RNA–Protein interactions for RNA: ENST00000561225.1

MARK3-225, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-225ENST00000561225 KIF21BO75037 1637 aa13.75□□□□□ -0.21
MARK3-225ENST00000561225 CFAP43Q8NDM7 1665 aa13.74□□□□□ -0.21
MARK3-225ENST00000561225 KCNH8Q96L42 1107 aa13.73□□□□□ -0.21
MARK3-225ENST00000561225 PTPRMP28827 1452 aa13.73□□□□□ -0.21
MARK3-225ENST00000561225 RAPGEF2Q9Y4G8 1499 aa13.71□□□□□ -0.21
MARK3-225ENST00000561225 ARAP3Q8WWN8 1544 aa13.7□□□□□ -0.22
MARK3-225ENST00000561225 ADAMTSL3P82987 1691 aa13.69□□□□□ -0.22
MARK3-225ENST00000561225 ABCA8O94911 1581 aa13.67□□□□□ -0.22
MARK3-225ENST00000561225 PCF11O94913 1555 aaKnown RBP13.66□□□□□ -0.22
MARK3-225ENST00000561225 SPDYE2BA6NHP3 402 aa13.66□□□□□ -0.22
MARK3-225ENST00000561225 SPDYE6P0CI01 402 aa13.66□□□□□ -0.22
MARK3-225ENST00000561225 SPDYE2Q495Y8 402 aa13.66□□□□□ -0.22
MARK3-225ENST00000561225 LMTK3Q96Q04 1460 aa13.66□□□□□ -0.22
MARK3-225ENST00000561225 PRKAR2AP13861 404 aaKnown RBP13.65□□□□□ -0.22
MARK3-225ENST00000561225 GOLGA3Q08378 1498 aa13.62□□□□□ -0.23
MARK3-225ENST00000561225 RAPGEF3O95398 923 aa13.62□□□□□ -0.23
MARK3-225ENST00000561225 PHLDB1Q86UU1 1377 aa13.61□□□□□ -0.23
MARK3-225ENST00000561225 MADDQ8WXG6 1647 aa13.61□□□□□ -0.23
MARK3-225ENST00000561225 BCORL1Q5H9F3 1711 aa13.6□□□□□ -0.23
MARK3-225ENST00000561225 CLEC11AQ9Y240 323 aa13.6□□□□□ -0.23
MARK3-225ENST00000561225 C19orf67A6NJJ6 358 aa13.58□□□□□ -0.24
MARK3-225ENST00000561225 ARID4BQ4LE39 1312 aaPredicted RBP13.58□□□□□ -0.24
MARK3-225ENST00000561225 ABCA9Q8IUA7 1624 aa13.57□□□□□ -0.24
MARK3-225ENST00000561225 CTTNBP2Q8WZ74 1663 aa13.57□□□□□ -0.24
MARK3-225ENST00000561225 ATP10BO94823 1461 aa13.57□□□□□ -0.24
MARK3-225ENST00000561225 ARID3CA6NKF2 412 aa13.57□□□□□ -0.24
MARK3-225ENST00000561225 SPDYE1Q8NFV5 336 aaPredicted RBP13.57□□□□□ -0.24
MARK3-225ENST00000561225 NEO1Q92859 1461 aa13.56□□□□□ -0.24
MARK3-225ENST00000561225 HSPA2P54652 639 aa13.56□□□□□ -0.24
MARK3-225ENST00000561225 FRMPD1Q5SYB0 1578 aa13.56□□□□□ -0.24
MARK3-225ENST00000561225 CERKQ8TCT0 537 aa13.55□□□□□ -0.24
MARK3-225ENST00000561225 GABBR2O75899 941 aa13.53□□□□□ -0.24
MARK3-225ENST00000561225 LHX8Q68G74 356 aa13.53□□□□□ -0.24
MARK3-225ENST00000561225 ILDR2Q71H61 639 aa13.53□□□□□ -0.24
MARK3-225ENST00000561225 RIMS1Q86UR5 1692 aaKnown RBP13.52□□□□□ -0.25
MARK3-225ENST00000561225 ARHGEF40Q8TER5 1519 aa13.51□□□□□ -0.25
MARK3-225ENST00000561225 SOCS7O14512 581 aa13.51□□□□□ -0.25
MARK3-225ENST00000561225 DISP3Q9P2K9 1392 aa13.49□□□□□ -0.25
MARK3-225ENST00000561225 P3H3Q8IVL6 736 aa13.48□□□□□ -0.25
MARK3-225ENST00000561225 PRXQ9BXM0 1461 aa13.48□□□□□ -0.25
MARK3-225ENST00000561225 FAM9AQ8IZU1 332 aaPredicted RBP13.47□□□□□ -0.25
MARK3-225ENST00000561225 DENND4BO75064 1496 aaPredicted RBP13.46□□□□□ -0.25
MARK3-225ENST00000561225 FHOD3Q2V2M9 1422 aa13.46□□□□□ -0.26
MARK3-225ENST00000561225 POGZQ7Z3K3 1410 aa13.45□□□□□ -0.26
MARK3-225ENST00000561225 FANCAO15360 1455 aa13.44□□□□□ -0.26
MARK3-225ENST00000561225 AKNAQ7Z591 1439 aa13.44□□□□□ -0.26
MARK3-225ENST00000561225 RICTORQ6R327 1708 aa13.44□□□□□ -0.26
MARK3-225ENST00000561225 SIGLEC1Q9BZZ2 1709 aa13.43□□□□□ -0.26
MARK3-225ENST00000561225 RAPGEF6Q8TEU7 1601 aa13.42□□□□□ -0.26
MARK3-225ENST00000561225 YEATS2Q9ULM3 1422 aa13.42□□□□□ -0.26
MARK3-225ENST00000561225 ZNF692Q9BU19 519 aaPredicted RBP13.42□□□□□ -0.26
MARK3-225ENST00000561225 ZMYM4Q5VZL5 1548 aa13.41□□□□□ -0.26
MARK3-225ENST00000561225 NUP153P49790 1475 aaKnown RBP13.41□□□□□ -0.26
MARK3-225ENST00000561225 ZFYVE16Q7Z3T8 1539 aa13.4□□□□□ -0.26
MARK3-225ENST00000561225 MLECQ14165 292 aa13.4□□□□□ -0.26
MARK3-225ENST00000561225 SAMD9Q5K651 1589 aa13.4□□□□□ -0.26
MARK3-225ENST00000561225 TTC37Q6PGP7 1564 aa13.4□□□□□ -0.26
MARK3-225ENST00000561225 SSUH2Q9Y2M2 353 aa13.39□□□□□ -0.27
MARK3-225ENST00000561225 EFCAB5A4FU69 1503 aa13.39□□□□□ -0.27
MARK3-225ENST00000561225 MAGI2Q86UL8 1455 aa13.38□□□□□ -0.27
MARK3-225ENST00000561225 CHADLQ6NUI6 762 aa13.38□□□□□ -0.27
MARK3-225ENST00000561225 FER1L4A9Z1Z3 1794 aa13.37□□□□□ -0.27
MARK3-225ENST00000561225 SPATA31D1Q6ZQQ2 1576 aa13.37□□□□□ -0.27
MARK3-225ENST00000561225 CFAP74Q9C0B2 1584 aa13.37□□□□□ -0.27
MARK3-225ENST00000561225 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.36□□□□□ -0.27
MARK3-225ENST00000561225 PLEKHD1A6NEE1 506 aa13.36□□□□□ -0.27
MARK3-225ENST00000561225 ARHGEF12Q9NZN5 1544 aa13.35□□□□□ -0.27
MARK3-225ENST00000561225 HECW1Q76N89 1606 aa13.35□□□□□ -0.27
MARK3-225ENST00000561225 PREX1Q8TCU6 1659 aa13.34□□□□□ -0.27
MARK3-225ENST00000561225 MKRN4PQ13434 485 aaPredicted RBP13.34□□□□□ -0.27
MARK3-225ENST00000561225 CEBPAP49715 358 aaPredicted RBP13.33□□□□□ -0.28
MARK3-225ENST00000561225 STRCQ7RTU9 1775 aa13.32□□□□□ -0.28
MARK3-225ENST00000561225 SCAPERQ9BY12 1400 aa13.3□□□□□ -0.28
MARK3-225ENST00000561225 ATP10AO60312 1499 aa13.3□□□□□ -0.28
MARK3-225ENST00000561225 C9orf84Q5VXU9 1444 aa13.3□□□□□ -0.28
MARK3-225ENST00000561225 UHRF1BP1Q6BDS2 1440 aa13.3□□□□□ -0.28
MARK3-225ENST00000561225 PRR29P0C7W0 189 aa13.29□□□□□ -0.28
MARK3-225ENST00000561225 PTPRTO14522 1441 aa13.28□□□□□ -0.28
MARK3-225ENST00000561225 PLCH2O75038 1416 aa13.27□□□□□ -0.29
MARK3-225ENST00000561225 RANGAP1P46060 587 aaPredicted RBP13.26□□□□□ -0.29
MARK3-225ENST00000561225 LTBP4Q8N2S1 1624 aa13.25□□□□□ -0.29
MARK3-225ENST00000561225 IQSEC2Q5JU85 1478 aa13.23□□□□□ -0.29
MARK3-225ENST00000561225 CDK13Q14004 1512 aaKnown RBP13.23□□□□□ -0.29
MARK3-225ENST00000561225 POTEIP0CG38 1075 aa13.21□□□□□ -0.29
MARK3-225ENST00000561225 EFCAB2Q5VUJ9 269 aa13.21□□□□□ -0.29
MARK3-225ENST00000561225 SETD1BQ9UPS6 1966 aaKnown RBP13.21□□□□□ -0.29
MARK3-225ENST00000561225 ZNF518AQ6AHZ1 1483 aa13.21□□□□□ -0.3
MARK3-225ENST00000561225 CD44P16070 742 aaKnown RBP13.19□□□□□ -0.3
MARK3-225ENST00000561225 AFAP1Q8N556 730 aa13.19□□□□□ -0.3
MARK3-225ENST00000561225 NCOA1Q15788 1441 aa13.19□□□□□ -0.3
MARK3-225ENST00000561225 KDM5CP41229 1560 aa13.19□□□□□ -0.3
MARK3-225ENST00000561225 C3P01024 1663 aa13.18□□□□□ -0.3
MARK3-225ENST00000561225 REREQ9P2R6 1566 aa13.17□□□□□ -0.3
MARK3-225ENST00000561225 DIP2CQ9Y2E4 1556 aa13.17□□□□□ -0.3
MARK3-225ENST00000561225 TRAPPC8Q9Y2L5 1435 aa13.17□□□□□ -0.3
MARK3-225ENST00000561225 PLSCR2Q9NRY7 297 aa13.17□□□□□ -0.3
MARK3-225ENST00000561225 MYO5CQ9NQX4 1742 aa13.15□□□□□ -0.3
MARK3-225ENST00000561225 CLCN6P51797 869 aa13.14□□□□□ -0.31
MARK3-225ENST00000561225 AGLP35573 1532 aa13.13□□□□□ -0.31
MARK3-225ENST00000561225 MLH3Q9UHC1 1453 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms