RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 ABCB7O75027 752 aa11.16□□□□□ -0.62
CTDSPL2-210ENST00000560834 ARID3CA6NKF2 412 aa11.15□□□□□ -0.62
CTDSPL2-210ENST00000560834 ABCA9Q8IUA7 1624 aa11.13□□□□□ -0.63
CTDSPL2-210ENST00000560834 TTC37Q6PGP7 1564 aa11.13□□□□□ -0.63
CTDSPL2-210ENST00000560834 TROQ12816 1431 aaPredicted RBP11.13□□□□□ -0.63
CTDSPL2-210ENST00000560834 LRRC9Q6ZRR7 1453 aa11.12□□□□□ -0.63
CTDSPL2-210ENST00000560834 GLI2P10070 1586 aa11.12□□□□□ -0.63
CTDSPL2-210ENST00000560834 ATP1B4Q9UN42 357 aaPredicted RBP11.12□□□□□ -0.63
CTDSPL2-210ENST00000560834 MAP3K4Q9Y6R4 1608 aa11.12□□□□□ -0.63
CTDSPL2-210ENST00000560834 SUPT6HQ7KZ85 1726 aaKnown RBP11.12□□□□□ -0.63
CTDSPL2-210ENST00000560834 ABCC10Q5T3U5 1492 aa11.12□□□□□ -0.63
CTDSPL2-210ENST00000560834 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.11□□□□□ -0.63
CTDSPL2-210ENST00000560834 TRHP20396 242 aaPredicted RBP11.11□□□□□ -0.63
CTDSPL2-210ENST00000560834 NPM1P06748 294 aaKnown RBP eCLIP11.1□□□□□ -0.63
CTDSPL2-210ENST00000560834 PPRC1Q5VV67 1664 aaKnown RBP11.1□□□□□ -0.63
CTDSPL2-210ENST00000560834 MYO5CQ9NQX4 1742 aa11.09□□□□□ -0.63
CTDSPL2-210ENST00000560834 CDC42BPAQ5VT25 1732 aa11.09□□□□□ -0.63
CTDSPL2-210ENST00000560834 PREX2Q70Z35 1606 aa11.09□□□□□ -0.63
CTDSPL2-210ENST00000560834 ZNF219Q9P2Y4 722 aaPredicted RBP11.08□□□□□ -0.64
CTDSPL2-210ENST00000560834 ITSN2Q9NZM3 1697 aa11.08□□□□□ -0.64
CTDSPL2-210ENST00000560834 MTUS2Q5JR59 1369 aa11.07□□□□□ -0.64
CTDSPL2-210ENST00000560834 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.07□□□□□ -0.64
CTDSPL2-210ENST00000560834 HAX1O00165 279 aa11.07□□□□□ -0.64
CTDSPL2-210ENST00000560834 HNRNPUL2Q1KMD3 747 aaKnown RBP11.07□□□□□ -0.64
CTDSPL2-210ENST00000560834 CDC42BPBQ9Y5S2 1711 aa11.06□□□□□ -0.64
CTDSPL2-210ENST00000560834 NCOA2Q15596 1464 aa11.06□□□□□ -0.64
CTDSPL2-210ENST00000560834 SLC4A2P04920 1241 aa11.05□□□□□ -0.64
CTDSPL2-210ENST00000560834 KANK4Q5T7N3 995 aaPredicted RBP11.05□□□□□ -0.64
CTDSPL2-210ENST00000560834 PLEKHD1A6NEE1 506 aa11.04□□□□□ -0.64
CTDSPL2-210ENST00000560834 CDK11AQ9UQ88 783 aaPredicted RBP11.04□□□□□ -0.64
CTDSPL2-210ENST00000560834 ARAP3Q8WWN8 1544 aa11.04□□□□□ -0.64
CTDSPL2-210ENST00000560834 APLP2Q06481 763 aa11.03□□□□□ -0.64
CTDSPL2-210ENST00000560834 TSPOAP1O95153 1857 aa11.03□□□□□ -0.64
CTDSPL2-210ENST00000560834 CFAP74Q9C0B2 1584 aa11.02□□□□□ -0.65
CTDSPL2-210ENST00000560834 GPATCH8Q9UKJ3 1502 aaKnown RBP11□□□□□ -0.65
CTDSPL2-210ENST00000560834 SAMD9LQ8IVG5 1584 aa10.99□□□□□ -0.65
CTDSPL2-210ENST00000560834 KCNH8Q96L42 1107 aa10.99□□□□□ -0.65
CTDSPL2-210ENST00000560834 PHLDB1Q86UU1 1377 aa10.99□□□□□ -0.65
CTDSPL2-210ENST00000560834 CD109Q6YHK3 1445 aa10.99□□□□□ -0.65
CTDSPL2-210ENST00000560834 ARHGAP5Q13017 1502 aa10.99□□□□□ -0.65
CTDSPL2-210ENST00000560834 FAM69CQ0P6D2 419 aa10.98□□□□□ -0.65
CTDSPL2-210ENST00000560834 PLCH2O75038 1416 aa10.98□□□□□ -0.65
CTDSPL2-210ENST00000560834 MYOM3Q5VTT5 1437 aa10.98□□□□□ -0.65
CTDSPL2-210ENST00000560834 ABCC1P33527 1531 aa10.98□□□□□ -0.65
CTDSPL2-210ENST00000560834 PTPN23Q9H3S7 1636 aa10.96□□□□□ -0.65
CTDSPL2-210ENST00000560834 FANCAO15360 1455 aa10.96□□□□□ -0.65
CTDSPL2-210ENST00000560834 TEX14Q8IWB6 1497 aa10.96□□□□□ -0.65
CTDSPL2-210ENST00000560834 CCNB3Q8WWL7 1395 aa10.96□□□□□ -0.65
CTDSPL2-210ENST00000560834 NEO1Q92859 1461 aa10.95□□□□□ -0.66
CTDSPL2-210ENST00000560834 FRMPD1Q5SYB0 1578 aa10.94□□□□□ -0.66
CTDSPL2-210ENST00000560834 CAMSAP2Q08AD1 1489 aa10.94□□□□□ -0.66
CTDSPL2-210ENST00000560834 TCOF1Q13428 1488 aaKnown RBP10.94□□□□□ -0.66
CTDSPL2-210ENST00000560834 FGD6Q6ZV73 1430 aa10.94□□□□□ -0.66
CTDSPL2-210ENST00000560834 PPARGC1BQ86YN6 1023 aaKnown RBP10.94□□□□□ -0.66
CTDSPL2-210ENST00000560834 RICTORQ6R327 1708 aa10.94□□□□□ -0.66
CTDSPL2-210ENST00000560834 CROCC2H7BZ55 1655 aa10.94□□□□□ -0.66
CTDSPL2-210ENST00000560834 SYCP2Q9BX26 1530 aa10.94□□□□□ -0.66
CTDSPL2-210ENST00000560834 MIA2Q96PC5 1412 aa10.93□□□□□ -0.66
CTDSPL2-210ENST00000560834 MYCNP04198 464 aaPredicted RBP10.92□□□□□ -0.66
CTDSPL2-210ENST00000560834 LHX8Q68G74 356 aa10.92□□□□□ -0.66
CTDSPL2-210ENST00000560834 RRBP1Q9P2E9 1410 aaKnown RBP10.92□□□□□ -0.66
CTDSPL2-210ENST00000560834 ARHGEF12Q9NZN5 1544 aa10.91□□□□□ -0.66
CTDSPL2-210ENST00000560834 PIP4P2Q8N4L2 257 aa10.91□□□□□ -0.66
CTDSPL2-210ENST00000560834 ADGRL1O94910 1474 aa10.91□□□□□ -0.66
CTDSPL2-210ENST00000560834 AKNAQ7Z591 1439 aa10.91□□□□□ -0.66
CTDSPL2-210ENST00000560834 KDM6BO15054 1643 aa10.91□□□□□ -0.66
CTDSPL2-210ENST00000560834 DNMT1P26358 1616 aaKnown RBP10.91□□□□□ -0.66
CTDSPL2-210ENST00000560834 ARHGEF5Q12774 1597 aa10.9□□□□□ -0.66
CTDSPL2-210ENST00000560834 KDM5CP41229 1560 aa10.9□□□□□ -0.67
CTDSPL2-210ENST00000560834 PLEKHH2Q8IVE3 1493 aa10.89□□□□□ -0.67
CTDSPL2-210ENST00000560834 ATXN8OSP0DMR3 200 aa10.89□□□□□ -0.67
CTDSPL2-210ENST00000560834 ZMYM4Q5VZL5 1548 aa10.89□□□□□ -0.67
CTDSPL2-210ENST00000560834 MBD5Q9P267 1494 aa10.88□□□□□ -0.67
CTDSPL2-210ENST00000560834 POGZQ7Z3K3 1410 aa10.88□□□□□ -0.67
CTDSPL2-210ENST00000560834 INO80Q9ULG1 1556 aaPredicted RBP10.88□□□□□ -0.67
CTDSPL2-210ENST00000560834 COL17A1Q9UMD9 1497 aaPredicted RBP10.87□□□□□ -0.67
CTDSPL2-210ENST00000560834 KIAA1107Q9UPP5 1409 aa10.87□□□□□ -0.67
CTDSPL2-210ENST00000560834 CFDP1Q9UEE9 299 aaPredicted RBP10.87□□□□□ -0.67
CTDSPL2-210ENST00000560834 HECW2Q9P2P5 1572 aa10.86□□□□□ -0.67
CTDSPL2-210ENST00000560834 MAST1Q9Y2H9 1570 aa10.86□□□□□ -0.67
CTDSPL2-210ENST00000560834 ADGBQ8N7X0 1667 aa10.86□□□□□ -0.67
CTDSPL2-210ENST00000560834 ZFYVE16Q7Z3T8 1539 aa10.86□□□□□ -0.67
CTDSPL2-210ENST00000560834 EFCAB2Q5VUJ9 269 aa10.86□□□□□ -0.67
CTDSPL2-210ENST00000560834 ZNF518AQ6AHZ1 1483 aa10.86□□□□□ -0.67
CTDSPL2-210ENST00000560834 CCDC141Q6ZP82 1450 aa10.86□□□□□ -0.67
CTDSPL2-210ENST00000560834 ZNF644Q9H582 1327 aaPredicted RBP10.85□□□□□ -0.67
CTDSPL2-210ENST00000560834 SCAPERQ9BY12 1400 aa10.85□□□□□ -0.67
CTDSPL2-210ENST00000560834 TRAPPC8Q9Y2L5 1435 aa10.85□□□□□ -0.67
CTDSPL2-210ENST00000560834 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.85□□□□□ -0.67
CTDSPL2-210ENST00000560834 DENND4BO75064 1496 aaPredicted RBP10.85□□□□□ -0.67
CTDSPL2-210ENST00000560834 SHANK2Q9UPX8 1470 aa10.85□□□□□ -0.67
CTDSPL2-210ENST00000560834 KIDINS220Q9ULH0 1771 aa10.85□□□□□ -0.67
CTDSPL2-210ENST00000560834 ABCA6Q8N139 1617 aa10.84□□□□□ -0.67
CTDSPL2-210ENST00000560834 ARHGEF40Q8TER5 1519 aa10.84□□□□□ -0.67
CTDSPL2-210ENST00000560834 DAPK1P53355 1430 aa10.84□□□□□ -0.67
CTDSPL2-210ENST00000560834 PLXNC1O60486 1568 aa10.83□□□□□ -0.68
CTDSPL2-210ENST00000560834 ATP7AQ04656 1500 aa10.83□□□□□ -0.68
CTDSPL2-210ENST00000560834 ZNF777Q9ULD5 760 aaPredicted RBP10.82□□□□□ -0.68
CTDSPL2-210ENST00000560834 ABCC5O15440 1437 aa10.82□□□□□ -0.68
CTDSPL2-210ENST00000560834 DIP2CQ9Y2E4 1556 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms