RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.88□□□□□ -0.99
ZEB1-219ENST00000560721 RTEL1-TNFRSF6BF6WH68 1400 aa8.88□□□□□ -0.99
ZEB1-219ENST00000560721 TEX14Q8IWB6 1497 aa8.87□□□□□ -0.99
ZEB1-219ENST00000560721 UNC13BO14795 1591 aa8.87□□□□□ -0.99
ZEB1-219ENST00000560721 FRMPD1Q5SYB0 1578 aa8.87□□□□□ -0.99
ZEB1-219ENST00000560721 VWDEQ8N2E2 1590 aa8.87□□□□□ -0.99
ZEB1-219ENST00000560721 LMTK2Q8IWU2 1503 aa8.85□□□□□ -0.99
ZEB1-219ENST00000560721 PTPRGP23470 1445 aa8.84□□□□□ -0.99
ZEB1-219ENST00000560721 TTC37Q6PGP7 1564 aa8.84□□□□□ -0.99
ZEB1-219ENST00000560721 JPH4Q96JJ6 628 aa8.83□□□□□ -1
ZEB1-219ENST00000560721 FHOD3Q2V2M9 1422 aa8.83□□□□□ -1
ZEB1-219ENST00000560721 SAMD9LQ8IVG5 1584 aa8.82□□□□□ -1
ZEB1-219ENST00000560721 ROCK1Q13464 1354 aa8.82□□□□□ -1
ZEB1-219ENST00000560721 CHMP7Q8WUX9 453 aaPredicted RBP8.82□□□□□ -1
ZEB1-219ENST00000560721 NCOA2Q15596 1464 aa8.82□□□□□ -1
ZEB1-219ENST00000560721 MLH3Q9UHC1 1453 aa8.82□□□□□ -1
ZEB1-219ENST00000560721 PLCH2O75038 1416 aa8.82□□□□□ -1
ZEB1-219ENST00000560721 CAMSAP2Q08AD1 1489 aa8.81□□□□□ -1
ZEB1-219ENST00000560721 ARHGEF40Q8TER5 1519 aa8.81□□□□□ -1
ZEB1-219ENST00000560721 HRCP23327 699 aa8.79□□□□□ -1
ZEB1-219ENST00000560721 HECW2Q9P2P5 1572 aa8.79□□□□□ -1
ZEB1-219ENST00000560721 IQGAP3Q86VI3 1631 aa8.78□□□□□ -1
ZEB1-219ENST00000560721 DNAJC5Q9H3Z4 198 aa8.78□□□□□ -1
ZEB1-219ENST00000560721 PRDM15P57071 1507 aaPredicted RBP8.77□□□□□ -1.01
ZEB1-219ENST00000560721 GPATCH8Q9UKJ3 1502 aaKnown RBP8.76□□□□□ -1.01
ZEB1-219ENST00000560721 MYOM3Q5VTT5 1437 aa8.76□□□□□ -1.01
ZEB1-219ENST00000560721 ZFYVE16Q7Z3T8 1539 aa8.76□□□□□ -1.01
ZEB1-219ENST00000560721 KIDINS220Q9ULH0 1771 aa8.76□□□□□ -1.01
ZEB1-219ENST00000560721 MROH1Q8NDA8 1641 aa8.76□□□□□ -1.01
ZEB1-219ENST00000560721 MBD5Q9P267 1494 aa8.75□□□□□ -1.01
ZEB1-219ENST00000560721 ZNF142P52746 1687 aaPredicted RBP8.74□□□□□ -1.01
ZEB1-219ENST00000560721 RSPH4AQ5TD94 716 aa8.74□□□□□ -1.01
ZEB1-219ENST00000560721 ASXL2Q76L83 1435 aa8.74□□□□□ -1.01
ZEB1-219ENST00000560721 ATP10AO60312 1499 aa8.73□□□□□ -1.01
ZEB1-219ENST00000560721 ERBINQ96RT1 1412 aa8.72□□□□□ -1.01
ZEB1-219ENST00000560721 DUOX2Q9NRD8 1548 aa8.72□□□□□ -1.01
ZEB1-219ENST00000560721 KDM6BO15054 1643 aa8.72□□□□□ -1.01
ZEB1-219ENST00000560721 DIP2CQ9Y2E4 1556 aa8.71□□□□□ -1.02
ZEB1-219ENST00000560721 TET3O43151 1660 aa8.7□□□□□ -1.02
ZEB1-219ENST00000560721 ADAMTSL3P82987 1691 aa8.7□□□□□ -1.02
ZEB1-219ENST00000560721 POGZQ7Z3K3 1410 aa8.7□□□□□ -1.02
ZEB1-219ENST00000560721 ZNF518AQ6AHZ1 1483 aa8.7□□□□□ -1.02
ZEB1-219ENST00000560721 PIK3C2BO00750 1634 aa8.7□□□□□ -1.02
ZEB1-219ENST00000560721 CDK13Q14004 1512 aaKnown RBP8.7□□□□□ -1.02
ZEB1-219ENST00000560721 FAM9AQ8IZU1 332 aaPredicted RBP8.7□□□□□ -1.02
ZEB1-219ENST00000560721 FGD6Q6ZV73 1430 aa8.69□□□□□ -1.02
ZEB1-219ENST00000560721 CCDC141Q6ZP82 1450 aa8.69□□□□□ -1.02
ZEB1-219ENST00000560721 ABCA6Q8N139 1617 aa8.68□□□□□ -1.02
ZEB1-219ENST00000560721 RPRD2Q5VT52 1461 aaKnown RBP8.68□□□□□ -1.02
ZEB1-219ENST00000560721 LAMC1P11047 1609 aa8.68□□□□□ -1.02
ZEB1-219ENST00000560721 SLC24A1O60721 1099 aa8.68□□□□□ -1.02
ZEB1-219ENST00000560721 ARHGEF12Q9NZN5 1544 aa8.68□□□□□ -1.02
ZEB1-219ENST00000560721 IFT172Q9UG01 1749 aa8.68□□□□□ -1.02
ZEB1-219ENST00000560721 KIAA1210Q9ULL0 1709 aa8.67□□□□□ -1.02
ZEB1-219ENST00000560721 ARHGAP31Q2M1Z3 1444 aa8.67□□□□□ -1.02
ZEB1-219ENST00000560721 ATP7AQ04656 1500 aa8.66□□□□□ -1.02
ZEB1-219ENST00000560721 PRAG1Q86YV5 1406 aa8.66□□□□□ -1.02
ZEB1-219ENST00000560721 PPP6R1Q9UPN7 881 aa8.65□□□□□ -1.02
ZEB1-219ENST00000560721 CDK11AQ9UQ88 783 aaPredicted RBP8.65□□□□□ -1.03
ZEB1-219ENST00000560721 CEP152O94986 1710 aa8.64□□□□□ -1.03
ZEB1-219ENST00000560721 FER1L4A9Z1Z3 1794 aa8.63□□□□□ -1.03
ZEB1-219ENST00000560721 HFM1A2PYH4 1435 aa8.63□□□□□ -1.03
ZEB1-219ENST00000560721 MADDQ8WXG6 1647 aa8.63□□□□□ -1.03
ZEB1-219ENST00000560721 UGGT1Q9NYU2 1555 aa8.62□□□□□ -1.03
ZEB1-219ENST00000560721 DAPK1P53355 1430 aa8.61□□□□□ -1.03
ZEB1-219ENST00000560721 FANCAO15360 1455 aa8.61□□□□□ -1.03
ZEB1-219ENST00000560721 CAMSAP1Q5T5Y3 1602 aa8.61□□□□□ -1.03
ZEB1-219ENST00000560721 SPATA31D1Q6ZQQ2 1576 aa8.6□□□□□ -1.03
ZEB1-219ENST00000560721 SPHKAPQ2M3C7 1700 aa8.58□□□□□ -1.04
ZEB1-219ENST00000560721 AEBP2Q6ZN18 517 aaPredicted RBP8.58□□□□□ -1.04
ZEB1-219ENST00000560721 C9orf84Q5VXU9 1444 aa8.58□□□□□ -1.04
ZEB1-219ENST00000560721 DENND4BO75064 1496 aaPredicted RBP8.58□□□□□ -1.04
ZEB1-219ENST00000560721 EFCAB6Q5THR3 1501 aa8.58□□□□□ -1.04
ZEB1-219ENST00000560721 SYCP2Q9BX26 1530 aa8.58□□□□□ -1.04
ZEB1-219ENST00000560721 CLSPNQ9HAW4 1339 aa8.58□□□□□ -1.04
ZEB1-219ENST00000560721 CNTLNQ9NXG0 1405 aa8.57□□□□□ -1.04
ZEB1-219ENST00000560721 ARHGAP5Q13017 1502 aa8.57□□□□□ -1.04
ZEB1-219ENST00000560721 CD109Q6YHK3 1445 aa8.57□□□□□ -1.04
ZEB1-219ENST00000560721 SIGLEC1Q9BZZ2 1709 aa8.57□□□□□ -1.04
ZEB1-219ENST00000560721 RIMS1Q86UR5 1692 aaKnown RBP8.57□□□□□ -1.04
ZEB1-219ENST00000560721 ABCC5O15440 1437 aa8.57□□□□□ -1.04
ZEB1-219ENST00000560721 NPATQ14207 1427 aa8.56□□□□□ -1.04
ZEB1-219ENST00000560721 KNDC1Q76NI1 1749 aa8.56□□□□□ -1.04
ZEB1-219ENST00000560721 TRPM2O94759 1503 aa8.55□□□□□ -1.04
ZEB1-219ENST00000560721 DIP2AQ14689 1571 aa8.54□□□□□ -1.04
ZEB1-219ENST00000560721 PREX1Q8TCU6 1659 aa8.54□□□□□ -1.04
ZEB1-219ENST00000560721 ADGRL1O94910 1474 aa8.54□□□□□ -1.04
ZEB1-219ENST00000560721 PTPRTO14522 1441 aa8.54□□□□□ -1.04
ZEB1-219ENST00000560721 POLR1AO95602 1720 aaPredicted RBP8.53□□□□□ -1.04
ZEB1-219ENST00000560721 CCNB3Q8WWL7 1395 aa8.53□□□□□ -1.04
ZEB1-219ENST00000560721 NCOA1Q15788 1441 aa8.53□□□□□ -1.04
ZEB1-219ENST00000560721 E9PCH4 1651 aa8.52□□□□□ -1.05
ZEB1-219ENST00000560721 MYO3AQ8NEV4 1616 aa8.51□□□□□ -1.05
ZEB1-219ENST00000560721 MTUS2Q5JR59 1369 aa8.51□□□□□ -1.05
ZEB1-219ENST00000560721 SETD1AO15047 1707 aaKnown RBP8.51□□□□□ -1.05
ZEB1-219ENST00000560721 ABCC3O15438 1527 aa8.5□□□□□ -1.05
ZEB1-219ENST00000560721 NRXN1Q9ULB1 1477 aa8.5□□□□□ -1.05
ZEB1-219ENST00000560721 PLEKHD1A6NEE1 506 aa8.49□□□□□ -1.05
ZEB1-219ENST00000560721 C3P01024 1663 aa8.49□□□□□ -1.05
ZEB1-219ENST00000560721 PPLO60437 1756 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms