RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 MIER1Q8N108 512 aa14.17□□□□□ -0.14
SMG1-205ENST00000561947 ZNF644Q9H582 1327 aaPredicted RBP14.16□□□□□ -0.14
SMG1-205ENST00000561947 CDC42BPAQ5VT25 1732 aa14.16□□□□□ -0.14
SMG1-205ENST00000561947 CROCC2H7BZ55 1655 aa14.15□□□□□ -0.14
SMG1-205ENST00000561947 ADGBQ8N7X0 1667 aa14.15□□□□□ -0.14
SMG1-205ENST00000561947 ABCC10Q5T3U5 1492 aa14.14□□□□□ -0.15
SMG1-205ENST00000561947 PLEKHD1A6NEE1 506 aa14.14□□□□□ -0.15
SMG1-205ENST00000561947 CFDP1Q9UEE9 299 aaPredicted RBP14.14□□□□□ -0.15
SMG1-205ENST00000561947 DENND4BO75064 1496 aaPredicted RBP14.13□□□□□ -0.15
SMG1-205ENST00000561947 PPP1R15AO75807 674 aaPredicted RBP14.13□□□□□ -0.15
SMG1-205ENST00000561947 ACIN1Q9UKV3 1341 aaKnown RBP14.13□□□□□ -0.15
SMG1-205ENST00000561947 TONSLQ96HA7 1378 aa14.13□□□□□ -0.15
SMG1-205ENST00000561947 TRIM52Q96A61 297 aa14.11□□□□□ -0.15
SMG1-205ENST00000561947 CENPBP07199 599 aaPredicted RBP14.1□□□□□ -0.15
SMG1-205ENST00000561947 CLASP1Q7Z460 1538 aa14.09□□□□□ -0.15
SMG1-205ENST00000561947 ADGRL2O95490 1459 aa14.09□□□□□ -0.15
SMG1-205ENST00000561947 ERCC6L2Q5T890 1561 aa14.09□□□□□ -0.15
SMG1-205ENST00000561947 MPHOSPH9Q99550 1183 aa14.08□□□□□ -0.16
SMG1-205ENST00000561947 ZNF777Q9ULD5 760 aaPredicted RBP14.08□□□□□ -0.16
SMG1-205ENST00000561947 KDM5BQ9UGL1 1544 aa14.07□□□□□ -0.16
SMG1-205ENST00000561947 NCOA1Q15788 1441 aa14.07□□□□□ -0.16
SMG1-205ENST00000561947 ABCC2Q92887 1545 aa14.06□□□□□ -0.16
SMG1-205ENST00000561947 SHANK2Q9UPX8 1470 aa14.05□□□□□ -0.16
SMG1-205ENST00000561947 PREX2Q70Z35 1606 aa14.05□□□□□ -0.16
SMG1-205ENST00000561947 CDC42BPBQ9Y5S2 1711 aa14.04□□□□□ -0.16
SMG1-205ENST00000561947 SCAF1Q9H7N4 1312 aaKnown RBP14.03□□□□□ -0.16
SMG1-205ENST00000561947 ANKRD30AQ9BXX3 1397 aa14.03□□□□□ -0.16
SMG1-205ENST00000561947 ARHGEF5Q12774 1597 aa14.03□□□□□ -0.16
SMG1-205ENST00000561947 SAMD9LQ8IVG5 1584 aa14.01□□□□□ -0.17
SMG1-205ENST00000561947 C9orf84Q5VXU9 1444 aa14.01□□□□□ -0.17
SMG1-205ENST00000561947 PZPP20742 1482 aa14□□□□□ -0.17
SMG1-205ENST00000561947 ANKRD30BQ9BXX2 1392 aa14□□□□□ -0.17
SMG1-205ENST00000561947 YTHDC1Q96MU7 727 aaKnown RBP14□□□□□ -0.17
SMG1-205ENST00000561947 TTC37Q6PGP7 1564 aa13.99□□□□□ -0.17
SMG1-205ENST00000561947 UHRF1BP1LA0JNW5 1464 aa13.98□□□□□ -0.17
SMG1-205ENST00000561947 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.98□□□□□ -0.17
SMG1-205ENST00000561947 FOXD1Q16676 465 aa13.98□□□□□ -0.17
SMG1-205ENST00000561947 RPRD2Q5VT52 1461 aaKnown RBP13.98□□□□□ -0.17
SMG1-205ENST00000561947 MBD5Q9P267 1494 aa13.98□□□□□ -0.17
SMG1-205ENST00000561947 MYO5CQ9NQX4 1742 aa13.98□□□□□ -0.17
SMG1-205ENST00000561947 ZCCHC11Q5TAX3 1644 aaKnown RBP13.98□□□□□ -0.17
SMG1-205ENST00000561947 ANKRD50Q9ULJ7 1429 aa13.98□□□□□ -0.17
SMG1-205ENST00000561947 SLC4A1APQ9BWU0 796 aaKnown RBP13.98□□□□□ -0.17
SMG1-205ENST00000561947 CCDC141Q6ZP82 1450 aa13.96□□□□□ -0.17
SMG1-205ENST00000561947 TSPY4P0CV99 314 aa13.95□□□□□ -0.18
SMG1-205ENST00000561947 TSPY10P0CW01 314 aa13.95□□□□□ -0.18
SMG1-205ENST00000561947 ARHGAP5Q13017 1502 aa13.95□□□□□ -0.18
SMG1-205ENST00000561947 HNRNPMP52272 730 aaKnown RBP eCLIP13.94□□□□□ -0.18
SMG1-205ENST00000561947 TEX14Q8IWB6 1497 aa13.94□□□□□ -0.18
SMG1-205ENST00000561947 KIAA1107Q9UPP5 1409 aa13.93□□□□□ -0.18
SMG1-205ENST00000561947 HIRIP3Q9BW71 556 aaPredicted RBP13.93□□□□□ -0.18
SMG1-205ENST00000561947 KDM5DQ9BY66 1539 aa13.93□□□□□ -0.18
SMG1-205ENST00000561947 SYCP2Q9BX26 1530 aa13.93□□□□□ -0.18
SMG1-205ENST00000561947 DDX10Q13206 875 aaKnown RBP13.93□□□□□ -0.18
SMG1-205ENST00000561947 MAST1Q9Y2H9 1570 aa13.93□□□□□ -0.18
SMG1-205ENST00000561947 RSPH4AQ5TD94 716 aa13.92□□□□□ -0.18
SMG1-205ENST00000561947 L3MBTL2Q969R5 705 aa13.92□□□□□ -0.18
SMG1-205ENST00000561947 KIF15Q9NS87 1388 aa13.92□□□□□ -0.18
SMG1-205ENST00000561947 PLEKHH2Q8IVE3 1493 aa13.91□□□□□ -0.18
SMG1-205ENST00000561947 NUP155O75694 1391 aa13.88□□□□□ -0.19
SMG1-205ENST00000561947 PKD2Q13563 968 aa13.87□□□□□ -0.19
SMG1-205ENST00000561947 PLXNC1O60486 1568 aa13.87□□□□□ -0.19
SMG1-205ENST00000561947 PLCH2O75038 1416 aa13.87□□□□□ -0.19
SMG1-205ENST00000561947 KCNH8Q96L42 1107 aa13.87□□□□□ -0.19
SMG1-205ENST00000561947 GTF3C3Q9Y5Q9 886 aa13.87□□□□□ -0.19
SMG1-205ENST00000561947 HSPA5P11021 654 aaKnown RBP13.85□□□□□ -0.19
SMG1-205ENST00000561947 UNC13BO14795 1591 aa13.84□□□□□ -0.19
SMG1-205ENST00000561947 EIF4G2P78344 907 aaKnown RBP eCLIP13.84□□□□□ -0.19
SMG1-205ENST00000561947 ABCC1P33527 1531 aa13.84□□□□□ -0.19
SMG1-205ENST00000561947 ARHGEF12Q9NZN5 1544 aa13.84□□□□□ -0.19
SMG1-205ENST00000561947 NBPF8Q3BBV2 869 aa13.83□□□□□ -0.2
SMG1-205ENST00000561947 ARAP3Q8WWN8 1544 aa13.83□□□□□ -0.2
SMG1-205ENST00000561947 FAM135AQ9P2D6 1515 aa13.82□□□□□ -0.2
SMG1-205ENST00000561947 EFCAB2Q5VUJ9 269 aa13.81□□□□□ -0.2
SMG1-205ENST00000561947 WDR7Q9Y4E6 1490 aa13.81□□□□□ -0.2
SMG1-205ENST00000561947 DUOX2Q9NRD8 1548 aa13.8□□□□□ -0.2
SMG1-205ENST00000561947 ANP32CO43423 234 aa13.79□□□□□ -0.2
SMG1-205ENST00000561947 POLR1AO95602 1720 aaPredicted RBP13.79□□□□□ -0.2
SMG1-205ENST00000561947 WASHC2AQ641Q2 1341 aa13.78□□□□□ -0.2
SMG1-205ENST00000561947 IQGAP3Q86VI3 1631 aa13.78□□□□□ -0.2
SMG1-205ENST00000561947 CCER2I3L3R5 266 aa13.78□□□□□ -0.2
SMG1-205ENST00000561947 ABCA9Q8IUA7 1624 aa13.77□□□□□ -0.2
SMG1-205ENST00000561947 ERBINQ96RT1 1412 aa13.77□□□□□ -0.21
SMG1-205ENST00000561947 SPATA31E1Q6ZUB1 1445 aa13.77□□□□□ -0.21
SMG1-205ENST00000561947 TRAPPC8Q9Y2L5 1435 aa13.76□□□□□ -0.21
SMG1-205ENST00000561947 MAGI2Q86UL8 1455 aa13.76□□□□□ -0.21
SMG1-205ENST00000561947 UHRF1BP1Q6BDS2 1440 aa13.76□□□□□ -0.21
SMG1-205ENST00000561947 OSCARQ8IYS5 282 aa13.74□□□□□ -0.21
SMG1-205ENST00000561947 CCDC7Q96M83 1385 aa13.74□□□□□ -0.21
SMG1-205ENST00000561947 ZFYVE16Q7Z3T8 1539 aa13.73□□□□□ -0.21
SMG1-205ENST00000561947 RALGAPBQ86X10 1494 aa13.73□□□□□ -0.21
SMG1-205ENST00000561947 RTEL1-TNFRSF6BF6WH68 1400 aa13.73□□□□□ -0.21
SMG1-205ENST00000561947 CNTLNQ9NXG0 1405 aa13.73□□□□□ -0.21
SMG1-205ENST00000561947 ASXL2Q76L83 1435 aa13.72□□□□□ -0.21
SMG1-205ENST00000561947 FANCAO15360 1455 aa13.72□□□□□ -0.21
SMG1-205ENST00000561947 KDM5CP41229 1560 aa13.71□□□□□ -0.21
SMG1-205ENST00000561947 C11orf95C9JLR9 678 aaPredicted RBP13.71□□□□□ -0.22
SMG1-205ENST00000561947 SPAG9O60271 1321 aaKnown RBP13.7□□□□□ -0.22
SMG1-205ENST00000561947 ZNF326Q5BKZ1 582 aaKnown RBP13.7□□□□□ -0.22
SMG1-205ENST00000561947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.7□□□□□ -0.222e-12■□□□□ 10.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms