RNA–Protein interactions for RNA: ENST00000560920.6

TRIP4-211, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-211ENST00000560920 MLECQ14165 292 aa31.1■■■□□ 2.57
TRIP4-211ENST00000560920 ATP1B4Q9UN42 357 aaPredicted RBP31.05■■■□□ 2.56
TRIP4-211ENST00000560920 EHMT2Q96KQ7 1210 aa31.04■■■□□ 2.56
TRIP4-211ENST00000560920 UBTFP17480 764 aaKnown RBP31.03■■■□□ 2.56
TRIP4-211ENST00000560920 EFCAB2Q5VUJ9 269 aa31.03■■■□□ 2.56
TRIP4-211ENST00000560920 ATP10AO60312 1499 aa31.01■■■□□ 2.56
TRIP4-211ENST00000560920 FMN1Q68DA7 1419 aa31■■■□□ 2.55
TRIP4-211ENST00000560920 FER1L4A9Z1Z3 1794 aa31■■■□□ 2.55
TRIP4-211ENST00000560920 ARHGAP35Q9NRY4 1499 aa30.99■■■□□ 2.55
TRIP4-211ENST00000560920 CDK11AQ9UQ88 783 aaPredicted RBP30.97■■■□□ 2.55
TRIP4-211ENST00000560920 ARHGEF12Q9NZN5 1544 aa30.96■■■□□ 2.55
TRIP4-211ENST00000560920 MYO5CQ9NQX4 1742 aa30.95■■■□□ 2.55
TRIP4-211ENST00000560920 C9orf84Q5VXU9 1444 aa30.95■■■□□ 2.54
TRIP4-211ENST00000560920 KIF14Q15058 1648 aa30.94■■■□□ 2.54
TRIP4-211ENST00000560920 AFAP1Q8N556 730 aa30.91■■■□□ 2.54
TRIP4-211ENST00000560920 CEBPAP49715 358 aaPredicted RBP30.9■■■□□ 2.54
TRIP4-211ENST00000560920 TROQ12816 1431 aaPredicted RBP30.9■■■□□ 2.54
TRIP4-211ENST00000560920 CERKQ8TCT0 537 aa30.89■■■□□ 2.54
TRIP4-211ENST00000560920 ZNF518AQ6AHZ1 1483 aa30.87■■■□□ 2.53
TRIP4-211ENST00000560920 ARHGAP5Q13017 1502 aa30.85■■■□□ 2.53
TRIP4-211ENST00000560920 KDM5CP41229 1560 aa30.83■■■□□ 2.53
TRIP4-211ENST00000560920 CLIP1P30622 1438 aa30.81■■■□□ 2.52
TRIP4-211ENST00000560920 LRRIQ1Q96JM4 1722 aa30.81■■■□□ 2.52
TRIP4-211ENST00000560920 PREX1Q8TCU6 1659 aa30.81■■■□□ 2.52
TRIP4-211ENST00000560920 MYT1LQ9UL68 1186 aa30.78■■■□□ 2.52
TRIP4-211ENST00000560920 CHIC1Q5VXU3 224 aa30.77■■■□□ 2.52
TRIP4-211ENST00000560920 DIP2CQ9Y2E4 1556 aa30.76■■■□□ 2.52
TRIP4-211ENST00000560920 CDC42BPBQ9Y5S2 1711 aa30.76■■■□□ 2.51
TRIP4-211ENST00000560920 MLH3Q9UHC1 1453 aa30.73■■■□□ 2.51
TRIP4-211ENST00000560920 REREQ9P2R6 1566 aa30.72■■■□□ 2.51
TRIP4-211ENST00000560920 STRCQ7RTU9 1775 aa30.71■■■□□ 2.51
TRIP4-211ENST00000560920 TRAPPC8Q9Y2L5 1435 aa30.71■■■□□ 2.51
TRIP4-211ENST00000560920 SETD1BQ9UPS6 1966 aaKnown RBP30.7■■■□□ 2.51
TRIP4-211ENST00000560920 ABCA6Q8N139 1617 aa30.69■■■□□ 2.5
TRIP4-211ENST00000560920 DMRT2Q9Y5R5 561 aa30.69■■■□□ 2.5
TRIP4-211ENST00000560920 UHRF1BP1Q6BDS2 1440 aa30.69■■■□□ 2.5
TRIP4-211ENST00000560920 PREX2Q70Z35 1606 aa30.66■■■□□ 2.5
TRIP4-211ENST00000560920 ABCC1P33527 1531 aa30.66■■■□□ 2.5
TRIP4-211ENST00000560920 CASKIN1Q8WXD9 1431 aa30.65■■■□□ 2.5
TRIP4-211ENST00000560920 AGLP35573 1532 aa30.64■■■□□ 2.5
TRIP4-211ENST00000560920 C3P01024 1663 aa30.62■■■□□ 2.49
TRIP4-211ENST00000560920 CCDC18Q5T9S5 1454 aa30.62■■■□□ 2.49
TRIP4-211ENST00000560920 ITSN2Q9NZM3 1697 aa30.6■■■□□ 2.49
TRIP4-211ENST00000560920 ESF1Q9H501 851 aaKnown RBP30.58■■■□□ 2.49
TRIP4-211ENST00000560920 KIDINS220Q9ULH0 1771 aa30.58■■■□□ 2.49
TRIP4-211ENST00000560920 CDC42BPAQ5VT25 1732 aa30.56■■■□□ 2.48
TRIP4-211ENST00000560920 PTPRTO14522 1441 aa30.55■■■□□ 2.48
TRIP4-211ENST00000560920 CNTLNQ9NXG0 1405 aa30.5■■■□□ 2.47
TRIP4-211ENST00000560920 ZNF777Q9ULD5 760 aaPredicted RBP30.5■■■□□ 2.47
TRIP4-211ENST00000560920 SAMD9LQ8IVG5 1584 aa30.49■■■□□ 2.47
TRIP4-211ENST00000560920 FYCO1Q9BQS8 1478 aa30.48■■■□□ 2.47
TRIP4-211ENST00000560920 GPATCH8Q9UKJ3 1502 aaKnown RBP30.47■■■□□ 2.47
TRIP4-211ENST00000560920 HNRNPMP52272 730 aaKnown RBP eCLIP30.46■■■□□ 2.47
TRIP4-211ENST00000560920 SPAG9O60271 1321 aaKnown RBP30.44■■■□□ 2.46
TRIP4-211ENST00000560920 NCOA1Q15788 1441 aa30.43■■■□□ 2.46
TRIP4-211ENST00000560920 SYCP2Q9BX26 1530 aa30.42■■■□□ 2.46
TRIP4-211ENST00000560920 LTBP4Q8N2S1 1624 aa30.42■■■□□ 2.46
TRIP4-211ENST00000560920 ZMYM3Q14202 1370 aa30.41■■■□□ 2.46
TRIP4-211ENST00000560920 NPATQ14207 1427 aa30.4■■■□□ 2.46
TRIP4-211ENST00000560920 DISP3Q9P2K9 1392 aa30.39■■■□□ 2.45
TRIP4-211ENST00000560920 ILDR2Q71H61 639 aa30.38■■■□□ 2.45
TRIP4-211ENST00000560920 MROH2AA6NES4 1674 aa30.38■■■□□ 2.45
TRIP4-211ENST00000560920 KIAA1107Q9UPP5 1409 aa30.36■■■□□ 2.45
TRIP4-211ENST00000560920 SUPT6HQ7KZ85 1726 aaKnown RBP30.36■■■□□ 2.45
TRIP4-211ENST00000560920 CFDP1Q9UEE9 299 aaPredicted RBP30.35■■■□□ 2.45
TRIP4-211ENST00000560920 CAMSAP1Q5T5Y3 1602 aa30.34■■■□□ 2.45
TRIP4-211ENST00000560920 ATP7AQ04656 1500 aa30.33■■■□□ 2.45
TRIP4-211ENST00000560920 A2MP01023 1474 aa30.31■■■□□ 2.44
TRIP4-211ENST00000560920 PLEKHH2Q8IVE3 1493 aa30.31■■■□□ 2.44
TRIP4-211ENST00000560920 NCKAP5LQ9HCH0 1330 aa30.3■■■□□ 2.44
TRIP4-211ENST00000560920 PLXNC1O60486 1568 aa30.3■■■□□ 2.44
TRIP4-211ENST00000560920 IQSEC2Q5JU85 1478 aa30.3■■■□□ 2.44
TRIP4-211ENST00000560920 CCNB3Q8WWL7 1395 aa30.29■■■□□ 2.44
TRIP4-211ENST00000560920 INO80Q9ULG1 1556 aaPredicted RBP30.29■■■□□ 2.44
TRIP4-211ENST00000560920 CLTCQ00610 1675 aaKnown RBP30.28■■■□□ 2.44
TRIP4-211ENST00000560920 GGT6Q6P531 493 aa30.26■■■□□ 2.43
TRIP4-211ENST00000560920 PTPRKQ15262 1439 aa30.25■■■□□ 2.43
TRIP4-211ENST00000560920 ZNF644Q9H582 1327 aaPredicted RBP30.23■■■□□ 2.43
TRIP4-211ENST00000560920 MTUS2Q5JR59 1369 aa30.23■■■□□ 2.43
TRIP4-211ENST00000560920 ZNF335Q9H4Z2 1342 aaPredicted RBP30.22■■■□□ 2.43
TRIP4-211ENST00000560920 SOCS7O14512 581 aa30.21■■■□□ 2.43
TRIP4-211ENST00000560920 MYO3AQ8NEV4 1616 aa30.2■■■□□ 2.43
TRIP4-211ENST00000560920 PKD2Q13563 968 aa30.19■■■□□ 2.42
TRIP4-211ENST00000560920 PPP6R1Q9UPN7 881 aa30.19■■■□□ 2.42
TRIP4-211ENST00000560920 ZNF142P52746 1687 aaPredicted RBP30.19■■■□□ 2.42
TRIP4-211ENST00000560920 PLA2R1Q13018 1463 aa30.19■■■□□ 2.42
TRIP4-211ENST00000560920 CEP170BQ9Y4F5 1589 aaPredicted RBP30.17■■■□□ 2.42
TRIP4-211ENST00000560920 MBD5Q9P267 1494 aa30.17■■■□□ 2.42
TRIP4-211ENST00000560920 TCOF1Q13428 1488 aaKnown RBP30.16■■■□□ 2.42
TRIP4-211ENST00000560920 SPATA31D1Q6ZQQ2 1576 aa30.15■■■□□ 2.42
TRIP4-211ENST00000560920 ADGBQ8N7X0 1667 aa30.15■■■□□ 2.42
TRIP4-211ENST00000560920 TIAM1Q13009 1591 aa30.15■■■□□ 2.42
TRIP4-211ENST00000560920 RTEL1-TNFRSF6BF6WH68 1400 aa30.11■■■□□ 2.41
TRIP4-211ENST00000560920 UBAP1LF5GYI3 381 aa30.1■■■□□ 2.41
TRIP4-211ENST00000560920 DHX29Q7Z478 1369 aaKnown RBP30.09■■■□□ 2.41
TRIP4-211ENST00000560920 EHBP1L1Q8N3D4 1523 aa30.06■■■□□ 2.4
TRIP4-211ENST00000560920 CEP162Q5TB80 1403 aa30.06■■■□□ 2.4
TRIP4-211ENST00000560920 A2ML1A8K2U0 1454 aa30.06■■■□□ 2.4
TRIP4-211ENST00000560920 DNMT1P26358 1616 aaKnown RBP30.04■■■□□ 2.4
TRIP4-211ENST00000560920 FBXO31Q5XUX0 539 aaPredicted RBP30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms