RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 FOXD1Q16676 465 aa20.69■□□□□ 0.9
CRTC3-210ENST00000560927 CDK11AQ9UQ88 783 aaPredicted RBP20.69■□□□□ 0.9
CRTC3-210ENST00000560927 DNMT1P26358 1616 aaKnown RBP20.68■□□□□ 0.9
CRTC3-210ENST00000560927 ROCK1Q13464 1354 aa20.67■□□□□ 0.9
CRTC3-210ENST00000560927 TROQ12816 1431 aaPredicted RBP20.65■□□□□ 0.9
CRTC3-210ENST00000560927 SUPT16HQ9Y5B9 1047 aaKnown RBP20.65■□□□□ 0.9
CRTC3-210ENST00000560927 ANP32CO43423 234 aa20.63■□□□□ 0.89
CRTC3-210ENST00000560927 JPH4Q96JJ6 628 aa20.63■□□□□ 0.89
CRTC3-210ENST00000560927 NUP160Q12769 1436 aa20.63■□□□□ 0.89
CRTC3-210ENST00000560927 KIF14Q15058 1648 aa20.6■□□□□ 0.89
CRTC3-210ENST00000560927 CCER2I3L3R5 266 aa20.6■□□□□ 0.89
CRTC3-210ENST00000560927 L3MBTL2Q969R5 705 aa20.6■□□□□ 0.89
CRTC3-210ENST00000560927 CFDP1Q9UEE9 299 aaPredicted RBP20.6■□□□□ 0.89
CRTC3-210ENST00000560927 CAMSAP2Q08AD1 1489 aa20.6■□□□□ 0.89
CRTC3-210ENST00000560927 CARMIL2Q6F5E8 1435 aa20.59■□□□□ 0.89
CRTC3-210ENST00000560927 GPATCH8Q9UKJ3 1502 aaKnown RBP20.59■□□□□ 0.89
CRTC3-210ENST00000560927 HSPA5P11021 654 aaKnown RBP20.58■□□□□ 0.89
CRTC3-210ENST00000560927 ANKRD30BQ9BXX2 1392 aa20.57■□□□□ 0.88
CRTC3-210ENST00000560927 ZNF777Q9ULD5 760 aaPredicted RBP20.55■□□□□ 0.88
CRTC3-210ENST00000560927 ADCY10Q96PN6 1610 aa20.54■□□□□ 0.88
CRTC3-210ENST00000560927 ITSN2Q9NZM3 1697 aa20.54■□□□□ 0.88
CRTC3-210ENST00000560927 SLC4A1APQ9BWU0 796 aaKnown RBP20.54■□□□□ 0.88
CRTC3-210ENST00000560927 WASHC2AQ641Q2 1341 aa20.54■□□□□ 0.88
CRTC3-210ENST00000560927 RPRD2Q5VT52 1461 aaKnown RBP20.53■□□□□ 0.88
CRTC3-210ENST00000560927 NCOA1Q15788 1441 aa20.52■□□□□ 0.88
CRTC3-210ENST00000560927 EIF4G2P78344 907 aaKnown RBP eCLIP20.51■□□□□ 0.87
CRTC3-210ENST00000560927 ABCA8O94911 1581 aa20.5■□□□□ 0.87
CRTC3-210ENST00000560927 PZPP20742 1482 aa20.49■□□□□ 0.87
CRTC3-210ENST00000560927 TEX14Q8IWB6 1497 aa20.49■□□□□ 0.87
CRTC3-210ENST00000560927 NBPF8Q3BBV2 869 aa20.49■□□□□ 0.87
CRTC3-210ENST00000560927 ATP10BO94823 1461 aa20.47■□□□□ 0.87
CRTC3-210ENST00000560927 ADGBQ8N7X0 1667 aa20.47■□□□□ 0.87
CRTC3-210ENST00000560927 PLEKHD1A6NEE1 506 aa20.46■□□□□ 0.87
CRTC3-210ENST00000560927 CROCC2H7BZ55 1655 aa20.46■□□□□ 0.87
CRTC3-210ENST00000560927 ADGRL2O95490 1459 aa20.46■□□□□ 0.87
CRTC3-210ENST00000560927 C11orf95C9JLR9 678 aaPredicted RBP20.44■□□□□ 0.86
CRTC3-210ENST00000560927 ABCC10Q5T3U5 1492 aa20.44■□□□□ 0.86
CRTC3-210ENST00000560927 CDC42BPAQ5VT25 1732 aa20.43■□□□□ 0.86
CRTC3-210ENST00000560927 ANKRD30AQ9BXX3 1397 aa20.42■□□□□ 0.86
CRTC3-210ENST00000560927 ANKRD50Q9ULJ7 1429 aa20.38■□□□□ 0.85
CRTC3-210ENST00000560927 KIAA1107Q9UPP5 1409 aa20.38■□□□□ 0.85
CRTC3-210ENST00000560927 CCDC7Q96M83 1385 aa20.37■□□□□ 0.85
CRTC3-210ENST00000560927 CNTLNQ9NXG0 1405 aa20.37■□□□□ 0.85
CRTC3-210ENST00000560927 PKD2Q13563 968 aa20.37■□□□□ 0.85
CRTC3-210ENST00000560927 PTPRGP23470 1445 aa20.36■□□□□ 0.85
CRTC3-210ENST00000560927 C9orf84Q5VXU9 1444 aa20.36■□□□□ 0.85
CRTC3-210ENST00000560927 FKBP8Q14318 412 aa20.36■□□□□ 0.85
CRTC3-210ENST00000560927 SPATA31E1Q6ZUB1 1445 aa20.35■□□□□ 0.85
CRTC3-210ENST00000560927 BCANQ96GW7 911 aa20.35■□□□□ 0.85
CRTC3-210ENST00000560927 SHANK2Q9UPX8 1470 aa20.33■□□□□ 0.85
CRTC3-210ENST00000560927 MBD5Q9P267 1494 aa20.32■□□□□ 0.84
CRTC3-210ENST00000560927 HNRNPMP52272 730 aaKnown RBP eCLIP20.32■□□□□ 0.84
CRTC3-210ENST00000560927 NUP155O75694 1391 aa20.3■□□□□ 0.84
CRTC3-210ENST00000560927 KIF7Q2M1P5 1343 aa20.3■□□□□ 0.84
CRTC3-210ENST00000560927 CCDC184Q52MB2 194 aa20.3■□□□□ 0.84
CRTC3-210ENST00000560927 TSPY4P0CV99 314 aa20.29■□□□□ 0.84
CRTC3-210ENST00000560927 TSPY10P0CW01 314 aa20.29■□□□□ 0.84
CRTC3-210ENST00000560927 HNRNPUQ00839 825 aaKnown RBP eCLIP20.29■□□□□ 0.84
CRTC3-210ENST00000560927 CHD1O14646 1710 aa20.28■□□□□ 0.84
CRTC3-210ENST00000560927 ZNF326Q5BKZ1 582 aaKnown RBP20.28■□□□□ 0.84
CRTC3-210ENST00000560927 PRKRIP1Q9H875 184 aaPredicted RBP20.26■□□□□ 0.83
CRTC3-210ENST00000560927 KIF15Q9NS87 1388 aa20.26■□□□□ 0.83
CRTC3-210ENST00000560927 ARHGEF5Q12774 1597 aa20.24■□□□□ 0.83
CRTC3-210ENST00000560927 SAMD9LQ8IVG5 1584 aa20.24■□□□□ 0.83
CRTC3-210ENST00000560927 CDC42BPBQ9Y5S2 1711 aa20.24■□□□□ 0.83
CRTC3-210ENST00000560927 NEFLP07196 543 aa20.23■□□□□ 0.83
CRTC3-210ENST00000560927 POLR1AO95602 1720 aaPredicted RBP20.22■□□□□ 0.83
CRTC3-210ENST00000560927 KDM5DQ9BY66 1539 aa20.22■□□□□ 0.83
CRTC3-210ENST00000560927 TSHZ2Q9NRE2 1034 aa20.22■□□□□ 0.83
CRTC3-210ENST00000560927 PREX2Q70Z35 1606 aa20.21■□□□□ 0.83
CRTC3-210ENST00000560927 USP47Q96K76 1375 aa20.21■□□□□ 0.83
CRTC3-210ENST00000560927 CCDC141Q6ZP82 1450 aa20.2■□□□□ 0.82
CRTC3-210ENST00000560927 SHROOM2Q13796 1616 aa20.19■□□□□ 0.82
CRTC3-210ENST00000560927 ERCC6L2Q5T890 1561 aa20.19■□□□□ 0.82
CRTC3-210ENST00000560927 BCORL1Q5H9F3 1711 aa20.18■□□□□ 0.82
CRTC3-210ENST00000560927 TTC37Q6PGP7 1564 aa20.17■□□□□ 0.82
CRTC3-210ENST00000560927 KDM5CP41229 1560 aa20.16■□□□□ 0.82
CRTC3-210ENST00000560927 UHRF1BP1Q6BDS2 1440 aa20.16■□□□□ 0.82
CRTC3-210ENST00000560927 MRS2Q9HD23 443 aa20.16■□□□□ 0.82
CRTC3-210ENST00000560927 FAM9BQ8IZU0 186 aa20.15■□□□□ 0.82
CRTC3-210ENST00000560927 SYCP2Q9BX26 1530 aa20.15■□□□□ 0.82
CRTC3-210ENST00000560927 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.15■□□□□ 0.82
CRTC3-210ENST00000560927 POLR3GLQ9BT43 218 aa20.13■□□□□ 0.81
CRTC3-210ENST00000560927 RALGAPBQ86X10 1494 aa20.13■□□□□ 0.81
CRTC3-210ENST00000560927 ARHGAP5Q13017 1502 aa20.13■□□□□ 0.81
CRTC3-210ENST00000560927 KDM2AQ9Y2K7 1162 aa20.13■□□□□ 0.81
CRTC3-210ENST00000560927 ARHGEF12Q9NZN5 1544 aa20.13■□□□□ 0.81
CRTC3-210ENST00000560927 FAM135AQ9P2D6 1515 aa20.12■□□□□ 0.81
CRTC3-210ENST00000560927 RSPH4AQ5TD94 716 aa20.12■□□□□ 0.81
CRTC3-210ENST00000560927 DHX29Q7Z478 1369 aaKnown RBP20.12■□□□□ 0.81
CRTC3-210ENST00000560927 ABCC2Q92887 1545 aa20.11■□□□□ 0.81
CRTC3-210ENST00000560927 DCAF11Q8TEB1 546 aa20.1■□□□□ 0.81
CRTC3-210ENST00000560927 CARD11Q9BXL7 1154 aa20.1■□□□□ 0.81
CRTC3-210ENST00000560927 CNGB1Q14028 1251 aaPredicted RBP20.09■□□□□ 0.81
CRTC3-210ENST00000560927 IRX6P78412 446 aaPredicted RBP20.06■□□□□ 0.8
CRTC3-210ENST00000560927 MAST1Q9Y2H9 1570 aa20.06■□□□□ 0.8
CRTC3-210ENST00000560927 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.04■□□□□ 0.8
CRTC3-210ENST00000560927 MYO5CQ9NQX4 1742 aa20.04■□□□□ 0.8
CRTC3-210ENST00000560927 ARID4BQ4LE39 1312 aaPredicted RBP20.04■□□□□ 0.8
CRTC3-210ENST00000560927 ST20-MTHFSA0A0A6YYL1 179 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms