RNA–Protein interactions for RNA: ENST00000560588.5

RMDN3-209, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,202 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-209ENST00000560588 KDM5BQ9UGL1 1544 aa14.64□□□□□ -0.07
RMDN3-209ENST00000560588 PLB1Q6P1J6 1458 aa14.64□□□□□ -0.07
RMDN3-209ENST00000560588 CAMSAP2Q08AD1 1489 aa14.63□□□□□ -0.07
RMDN3-209ENST00000560588 MPHOSPH9Q99550 1183 aa14.63□□□□□ -0.07
RMDN3-209ENST00000560588 GPATCH8Q9UKJ3 1502 aaKnown RBP14.63□□□□□ -0.07
RMDN3-209ENST00000560588 PRG4Q92954 1404 aaPredicted RBP14.62□□□□□ -0.07
RMDN3-209ENST00000560588 ADGRL2O95490 1459 aa14.62□□□□□ -0.07
RMDN3-209ENST00000560588 CROCC2H7BZ55 1655 aa14.62□□□□□ -0.07
RMDN3-209ENST00000560588 ARID3CA6NKF2 412 aa14.62□□□□□ -0.07
RMDN3-209ENST00000560588 DENND4BO75064 1496 aaPredicted RBP14.62□□□□□ -0.07
RMDN3-209ENST00000560588 FBLN2P98095 1184 aa14.61□□□□□ -0.07
RMDN3-209ENST00000560588 KIF14Q15058 1648 aa14.61□□□□□ -0.07
RMDN3-209ENST00000560588 CCER2I3L3R5 266 aa14.61□□□□□ -0.07
RMDN3-209ENST00000560588 CFDP1Q9UEE9 299 aaPredicted RBP14.61□□□□□ -0.07
RMDN3-209ENST00000560588 DDX10Q13206 875 aaKnown RBP14.6□□□□□ -0.07
RMDN3-209ENST00000560588 SHANK2Q9UPX8 1470 aa14.58□□□□□ -0.08
RMDN3-209ENST00000560588 PLEKHD1A6NEE1 506 aa14.57□□□□□ -0.08
RMDN3-209ENST00000560588 ANKRD30BQ9BXX2 1392 aa14.57□□□□□ -0.08
RMDN3-209ENST00000560588 RPRD2Q5VT52 1461 aaKnown RBP14.56□□□□□ -0.08
RMDN3-209ENST00000560588 ANP32CO43423 234 aa14.56□□□□□ -0.08
RMDN3-209ENST00000560588 ANKRD30AQ9BXX3 1397 aa14.56□□□□□ -0.08
RMDN3-209ENST00000560588 ABCC10Q5T3U5 1492 aa14.56□□□□□ -0.08
RMDN3-209ENST00000560588 NCOA1Q15788 1441 aa14.56□□□□□ -0.08
RMDN3-209ENST00000560588 CDC42BPAQ5VT25 1732 aa14.55□□□□□ -0.08
RMDN3-209ENST00000560588 ATP10BO94823 1461 aa14.55□□□□□ -0.08
RMDN3-209ENST00000560588 ZNF644Q9H582 1327 aaPredicted RBP14.55□□□□□ -0.08
RMDN3-209ENST00000560588 PTPRGP23470 1445 aa14.52□□□□□ -0.09
RMDN3-209ENST00000560588 ARHGEF5Q12774 1597 aa14.52□□□□□ -0.09
RMDN3-209ENST00000560588 SHROOM2Q13796 1616 aa14.51□□□□□ -0.09
RMDN3-209ENST00000560588 PZPP20742 1482 aa14.51□□□□□ -0.09
RMDN3-209ENST00000560588 EIF4G2P78344 907 aaKnown RBP eCLIP14.5□□□□□ -0.09
RMDN3-209ENST00000560588 SLC4A1APQ9BWU0 796 aaKnown RBP14.5□□□□□ -0.09
RMDN3-209ENST00000560588 CHD1O14646 1710 aa14.5□□□□□ -0.09
RMDN3-209ENST00000560588 TEX14Q8IWB6 1497 aa14.49□□□□□ -0.09
RMDN3-209ENST00000560588 KIAA1107Q9UPP5 1409 aa14.49□□□□□ -0.09
RMDN3-209ENST00000560588 L3MBTL2Q969R5 705 aa14.49□□□□□ -0.09
RMDN3-209ENST00000560588 KDM5DQ9BY66 1539 aa14.47□□□□□ -0.09
RMDN3-209ENST00000560588 HSPA5P11021 654 aaKnown RBP14.47□□□□□ -0.09
RMDN3-209ENST00000560588 RSPH4AQ5TD94 716 aa14.47□□□□□ -0.09
RMDN3-209ENST00000560588 C9orf84Q5VXU9 1444 aa14.47□□□□□ -0.09
RMDN3-209ENST00000560588 ANKRD50Q9ULJ7 1429 aa14.47□□□□□ -0.09
RMDN3-209ENST00000560588 ZNF777Q9ULD5 760 aaPredicted RBP14.46□□□□□ -0.09
RMDN3-209ENST00000560588 PREX2Q70Z35 1606 aa14.46□□□□□ -0.09
RMDN3-209ENST00000560588 HIRIP3Q9BW71 556 aaPredicted RBP14.46□□□□□ -0.1
RMDN3-209ENST00000560588 TSPY4P0CV99 314 aa14.44□□□□□ -0.1
RMDN3-209ENST00000560588 TSPY10P0CW01 314 aa14.44□□□□□ -0.1
RMDN3-209ENST00000560588 POLR1AO95602 1720 aaPredicted RBP14.44□□□□□ -0.1
RMDN3-209ENST00000560588 CCDC141Q6ZP82 1450 aa14.42□□□□□ -0.1
RMDN3-209ENST00000560588 MBD5Q9P267 1494 aa14.42□□□□□ -0.1
RMDN3-209ENST00000560588 CNTLNQ9NXG0 1405 aa14.41□□□□□ -0.1
RMDN3-209ENST00000560588 FOXD1Q16676 465 aa14.41□□□□□ -0.1
RMDN3-209ENST00000560588 KCNH8Q96L42 1107 aa14.41□□□□□ -0.1
RMDN3-209ENST00000560588 MAST1Q9Y2H9 1570 aa14.41□□□□□ -0.1
RMDN3-209ENST00000560588 ABCC2Q92887 1545 aa14.41□□□□□ -0.1
RMDN3-209ENST00000560588 CDC42BPBQ9Y5S2 1711 aa14.4□□□□□ -0.1
RMDN3-209ENST00000560588 PLEKHH2Q8IVE3 1493 aa14.4□□□□□ -0.1
RMDN3-209ENST00000560588 WASHC2AQ641Q2 1341 aa14.4□□□□□ -0.1
RMDN3-209ENST00000560588 ARHGEF12Q9NZN5 1544 aa14.39□□□□□ -0.11
RMDN3-209ENST00000560588 SAMD9LQ8IVG5 1584 aa14.39□□□□□ -0.11
RMDN3-209ENST00000560588 CCDC7Q96M83 1385 aa14.39□□□□□ -0.11
RMDN3-209ENST00000560588 SUPT16HQ9Y5B9 1047 aaKnown RBP14.38□□□□□ -0.11
RMDN3-209ENST00000560588 SPATA31E1Q6ZUB1 1445 aa14.38□□□□□ -0.11
RMDN3-209ENST00000560588 KIF15Q9NS87 1388 aa14.38□□□□□ -0.11
RMDN3-209ENST00000560588 PKD2Q13563 968 aa14.38□□□□□ -0.11
RMDN3-209ENST00000560588 NUP155O75694 1391 aa14.37□□□□□ -0.11
RMDN3-209ENST00000560588 UHRF1BP1Q6BDS2 1440 aa14.37□□□□□ -0.11
RMDN3-209ENST00000560588 MYO5CQ9NQX4 1742 aa14.36□□□□□ -0.11
RMDN3-209ENST00000560588 NBPF8Q3BBV2 869 aa14.36□□□□□ -0.11
RMDN3-209ENST00000560588 UHRF1BP1LA0JNW5 1464 aa14.36□□□□□ -0.11
RMDN3-209ENST00000560588 ARID4BQ4LE39 1312 aaPredicted RBP14.35□□□□□ -0.11
RMDN3-209ENST00000560588 CLASP1Q7Z460 1538 aa14.34□□□□□ -0.11
RMDN3-209ENST00000560588 PLXNC1O60486 1568 aa14.34□□□□□ -0.11
RMDN3-209ENST00000560588 ARHGAP5Q13017 1502 aa14.33□□□□□ -0.11
RMDN3-209ENST00000560588 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.33□□□□□ -0.11
RMDN3-209ENST00000560588 TTC37Q6PGP7 1564 aa14.32□□□□□ -0.12
RMDN3-209ENST00000560588 UNC13BO14795 1591 aa14.32□□□□□ -0.12
RMDN3-209ENST00000560588 HNRNPMP52272 730 aaKnown RBP eCLIP14.32□□□□□ -0.12
RMDN3-209ENST00000560588 RALGAPBQ86X10 1494 aa14.32□□□□□ -0.12
RMDN3-209ENST00000560588 SYCP2Q9BX26 1530 aa14.3□□□□□ -0.12
RMDN3-209ENST00000560588 NEFLP07196 543 aa14.29□□□□□ -0.12
RMDN3-209ENST00000560588 FAM135AQ9P2D6 1515 aa14.29□□□□□ -0.12
RMDN3-209ENST00000560588 KDM5CP41229 1560 aa14.28□□□□□ -0.12
RMDN3-209ENST00000560588 ZCCHC11Q5TAX3 1644 aaKnown RBP14.28□□□□□ -0.12
RMDN3-209ENST00000560588 USP47Q96K76 1375 aa14.28□□□□□ -0.12
RMDN3-209ENST00000560588 KIF7Q2M1P5 1343 aa14.28□□□□□ -0.12
RMDN3-209ENST00000560588 ROCK2O75116 1388 aaKnown RBP14.27□□□□□ -0.12
RMDN3-209ENST00000560588 ARAP3Q8WWN8 1544 aa14.27□□□□□ -0.12
RMDN3-209ENST00000560588 DUOX2Q9NRD8 1548 aa14.27□□□□□ -0.12
RMDN3-209ENST00000560588 ERCC6L2Q5T890 1561 aa14.27□□□□□ -0.13
RMDN3-209ENST00000560588 PLCH2O75038 1416 aa14.26□□□□□ -0.13
RMDN3-209ENST00000560588 IQGAP3Q86VI3 1631 aa14.26□□□□□ -0.13
RMDN3-209ENST00000560588 ERBINQ96RT1 1412 aa14.25□□□□□ -0.13
RMDN3-209ENST00000560588 C11orf95C9JLR9 678 aaPredicted RBP14.25□□□□□ -0.13
RMDN3-209ENST00000560588 PRKRIP1Q9H875 184 aaPredicted RBP14.25□□□□□ -0.13
RMDN3-209ENST00000560588 EFCAB2Q5VUJ9 269 aa14.23□□□□□ -0.13
RMDN3-209ENST00000560588 MAGI2Q86UL8 1455 aa14.23□□□□□ -0.13
RMDN3-209ENST00000560588 ABCC1P33527 1531 aa14.22□□□□□ -0.13
RMDN3-209ENST00000560588 CCDC144AA2RUR9 1427 aa14.21□□□□□ -0.13
RMDN3-209ENST00000560588 ATP10AO60312 1499 aa14.21□□□□□ -0.13
RMDN3-209ENST00000560588 BCORL1Q5H9F3 1711 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms