RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 BOLA1Q9Y3E2 137 aa9.86□□□□□ -0.83
ZEB1-220ENST00000560909 PYGBP11216 843 aa9.85□□□□□ -0.83
ZEB1-220ENST00000560909 PROM2Q8N271 834 aa9.85□□□□□ -0.83
ZEB1-220ENST00000560909 SMARCA2P51531 1590 aa9.84□□□□□ -0.83
ZEB1-220ENST00000560909 GPR153Q6NV75 609 aa9.84□□□□□ -0.83
ZEB1-220ENST00000560909 Q6ZNB5 142 aa9.84□□□□□ -0.83
ZEB1-220ENST00000560909 CC2D2AQ9P2K1 1620 aa9.82□□□□□ -0.84
ZEB1-220ENST00000560909 ILDR1Q86SU0 546 aaPredicted RBP9.81□□□□□ -0.84
ZEB1-220ENST00000560909 PLCD3Q8N3E9 789 aa9.81□□□□□ -0.84
ZEB1-220ENST00000560909 HMGXB3Q12766 1538 aa9.79□□□□□ -0.84
ZEB1-220ENST00000560909 ZBTB47Q9UFB7 747 aaPredicted RBP9.79□□□□□ -0.84
ZEB1-220ENST00000560909 WIZO95785 1651 aa9.78□□□□□ -0.84
ZEB1-220ENST00000560909 SUPT5HO00267 1087 aaKnown RBP9.77□□□□□ -0.85
ZEB1-220ENST00000560909 BAZ1BQ9UIG0 1483 aaKnown RBP9.75□□□□□ -0.85
ZEB1-220ENST00000560909 TOP2AP11388 1531 aaKnown RBP9.75□□□□□ -0.85
ZEB1-220ENST00000560909 ZNF316A6NFI3 1004 aaPredicted RBP9.74□□□□□ -0.85
ZEB1-220ENST00000560909 ARSIQ5FYB1 569 aa9.72□□□□□ -0.85
ZEB1-220ENST00000560909 PBX2P40425 430 aa9.71□□□□□ -0.86
ZEB1-220ENST00000560909 CSRNP3Q8WYN3 585 aa9.7□□□□□ -0.86
ZEB1-220ENST00000560909 POTEEQ6S8J3 1075 aa9.69□□□□□ -0.86
ZEB1-220ENST00000560909 AXIN2Q9Y2T1 843 aa9.69□□□□□ -0.86
ZEB1-220ENST00000560909 A0A0G2JS52 829 aa9.67□□□□□ -0.86
ZEB1-220ENST00000560909 EHMT2Q96KQ7 1210 aa9.67□□□□□ -0.86
ZEB1-220ENST00000560909 IFFO2Q5TF58 517 aa9.66□□□□□ -0.86
ZEB1-220ENST00000560909 ZNF467Q7Z7K2 595 aaPredicted RBP9.66□□□□□ -0.86
ZEB1-220ENST00000560909 CCDC88BA6NC98 1476 aa9.66□□□□□ -0.86
ZEB1-220ENST00000560909 KHSRPQ92945 711 aaKnown RBP eCLIP9.65□□□□□ -0.86
ZEB1-220ENST00000560909 ADGRD1Q6QNK2 874 aa9.64□□□□□ -0.87
ZEB1-220ENST00000560909 PSEN1P49768 467 aa9.63□□□□□ -0.87
ZEB1-220ENST00000560909 KCTD12Q96CX2 325 aaKnown RBP9.63□□□□□ -0.87
ZEB1-220ENST00000560909 TMEM92Q6UXU6 159 aa9.61□□□□□ -0.87
ZEB1-220ENST00000560909 LCE2BO14633 110 aa9.58□□□□□ -0.88
ZEB1-220ENST00000560909 CADPSQ9ULU8 1353 aa9.58□□□□□ -0.88
ZEB1-220ENST00000560909 CFTRP13569 1480 aa9.57□□□□□ -0.88
ZEB1-220ENST00000560909 CABP2Q9NPB3 220 aa9.54□□□□□ -0.88
ZEB1-220ENST00000560909 TRAF7Q6Q0C0 670 aa9.53□□□□□ -0.88
ZEB1-220ENST00000560909 HRO43593 1189 aa9.52□□□□□ -0.89
ZEB1-220ENST00000560909 PTPN5P54829 565 aa9.52□□□□□ -0.89
ZEB1-220ENST00000560909 LAMC3Q9Y6N6 1575 aa9.5□□□□□ -0.89
ZEB1-220ENST00000560909 NESP48681 1621 aa9.47□□□□□ -0.89
ZEB1-220ENST00000560909 MICALL2Q8IY33 904 aa9.47□□□□□ -0.89
ZEB1-220ENST00000560909 TK2O00142 265 aa9.46□□□□□ -0.9
ZEB1-220ENST00000560909 ARHGAP33O14559 1287 aa9.46□□□□□ -0.9
ZEB1-220ENST00000560909 LOC100996750A0A140TA64 210 aa9.45□□□□□ -0.9
ZEB1-220ENST00000560909 NUDT7P0C024 238 aa9.45□□□□□ -0.9
ZEB1-220ENST00000560909 KRTAP4-6Q9BYQ5 205 aa9.45□□□□□ -0.9
ZEB1-220ENST00000560909 LHX6Q9UPM6 363 aa9.45□□□□□ -0.9
ZEB1-220ENST00000560909 PDS5BQ9NTI5 1447 aa9.45□□□□□ -0.9
ZEB1-220ENST00000560909 PDAP1Q13442 181 aaKnown RBP9.44□□□□□ -0.9
ZEB1-220ENST00000560909 LAPTM4AQ15012 233 aa9.44□□□□□ -0.9
ZEB1-220ENST00000560909 ZNF775Q96BV0 537 aaPredicted RBP9.44□□□□□ -0.9
ZEB1-220ENST00000560909 STAC3Q96MF2 364 aa9.44□□□□□ -0.9
ZEB1-220ENST00000560909 FANCD2Q9BXW9 1451 aa9.41□□□□□ -0.9
ZEB1-220ENST00000560909 DMRTA1Q5VZB9 504 aa9.39□□□□□ -0.91
ZEB1-220ENST00000560909 ZNF787Q6DD87 383 aa9.39□□□□□ -0.91
ZEB1-220ENST00000560909 CEP164Q9UPV0 1460 aa9.36□□□□□ -0.91
ZEB1-220ENST00000560909 CHRM1P11229 460 aaPredicted RBP9.36□□□□□ -0.91
ZEB1-220ENST00000560909 PRDM2Q13029 1718 aa9.36□□□□□ -0.91
ZEB1-220ENST00000560909 GFRA3O60609 400 aa9.34□□□□□ -0.91
ZEB1-220ENST00000560909 ABCC8Q09428 1581 aa9.33□□□□□ -0.92
ZEB1-220ENST00000560909 WRNQ14191 1432 aaPredicted RBP eCLIP9.33□□□□□ -0.92
ZEB1-220ENST00000560909 PSEN2P49810 448 aa9.33□□□□□ -0.92
ZEB1-220ENST00000560909 GSE1Q14687 1217 aa9.32□□□□□ -0.92
ZEB1-220ENST00000560909 MRC2Q9UBG0 1479 aa9.32□□□□□ -0.92
ZEB1-220ENST00000560909 URB2Q14146 1524 aaKnown RBP9.31□□□□□ -0.92
ZEB1-220ENST00000560909 ERCC6Q03468 1493 aa9.31□□□□□ -0.92
ZEB1-220ENST00000560909 CUX1P39880 1505 aa9.31□□□□□ -0.92
ZEB1-220ENST00000560909 TOPBP1Q92547 1522 aa9.3□□□□□ -0.92
ZEB1-220ENST00000560909 KIF21AQ7Z4S6 1674 aa9.29□□□□□ -0.92
ZEB1-220ENST00000560909 WDR62O43379 1518 aa9.29□□□□□ -0.92
ZEB1-220ENST00000560909 DNMBPQ6XZF7 1577 aa9.29□□□□□ -0.92
ZEB1-220ENST00000560909 THSD4Q6ZMP0 1018 aa9.28□□□□□ -0.92
ZEB1-220ENST00000560909 TOP2BQ02880 1626 aa9.27□□□□□ -0.92
ZEB1-220ENST00000560909 EFCAB3Q8N7B9 438 aa9.27□□□□□ -0.93
ZEB1-220ENST00000560909 THOC2Q8NI27 1593 aaKnown RBP9.27□□□□□ -0.93
ZEB1-220ENST00000560909 SYNJ1O43426 1573 aa9.26□□□□□ -0.93
ZEB1-220ENST00000560909 BIVM-ERCC5R4GMW8 1640 aa9.25□□□□□ -0.93
ZEB1-220ENST00000560909 TRIM41Q8WV44 630 aa9.25□□□□□ -0.93
ZEB1-220ENST00000560909 PCDHGA4Q9Y5G9 962 aa9.24□□□□□ -0.93
ZEB1-220ENST00000560909 CUX2O14529 1486 aa9.23□□□□□ -0.93
ZEB1-220ENST00000560909 POLA1P09884 1462 aaPredicted RBP9.23□□□□□ -0.93
ZEB1-220ENST00000560909 PSDA5PKW4 1024 aaPredicted RBP9.23□□□□□ -0.93
ZEB1-220ENST00000560909 FGD5Q6ZNL6 1462 aa9.22□□□□□ -0.93
ZEB1-220ENST00000560909 SOGA1O94964 1423 aa9.21□□□□□ -0.94
ZEB1-220ENST00000560909 IFT140Q96RY7 1462 aa9.2□□□□□ -0.94
ZEB1-220ENST00000560909 ABCA10Q8WWZ4 1543 aa9.19□□□□□ -0.94
ZEB1-220ENST00000560909 NRG2O14511 850 aaPredicted RBP9.18□□□□□ -0.94
ZEB1-220ENST00000560909 ITGBL1O95965 494 aaPredicted RBP9.18□□□□□ -0.94
ZEB1-220ENST00000560909 RAD54L2Q9Y4B4 1467 aa9.17□□□□□ -0.94
ZEB1-220ENST00000560909 TARBP1Q13395 1621 aaKnown RBP9.16□□□□□ -0.94
ZEB1-220ENST00000560909 VPS9D1Q9Y2B5 631 aa9.16□□□□□ -0.94
ZEB1-220ENST00000560909 WNT2BQ93097 391 aa9.15□□□□□ -0.94
ZEB1-220ENST00000560909 MS4A4AQ96JQ5 239 aa9.14□□□□□ -0.95
ZEB1-220ENST00000560909 EEA1Q15075 1411 aa9.14□□□□□ -0.95
ZEB1-220ENST00000560909 SLC34A2O95436 690 aa9.13□□□□□ -0.95
ZEB1-220ENST00000560909 KIF27Q86VH2 1401 aa9.13□□□□□ -0.95
ZEB1-220ENST00000560909 WDR97A6NE52 1622 aa9.13□□□□□ -0.95
ZEB1-220ENST00000560909 IGF1RP08069 1367 aa9.12□□□□□ -0.95
ZEB1-220ENST00000560909 GOLGA8CPA6NN73 597 aa9.12□□□□□ -0.95
ZEB1-220ENST00000560909 KCNK17Q96T54 332 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms