□ 1.5
PKD1-225ENST00000562297 CROCC2H7BZ55 1655 aa24.39■■□□□ 1.5
PKD1-225ENST00000562297 PREX2Q70Z35 1606 aa24.38■■□□□ 1.49
PKD1-225ENST00000562297 ROCK1Q13464 1354 aa24.38■■□□□ 1.49
PKD1-225ENST00000562297 TTC37Q6PGP7 1564 aa24.37■■□□□ 1.49
PKD1-225ENST00000562297 KDM6BO15054 1643 aa24.36■■□□□ 1.49
PKD1-225ENST00000562297 RRP7BPQ9NSQ0 103 aa24.36■■□□□ 1.49
PKD1-225ENST00000562297 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.35■■□□□ 1.49
PKD1-225ENST00000562297 ADGBQ8N7X0 1667 aa24.34■■□□□ 1.49
PKD1-225ENST00000562297 ZNF777Q9ULD5 760 aaPredicted RBP24.31■■□□□ 1.48
PKD1-225ENST00000562297 MYO5CQ9NQX4 1742 aa24.3■■□□□ 1.48
PKD1-225ENST00000562297 SAMD9LQ8IVG5 1584 aa24.29■■□□□ 1.48
PKD1-225ENST00000562297 ADGRL2O95490 1459 aa24.28■■□□□ 1.48
PKD1-225ENST00000562297 ARHGEF5Q12774 1597 aa24.27■■□□□ 1.48
PKD1-225ENST00000562297 NCOA1Q15788 1441 aa24.25■■□□□ 1.47
PKD1-225ENST00000562297 SHANK2Q9UPX8 1470 aa24.25■■□□□ 1.47
PKD1-225ENST00000562297 MBD5Q9P267 1494 aa24.24■■□□□ 1.47
PKD1-225ENST00000562297 DENND4BO75064 1496 aaPredicted RBP24.21■■□□□ 1.47
PKD1-225ENST00000562297 ARHGAP5Q13017 1502 aa24.2■■□□□ 1.47
PKD1-225ENST00000562297 KCNH8Q96L42 1107 aa24.19■■□□□ 1.46
PKD1-225ENST00000562297 WDR7Q9Y4E6 1490 aa24.18■■□□□ 1.46
PKD1-225ENST00000562297 SIN3AQ96ST3 1273 aa24.18■■□□□ 1.46
PKD1-225ENST00000562297 C9orf84Q5VXU9 1444 aa24.17■■□□□ 1.46
PKD1-225ENST00000562297 PLCH2O75038 1416 aa24.16■■□□□ 1.46
PKD1-225ENST00000562297 CCDC141Q6ZP82 1450 aa24.15■■□□□ 1.46
PKD1-225ENST00000562297 ANKRD30AQ9BXX3 1397 aa24.15■■□□□ 1.46
PKD1-225ENST00000562297 HNRNPMP52272 730 aaKnown RBP eCLIP24.15■■□□□ 1.46
PKD1-225ENST00000562297 SYCP2Q9BX26 1530 aa24.15■■□□□ 1.46
PKD1-225ENST00000562297 ACIN1Q9UKV3 1341 aaKnown RBP24.14■■□□□ 1.45
PKD1-225ENST00000562297 KIAA1107Q9UPP5 1409 aa24.12■■□□□ 1.45
PKD1-225ENST00000562297 ARAP3Q8WWN8 1544 aa24.12■■□□□ 1.45
PKD1-225ENST00000562297 ZNF316A6NFI3 1004 aaPredicted RBP24.11■■□□□ 1.45
PKD1-225ENST00000562297 PLEKHH2Q8IVE3 1493 aa24.11■■□□□ 1.45
PKD1-225ENST00000562297 ABCA9Q8IUA7 1624 aa24.1■■□□□ 1.45
PKD1-225ENST00000562297 TRIM52Q96A61 297 aa24.1■■□□□ 1.45
PKD1-225ENST00000562297 MAST1Q9Y2H9 1570 aa24.1■■□□□ 1.45
PKD1-225ENST00000562297 RSPH4AQ5TD94 716 aa24.1■■□□□ 1.45
PKD1-225ENST00000562297 TIMELESSQ9UNS1 1208 aa24.09■■□□□ 1.45
PKD1-225ENST00000562297 ASXL2Q76L83 1435 aa24.09■■□□□ 1.45
PKD1-225ENST00000562297 ARHGEF12Q9NZN5 1544 aa24.08■■□□□ 1.45
PKD1-225ENST00000562297 TSPY4P0CV99 314 aa24.08■■□□□ 1.44
PKD1-225ENST00000562297 TSPY10P0CW01 314 aa24.08■■□□□ 1.44
PKD1-225ENST00000562297 NEUROD1Q13562 356 aa24.08■■□□□ 1.44
PKD1-225ENST00000562297 MPHOSPH9Q99550 1183 aa24.08■■□□□ 1.44
PKD1-225ENST00000562297 ANKRD50Q9ULJ7 1429 aa24.07■■□□□ 1.44
PKD1-225ENST00000562297 ABCC1P33527 1531 aa24.06■■□□□ 1.44
PKD1-225ENST00000562297 PZPP20742 1482 aa24.04■■□□□ 1.44
PKD1-225ENST00000562297 EFCAB2Q5VUJ9 269 aa24.03■■□□□ 1.44
PKD1-225ENST00000562297 KIF15Q9NS87 1388 aa24.03■■□□□ 1.44
PKD1-225ENST00000562297 PLXNC1O60486 1568 aa24.01■■□□□ 1.43
PKD1-225ENST00000562297 KDM5DQ9BY66 1539 aa23.96■■□□□ 1.43
PKD1-225ENST00000562297 NPM1P06748 294 aaKnown RBP eCLIP23.96■■□□□ 1.43
PKD1-225ENST00000562297 ANKRD30BQ9BXX2 1392 aa23.95■■□□□ 1.42
PKD1-225ENST00000562297 TRAPPC8Q9Y2L5 1435 aa23.95■■□□□ 1.42
PKD1-225ENST00000562297 RIMBP3CA6NJZ7 1639 aa23.95■■□□□ 1.42
PKD1-225ENST00000562297 RIMBP3BA6NNM3 1639 aa23.95■■□□□ 1.42
PKD1-225ENST00000562297 RIMBP3Q9UFD9 1639 aa23.95■■□□□ 1.42
PKD1-225ENST00000562297 PPP1R15AO75807 674 aaPredicted RBP23.94■■□□□ 1.42
PKD1-225ENST00000562297 DIEXFQ68CQ4 756 aaKnown RBP23.94■■□□□ 1.42
PKD1-225ENST00000562297 SLC4A1APQ9BWU0 796 aaKnown RBP23.94■■□□□ 1.42
PKD1-225ENST00000562297 TONSLQ96HA7 1378 aa23.94■■□□□ 1.42
PKD1-225ENST00000562297 FANCAO15360 1455 aa23.94■■□□□ 1.42
PKD1-225ENST00000562297 FOXD1Q16676 465 aa23.93■■□□□ 1.42
PKD1-225ENST00000562297 RPRD2Q5VT52 1461 aaKnown RBP23.88■■□□□ 1.41
PKD1-225ENST00000562297 UNC13BO14795 1591 aa23.87■■□□□ 1.41
PKD1-225ENST00000562297 DUOX2Q9NRD8 1548 aa23.87■■□□□ 1.41
PKD1-225ENST00000562297 NUP155O75694 1391 aa23.87■■□□□ 1.41
PKD1-225ENST00000562297 ZFYVE16Q7Z3T8 1539 aa23.86■■□□□ 1.41
PKD1-225ENST00000562297 RTEL1-TNFRSF6BF6WH68 1400 aa23.84■■□□□ 1.41
PKD1-225ENST00000562297 ADGRL1O94910 1474 aa23.84■■□□□ 1.41
PKD1-225ENST00000562297 INO80Q9ULG1 1556 aaPredicted RBP23.83■■□□□ 1.41
PKD1-225ENST00000562297 ERBINQ96RT1 1412 aa23.82■■□□□ 1.4
PKD1-225ENST00000562297 PKD2Q13563 968 aa23.81■■□□□ 1.4
PKD1-225ENST00000562297 AFAP1Q8N556 730 aa23.81■■□□□ 1.4
PKD1-225ENST00000562297 CYB5RLQ6IPT4 315 aa23.81■■□□□ 1.4
PKD1-225ENST00000562297 FAM135AQ9P2D6 1515 aa23.8■■□□□ 1.4
PKD1-225ENST00000562297 CD109Q6YHK3 1445 aa23.8■■□□□ 1.4
PKD1-225ENST00000562297 SCAPERQ9BY12 1400 aa23.8■■□□□ 1.4
PKD1-225ENST00000562297 CFAP74Q9C0B2 1584 aa23.79■■□□□ 1.4
PKD1-225ENST00000562297 SPAG9O60271 1321 aaKnown RBP23.79■■□□□ 1.4
PKD1-225ENST00000562297 MAGI2Q86UL8 1455 aa23.79■■□□□ 1.4
PKD1-225ENST00000562297 TEX14Q8IWB6 1497 aa23.79■■□□□ 1.4
PKD1-225ENST00000562297 ATP7AQ04656 1500 aa23.78■■□□□ 1.4
PKD1-225ENST00000562297 IQGAP3Q86VI3 1631 aa23.78■■□□□ 1.4
PKD1-225ENST00000562297 DNAJC5Q9H3Z4 198 aa23.76■■□□□ 1.39
PKD1-225ENST00000562297 L3MBTL2Q969R5 705 aa23.74■■□□□ 1.39
PKD1-225ENST00000562297 MAP3K4Q9Y6R4 1608 aa23.72■■□□□ 1.39
PKD1-225ENST00000562297 KIDINS220Q9ULH0 1771 aa23.72■■□□□ 1.39
PKD1-225ENST00000562297 ZNF518AQ6AHZ1 1483 aa23.7■■□□□ 1.38
PKD1-225ENST00000562297 DEPDC5O75140 1603 aa23.7■■□□□ 1.38
PKD1-225ENST00000562297 GLI2P10070 1586 aa23.7■■□□□ 1.38
PKD1-225ENST00000562297 KDM5CP41229 1560 aa23.69■■□□□ 1.38
PKD1-225ENST00000562297 NEO1Q92859 1461 aa23.67■■□□□ 1.38
PKD1-225ENST00000562297 POGZQ7Z3K3 1410 aa23.67■■□□□ 1.38
PKD1-225ENST00000562297 EIF2AK4Q9P2K8 1649 aaKnown RBP23.64■■□□□ 1.38
PKD1-225ENST00000562297 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms