RNA–Protein interactions for RNA: ENST00000561024.1

PDE8A-214, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-214ENST00000561024 KANK4Q5T7N3 995 aaPredicted RBP6.66□□□□□ -1.34
PDE8A-214ENST00000561024 DDX10Q13206 875 aaKnown RBP6.66□□□□□ -1.34
PDE8A-214ENST00000561024 PDE4CQ08493 712 aa6.65□□□□□ -1.34
PDE8A-214ENST00000561024 ITGAEP38570 1179 aa6.65□□□□□ -1.34
PDE8A-214ENST00000561024 ERCC6L2Q5T890 1561 aa6.65□□□□□ -1.35
PDE8A-214ENST00000561024 CCNB3Q8WWL7 1395 aa6.65□□□□□ -1.35
PDE8A-214ENST00000561024 PRG4Q92954 1404 aaPredicted RBP6.64□□□□□ -1.35
PDE8A-214ENST00000561024 KIAA0556O60303 1618 aa6.64□□□□□ -1.35
PDE8A-214ENST00000561024 CCER2I3L3R5 266 aa6.64□□□□□ -1.35
PDE8A-214ENST00000561024 KDM2AQ9Y2K7 1162 aa6.64□□□□□ -1.35
PDE8A-214ENST00000561024 SAMD1Q6SPF0 538 aaPredicted RBP6.63□□□□□ -1.35
PDE8A-214ENST00000561024 FANCIQ9NVI1 1328 aa6.63□□□□□ -1.35
PDE8A-214ENST00000561024 CARMIL2Q6F5E8 1435 aa6.63□□□□□ -1.35
PDE8A-214ENST00000561024 TRIM52Q96A61 297 aa6.63□□□□□ -1.35
PDE8A-214ENST00000561024 RAB3GAP2Q9H2M9 1393 aa6.63□□□□□ -1.35
PDE8A-214ENST00000561024 ANP32CO43423 234 aa6.63□□□□□ -1.35
PDE8A-214ENST00000561024 PPP1R15AO75807 674 aaPredicted RBP6.63□□□□□ -1.35
PDE8A-214ENST00000561024 LHX8Q68G74 356 aa6.63□□□□□ -1.35
PDE8A-214ENST00000561024 SAMD9Q5K651 1589 aa6.62□□□□□ -1.35
PDE8A-214ENST00000561024 CDK11BP21127 795 aaKnown RBP6.62□□□□□ -1.35
PDE8A-214ENST00000561024 CDK11AQ9UQ88 783 aaPredicted RBP6.62□□□□□ -1.35
PDE8A-214ENST00000561024 MAPKBP1O60336 1514 aa6.62□□□□□ -1.35
PDE8A-214ENST00000561024 DISP1Q96F81 1524 aa6.62□□□□□ -1.35
PDE8A-214ENST00000561024 MYT1LQ9UL68 1186 aa6.62□□□□□ -1.35
PDE8A-214ENST00000561024 EFCAB5A4FU69 1503 aa6.61□□□□□ -1.35
PDE8A-214ENST00000561024 JPH4Q96JJ6 628 aa6.61□□□□□ -1.35
PDE8A-214ENST00000561024 UHRF1BP1LA0JNW5 1464 aa6.61□□□□□ -1.35
PDE8A-214ENST00000561024 ZBTB22O15209 634 aa6.61□□□□□ -1.35
PDE8A-214ENST00000561024 CNKSR2Q8WXI2 1034 aa6.61□□□□□ -1.35
PDE8A-214ENST00000561024 DHX37Q8IY37 1157 aaKnown RBP6.6□□□□□ -1.35
PDE8A-214ENST00000561024 ADCY10Q96PN6 1610 aa6.6□□□□□ -1.35
PDE8A-214ENST00000561024 BRD2P25440 801 aaKnown RBP6.6□□□□□ -1.35
PDE8A-214ENST00000561024 SETD5Q9C0A6 1442 aa6.59□□□□□ -1.35
PDE8A-214ENST00000561024 ABCC2Q92887 1545 aa6.58□□□□□ -1.36
PDE8A-214ENST00000561024 TAF7LQ5H9L4 462 aa6.58□□□□□ -1.36
PDE8A-214ENST00000561024 SIN3AQ96ST3 1273 aa6.58□□□□□ -1.36
PDE8A-214ENST00000561024 ABCA8O94911 1581 aa6.57□□□□□ -1.36
PDE8A-214ENST00000561024 PTPRGP23470 1445 aa6.56□□□□□ -1.36
PDE8A-214ENST00000561024 ERICH6BQ5W0A0 696 aa6.56□□□□□ -1.36
PDE8A-214ENST00000561024 CYB5RLQ6IPT4 315 aa6.56□□□□□ -1.36
PDE8A-214ENST00000561024 HIRIP3Q9BW71 556 aaPredicted RBP6.56□□□□□ -1.36
PDE8A-214ENST00000561024 PKNOX2Q96KN3 472 aa6.55□□□□□ -1.36
PDE8A-214ENST00000561024 KDM5BQ9UGL1 1544 aa6.55□□□□□ -1.36
PDE8A-214ENST00000561024 UACAQ9BZF9 1416 aa6.55□□□□□ -1.36
PDE8A-214ENST00000561024 ARHGAP35Q9NRY4 1499 aa6.55□□□□□ -1.36
PDE8A-214ENST00000561024 HNRNPUQ00839 825 aaKnown RBP eCLIP6.54□□□□□ -1.36
PDE8A-214ENST00000561024 DEKP35659 375 aaKnown RBP6.54□□□□□ -1.36
PDE8A-214ENST00000561024 DIP2BQ9P265 1576 aa6.53□□□□□ -1.36
PDE8A-214ENST00000561024 IGSF3O75054 1194 aa6.53□□□□□ -1.36
PDE8A-214ENST00000561024 IRX6P78412 446 aaPredicted RBP6.53□□□□□ -1.36
PDE8A-214ENST00000561024 KIF13AQ9H1H9 1805 aa6.53□□□□□ -1.36
PDE8A-214ENST00000561024 ZCCHC11Q5TAX3 1644 aaKnown RBP6.53□□□□□ -1.36
PDE8A-214ENST00000561024 RAPGEF6Q8TEU7 1601 aa6.53□□□□□ -1.36
PDE8A-214ENST00000561024 PPP4R2Q9NY27 417 aa6.53□□□□□ -1.36
PDE8A-214ENST00000561024 GLI2P10070 1586 aa6.53□□□□□ -1.36
PDE8A-214ENST00000561024 MAP3K1Q13233 1512 aa6.53□□□□□ -1.36
PDE8A-214ENST00000561024 FAM50AQ14320 339 aaKnown RBP6.52□□□□□ -1.37
PDE8A-214ENST00000561024 PLB1Q6P1J6 1458 aa6.52□□□□□ -1.37
PDE8A-214ENST00000561024 TIAM1Q13009 1591 aa6.52□□□□□ -1.37
PDE8A-214ENST00000561024 ABCC10Q5T3U5 1492 aa6.52□□□□□ -1.37
PDE8A-214ENST00000561024 TONSLQ96HA7 1378 aa6.51□□□□□ -1.37
PDE8A-214ENST00000561024 HSP90B1P14625 803 aaKnown RBP6.5□□□□□ -1.37
PDE8A-214ENST00000561024 PHLDB1Q86UU1 1377 aa6.5□□□□□ -1.37
PDE8A-214ENST00000561024 LRRC9Q6ZRR7 1453 aa6.5□□□□□ -1.37
PDE8A-214ENST00000561024 HECW1Q76N89 1606 aa6.5□□□□□ -1.37
PDE8A-214ENST00000561024 FMN1Q68DA7 1419 aa6.49□□□□□ -1.37
PDE8A-214ENST00000561024 HMGB1P09429 215 aaKnown RBP6.49□□□□□ -1.37
PDE8A-214ENST00000561024 NOP58Q9Y2X3 529 aaKnown RBP6.49□□□□□ -1.37
PDE8A-214ENST00000561024 WDR7Q9Y4E6 1490 aa6.48□□□□□ -1.37
PDE8A-214ENST00000561024 MAP3K4Q9Y6R4 1608 aa6.48□□□□□ -1.37
PDE8A-214ENST00000561024 NPM1P06748 294 aaKnown RBP eCLIP6.48□□□□□ -1.37
PDE8A-214ENST00000561024 BCL11BQ9C0K0 894 aaPredicted RBP6.48□□□□□ -1.37
PDE8A-214ENST00000561024 CFAP43Q8NDM7 1665 aa6.48□□□□□ -1.37
PDE8A-214ENST00000561024 ASXL2Q76L83 1435 aa6.48□□□□□ -1.37
PDE8A-214ENST00000561024 NUP153P49790 1475 aaKnown RBP6.47□□□□□ -1.37
PDE8A-214ENST00000561024 FHOD3Q2V2M9 1422 aa6.47□□□□□ -1.37
PDE8A-214ENST00000561024 EPRSP07814 1512 aaKnown RBP6.46□□□□□ -1.37
PDE8A-214ENST00000561024 NBR1Q14596 966 aa6.46□□□□□ -1.37
PDE8A-214ENST00000561024 B4GALNT3Q6L9W6 998 aa6.46□□□□□ -1.37
PDE8A-214ENST00000561024 CHRDL2Q6WN34 429 aa6.46□□□□□ -1.37
PDE8A-214ENST00000561024 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.46□□□□□ -1.38
PDE8A-214ENST00000561024 ABCA9Q8IUA7 1624 aa6.46□□□□□ -1.38
PDE8A-214ENST00000561024 PPRC1Q5VV67 1664 aaKnown RBP6.46□□□□□ -1.38
PDE8A-214ENST00000561024 FYCO1Q9BQS8 1478 aa6.45□□□□□ -1.38
PDE8A-214ENST00000561024 FGD1P98174 961 aa6.45□□□□□ -1.38
PDE8A-214ENST00000561024 CCDC18Q5T9S5 1454 aa6.45□□□□□ -1.38
PDE8A-214ENST00000561024 CCDC9Q9Y3X0 531 aaKnown RBP6.45□□□□□ -1.38
PDE8A-214ENST00000561024 ATP10BO94823 1461 aa6.44□□□□□ -1.38
PDE8A-214ENST00000561024 PCF11O94913 1555 aaKnown RBP6.44□□□□□ -1.38
PDE8A-214ENST00000561024 PAK3O75914 559 aaPredicted RBP6.44□□□□□ -1.38
PDE8A-214ENST00000561024 RTL5Q5HYW3 569 aaPredicted RBP6.44□□□□□ -1.38
PDE8A-214ENST00000561024 TEX14Q8IWB6 1497 aa6.44□□□□□ -1.38
PDE8A-214ENST00000561024 MAGI3Q5TCQ9 1506 aa6.44□□□□□ -1.38
PDE8A-214ENST00000561024 CASKIN1Q8WXD9 1431 aa6.44□□□□□ -1.38
PDE8A-214ENST00000561024 WASHC2AQ641Q2 1341 aa6.44□□□□□ -1.38
PDE8A-214ENST00000561024 ZBED9Q6R2W3 1325 aa6.44□□□□□ -1.38
PDE8A-214ENST00000561024 ANP32AP39687 249 aaKnown RBP6.44□□□□□ -1.38
PDE8A-214ENST00000561024 ATP1B4Q9UN42 357 aaPredicted RBP6.44□□□□□ -1.38
PDE8A-214ENST00000561024 CFAP74Q9C0B2 1584 aa6.43□□□□□ -1.38
PDE8A-214ENST00000561024 ARAP3Q8WWN8 1544 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms