RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-208ENST00000560734 CFDP1Q9UEE9 299 aaPredicted RBP36.57■■■■□ 3.45
SHF-208ENST00000560734 CAMSAP2Q08AD1 1489 aa36.57■■■■□ 3.44
SHF-208ENST00000560734 ERCC6L2Q5T890 1561 aa36.53■■■■□ 3.44
SHF-208ENST00000560734 UHRF1BP1LA0JNW5 1464 aa36.53■■■■□ 3.44
SHF-208ENST00000560734 CDC42BPAQ5VT25 1732 aa36.51■■■■□ 3.44
SHF-208ENST00000560734 DIEXFQ68CQ4 756 aaKnown RBP36.49■■■■□ 3.43
SHF-208ENST00000560734 ZNF644Q9H582 1327 aaPredicted RBP36.46■■■■□ 3.43
SHF-208ENST00000560734 RRP7BPQ9NSQ0 103 aa36.45■■■■□ 3.43
SHF-208ENST00000560734 CHIC2Q9UKJ5 165 aa36.45■■■■□ 3.43
SHF-208ENST00000560734 ADGRL2O95490 1459 aa36.44■■■■□ 3.42
SHF-208ENST00000560734 CROCC2H7BZ55 1655 aa36.43■■■■□ 3.42
SHF-208ENST00000560734 ADGBQ8N7X0 1667 aa36.41■■■■□ 3.42
SHF-208ENST00000560734 SHANK2Q9UPX8 1470 aa36.39■■■■□ 3.42
SHF-208ENST00000560734 KDM5BQ9UGL1 1544 aa36.35■■■■□ 3.41
SHF-208ENST00000560734 KDM6BO15054 1643 aa36.34■■■■□ 3.41
SHF-208ENST00000560734 PREX2Q70Z35 1606 aa36.34■■■■□ 3.41
SHF-208ENST00000560734 NCOA1Q15788 1441 aa36.33■■■■□ 3.41
SHF-208ENST00000560734 ARHGEF5Q12774 1597 aa36.33■■■■□ 3.41
SHF-208ENST00000560734 RIMBP3CA6NJZ7 1639 aa36.32■■■■□ 3.4
SHF-208ENST00000560734 RIMBP3BA6NNM3 1639 aa36.32■■■■□ 3.4
SHF-208ENST00000560734 RIMBP3Q9UFD9 1639 aa36.32■■■■□ 3.4
SHF-208ENST00000560734 SIN3AQ96ST3 1273 aa36.31■■■■□ 3.4
SHF-208ENST00000560734 ANKRD30AQ9BXX3 1397 aa36.27■■■■□ 3.4
SHF-208ENST00000560734 ZCCHC11Q5TAX3 1644 aaKnown RBP36.26■■■■□ 3.39
SHF-208ENST00000560734 RSPH4AQ5TD94 716 aa36.25■■■■□ 3.39
SHF-208ENST00000560734 ZNF777Q9ULD5 760 aaPredicted RBP36.25■■■■□ 3.39
SHF-208ENST00000560734 CDC42BPBQ9Y5S2 1711 aa36.24■■■■□ 3.39
SHF-208ENST00000560734 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.24■■■■□ 3.39
SHF-208ENST00000560734 DENND4BO75064 1496 aaPredicted RBP36.23■■■■□ 3.39
SHF-208ENST00000560734 NEUROD1Q13562 356 aa36.22■■■■□ 3.39
SHF-208ENST00000560734 MBD5Q9P267 1494 aa36.2■■■■□ 3.39
SHF-208ENST00000560734 TRIM52Q96A61 297 aa36.19■■■■□ 3.38
SHF-208ENST00000560734 MPHOSPH9Q99550 1183 aa36.19■■■■□ 3.38
SHF-208ENST00000560734 TTC37Q6PGP7 1564 aa36.18■■■■□ 3.38
SHF-208ENST00000560734 SAMD9LQ8IVG5 1584 aa36.18■■■■□ 3.38
SHF-208ENST00000560734 PPP1R15AO75807 674 aaPredicted RBP36.17■■■■□ 3.38
SHF-208ENST00000560734 C9orf84Q5VXU9 1444 aa36.17■■■■□ 3.38
SHF-208ENST00000560734 TONSLQ96HA7 1378 aa36.16■■■■□ 3.38
SHF-208ENST00000560734 PLEKHH2Q8IVE3 1493 aa36.16■■■■□ 3.38
SHF-208ENST00000560734 MYO5CQ9NQX4 1742 aa36.15■■■■□ 3.38
SHF-208ENST00000560734 CCDC141Q6ZP82 1450 aa36.13■■■■□ 3.37
SHF-208ENST00000560734 KIAA1107Q9UPP5 1409 aa36.12■■■■□ 3.37
SHF-208ENST00000560734 TSPY4P0CV99 314 aa36.12■■■■□ 3.37
SHF-208ENST00000560734 TSPY10P0CW01 314 aa36.12■■■■□ 3.37
SHF-208ENST00000560734 ARHGAP5Q13017 1502 aa36.08■■■■□ 3.37
SHF-208ENST00000560734 MAST1Q9Y2H9 1570 aa36.07■■■■□ 3.37
SHF-208ENST00000560734 ANKRD50Q9ULJ7 1429 aa36.07■■■■□ 3.36
SHF-208ENST00000560734 PLCH2O75038 1416 aa36.06■■■■□ 3.36
SHF-208ENST00000560734 ARAP3Q8WWN8 1544 aa36.06■■■■□ 3.36
SHF-208ENST00000560734 ANKRD30BQ9BXX2 1392 aa36.01■■■■□ 3.36
SHF-208ENST00000560734 PZPP20742 1482 aa36.01■■■■□ 3.35
SHF-208ENST00000560734 HNRNPMP52272 730 aaKnown RBP eCLIP36■■■■□ 3.35
SHF-208ENST00000560734 KDM5DQ9BY66 1539 aa35.98■■■■□ 3.35
SHF-208ENST00000560734 SYCP2Q9BX26 1530 aa35.96■■■■□ 3.35
SHF-208ENST00000560734 WDR7Q9Y4E6 1490 aa35.95■■■■□ 3.35
SHF-208ENST00000560734 SLC4A1APQ9BWU0 796 aaKnown RBP35.95■■■■□ 3.35
SHF-208ENST00000560734 KIF15Q9NS87 1388 aa35.94■■■■□ 3.34
SHF-208ENST00000560734 RPRD2Q5VT52 1461 aaKnown RBP35.93■■■■□ 3.34
SHF-208ENST00000560734 EFCAB2Q5VUJ9 269 aa35.92■■■■□ 3.34
SHF-208ENST00000560734 KCNH8Q96L42 1107 aa35.91■■■■□ 3.34
SHF-208ENST00000560734 PLXNC1O60486 1568 aa35.9■■■■□ 3.34
SHF-208ENST00000560734 CYB5RLQ6IPT4 315 aa35.88■■■■□ 3.33
SHF-208ENST00000560734 ABCC1P33527 1531 aa35.85■■■■□ 3.33
SHF-208ENST00000560734 ABCA9Q8IUA7 1624 aa35.83■■■■□ 3.33
SHF-208ENST00000560734 ARHGEF12Q9NZN5 1544 aa35.79■■■■□ 3.32
SHF-208ENST00000560734 NUP155O75694 1391 aa35.77■■■■□ 3.32
SHF-208ENST00000560734 MIER1Q8N108 512 aa35.76■■■■□ 3.31
SHF-208ENST00000560734 ASXL2Q76L83 1435 aa35.74■■■■□ 3.31
SHF-208ENST00000560734 FOXD1Q16676 465 aa35.74■■■■□ 3.31
SHF-208ENST00000560734 DUOX2Q9NRD8 1548 aa35.74■■■■□ 3.31
SHF-208ENST00000560734 TEX14Q8IWB6 1497 aa35.73■■■■□ 3.31
SHF-208ENST00000560734 UNC13BO14795 1591 aa35.72■■■■□ 3.31
SHF-208ENST00000560734 RTEL1-TNFRSF6BF6WH68 1400 aa35.72■■■■□ 3.31
SHF-208ENST00000560734 PKD2Q13563 968 aa35.7■■■■□ 3.31
SHF-208ENST00000560734 ERBINQ96RT1 1412 aa35.69■■■■□ 3.3
SHF-208ENST00000560734 L3MBTL2Q969R5 705 aa35.69■■■■□ 3.3
SHF-208ENST00000560734 NPM1P06748 294 aaKnown RBP eCLIP35.67■■■■□ 3.3
SHF-208ENST00000560734 CENPBP07199 599 aaPredicted RBP35.63■■■■□ 3.29
SHF-208ENST00000560734 FANCAO15360 1455 aa35.63■■■■□ 3.29
SHF-208ENST00000560734 FAM135AQ9P2D6 1515 aa35.63■■■■□ 3.29
SHF-208ENST00000560734 TRAPPC8Q9Y2L5 1435 aa35.62■■■■□ 3.29
SHF-208ENST00000560734 MAGI2Q86UL8 1455 aa35.61■■■■□ 3.29
SHF-208ENST00000560734 IQGAP3Q86VI3 1631 aa35.57■■■■□ 3.28
SHF-208ENST00000560734 ZFYVE16Q7Z3T8 1539 aa35.54■■■■□ 3.28
SHF-208ENST00000560734 SPAG9O60271 1321 aaKnown RBP35.53■■■■□ 3.28
SHF-208ENST00000560734 CFAP74Q9C0B2 1584 aa35.49■■■■□ 3.27
SHF-208ENST00000560734 INO80Q9ULG1 1556 aaPredicted RBP35.49■■■■□ 3.27
SHF-208ENST00000560734 ADGRL1O94910 1474 aa35.48■■■■□ 3.27
SHF-208ENST00000560734 EIF4G2P78344 907 aaKnown RBP eCLIP35.44■■■■□ 3.26
SHF-208ENST00000560734 ATP7AQ04656 1500 aa35.43■■■■□ 3.26
SHF-208ENST00000560734 ATP10AO60312 1499 aa35.43■■■■□ 3.26
SHF-208ENST00000560734 UHRF1BP1Q6BDS2 1440 aa35.43■■■■□ 3.26
SHF-208ENST00000560734 SCAPERQ9BY12 1400 aa35.42■■■■□ 3.26
SHF-208ENST00000560734 SCAF1Q9H7N4 1312 aaKnown RBP35.41■■■■□ 3.26
SHF-208ENST00000560734 AFAP1Q8N556 730 aa35.4■■■■□ 3.26
SHF-208ENST00000560734 NBPF8Q3BBV2 869 aa35.4■■■■□ 3.26
SHF-208ENST00000560734 CD109Q6YHK3 1445 aa35.37■■■■□ 3.25
SHF-208ENST00000560734 DDX10Q13206 875 aaKnown RBP35.37■■■■□ 3.25
SHF-208ENST00000560734 DEPDC5O75140 1603 aa35.36■■■■□ 3.25
SHF-208ENST00000560734 HSPA5P11021 654 aaKnown RBP35.36■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms