RNA–Protein interactions for RNA: ENST00000560542.1

IRF9-210, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-210ENST00000560542 RANGAP1P46060 587 aaPredicted RBP23.93■■□□□ 1.42
IRF9-210ENST00000560542 ATP10AO60312 1499 aa23.93■■□□□ 1.42
IRF9-210ENST00000560542 C9orf84Q5VXU9 1444 aa23.93■■□□□ 1.42
IRF9-210ENST00000560542 PREX1Q8TCU6 1659 aa23.91■■□□□ 1.42
IRF9-210ENST00000560542 CDK13Q14004 1512 aaKnown RBP23.9■■□□□ 1.42
IRF9-210ENST00000560542 PLPPR3Q6T4P5 718 aa23.9■■□□□ 1.42
IRF9-210ENST00000560542 MLECQ14165 292 aa23.88■■□□□ 1.41
IRF9-210ENST00000560542 EFCAB2Q5VUJ9 269 aa23.86■■□□□ 1.41
IRF9-210ENST00000560542 MYO5CQ9NQX4 1742 aa23.86■■□□□ 1.41
IRF9-210ENST00000560542 ZNF518AQ6AHZ1 1483 aa23.85■■□□□ 1.41
IRF9-210ENST00000560542 DMRT2Q9Y5R5 561 aa23.84■■□□□ 1.41
IRF9-210ENST00000560542 FMN1Q68DA7 1419 aa23.84■■□□□ 1.41
IRF9-210ENST00000560542 CDK11AQ9UQ88 783 aaPredicted RBP23.81■■□□□ 1.4
IRF9-210ENST00000560542 KDM5CP41229 1560 aa23.81■■□□□ 1.4
IRF9-210ENST00000560542 UHRF1BP1Q6BDS2 1440 aa23.79■■□□□ 1.4
IRF9-210ENST00000560542 KIF14Q15058 1648 aa23.79■■□□□ 1.4
IRF9-210ENST00000560542 REREQ9P2R6 1566 aa23.78■■□□□ 1.4
IRF9-210ENST00000560542 SETD1BQ9UPS6 1966 aaKnown RBP23.78■■□□□ 1.4
IRF9-210ENST00000560542 STRCQ7RTU9 1775 aa23.75■■□□□ 1.39
IRF9-210ENST00000560542 TROQ12816 1431 aaPredicted RBP23.74■■□□□ 1.39
IRF9-210ENST00000560542 ARHGAP5Q13017 1502 aa23.74■■□□□ 1.39
IRF9-210ENST00000560542 CEBPAP49715 358 aaPredicted RBP23.73■■□□□ 1.39
IRF9-210ENST00000560542 CLIP1P30622 1438 aa23.73■■□□□ 1.39
IRF9-210ENST00000560542 DIP2CQ9Y2E4 1556 aa23.72■■□□□ 1.39
IRF9-210ENST00000560542 PTPRTO14522 1441 aa23.71■■□□□ 1.39
IRF9-210ENST00000560542 MLH3Q9UHC1 1453 aa23.7■■□□□ 1.38
IRF9-210ENST00000560542 AGLP35573 1532 aa23.69■■□□□ 1.38
IRF9-210ENST00000560542 ARHGAP35Q9NRY4 1499 aa23.68■■□□□ 1.38
IRF9-210ENST00000560542 DISP3Q9P2K9 1392 aa23.68■■□□□ 1.38
IRF9-210ENST00000560542 AFAP1Q8N556 730 aa23.68■■□□□ 1.38
IRF9-210ENST00000560542 ATP1B4Q9UN42 357 aaPredicted RBP23.67■■□□□ 1.38
IRF9-210ENST00000560542 C3P01024 1663 aa23.65■■□□□ 1.38
IRF9-210ENST00000560542 ABCA6Q8N139 1617 aa23.65■■□□□ 1.38
IRF9-210ENST00000560542 IQSEC2Q5JU85 1478 aa23.64■■□□□ 1.38
IRF9-210ENST00000560542 SOCS7O14512 581 aa23.63■■□□□ 1.37
IRF9-210ENST00000560542 TRAPPC8Q9Y2L5 1435 aa23.63■■□□□ 1.37
IRF9-210ENST00000560542 CNTLNQ9NXG0 1405 aa23.62■■□□□ 1.37
IRF9-210ENST00000560542 UBTFP17480 764 aaKnown RBP23.62■■□□□ 1.37
IRF9-210ENST00000560542 MYT1LQ9UL68 1186 aa23.62■■□□□ 1.37
IRF9-210ENST00000560542 ABCC1P33527 1531 aa23.62■■□□□ 1.37
IRF9-210ENST00000560542 ESF1Q9H501 851 aaKnown RBP23.61■■□□□ 1.37
IRF9-210ENST00000560542 PREX2Q70Z35 1606 aa23.61■■□□□ 1.37
IRF9-210ENST00000560542 CDC42BPBQ9Y5S2 1711 aa23.61■■□□□ 1.37
IRF9-210ENST00000560542 ILDR2Q71H61 639 aa23.59■■□□□ 1.37
IRF9-210ENST00000560542 LTBP4Q8N2S1 1624 aa23.58■■□□□ 1.36
IRF9-210ENST00000560542 SPATA31D1Q6ZQQ2 1576 aa23.57■■□□□ 1.36
IRF9-210ENST00000560542 NCOA1Q15788 1441 aa23.57■■□□□ 1.36
IRF9-210ENST00000560542 ITSN2Q9NZM3 1697 aa23.57■■□□□ 1.36
IRF9-210ENST00000560542 CCDC18Q5T9S5 1454 aa23.56■■□□□ 1.36
IRF9-210ENST00000560542 LRRIQ1Q96JM4 1722 aa23.56■■□□□ 1.36
IRF9-210ENST00000560542 NPATQ14207 1427 aa23.55■■□□□ 1.36
IRF9-210ENST00000560542 KIDINS220Q9ULH0 1771 aa23.53■■□□□ 1.36
IRF9-210ENST00000560542 MROH2AA6NES4 1674 aa23.52■■□□□ 1.36
IRF9-210ENST00000560542 CASKIN1Q8WXD9 1431 aa23.5■■□□□ 1.35
IRF9-210ENST00000560542 CAMSAP1Q5T5Y3 1602 aa23.46■■□□□ 1.35
IRF9-210ENST00000560542 CDC42BPAQ5VT25 1732 aa23.46■■□□□ 1.35
IRF9-210ENST00000560542 SAMD9LQ8IVG5 1584 aa23.45■■□□□ 1.34
IRF9-210ENST00000560542 ZMYM3Q14202 1370 aa23.42■■□□□ 1.34
IRF9-210ENST00000560542 EHMT2Q96KQ7 1210 aa23.42■■□□□ 1.34
IRF9-210ENST00000560542 PLA2R1Q13018 1463 aa23.42■■□□□ 1.34
IRF9-210ENST00000560542 ZNF142P52746 1687 aaPredicted RBP23.41■■□□□ 1.34
IRF9-210ENST00000560542 FYCO1Q9BQS8 1478 aa23.4■■□□□ 1.34
IRF9-210ENST00000560542 SYCP2Q9BX26 1530 aa23.38■■□□□ 1.33
IRF9-210ENST00000560542 SPAG9O60271 1321 aaKnown RBP23.38■■□□□ 1.33
IRF9-210ENST00000560542 PKD2Q13563 968 aa23.38■■□□□ 1.33
IRF9-210ENST00000560542 PLXNC1O60486 1568 aa23.38■■□□□ 1.33
IRF9-210ENST00000560542 PLEKHH2Q8IVE3 1493 aa23.37■■□□□ 1.33
IRF9-210ENST00000560542 KIAA1107Q9UPP5 1409 aa23.37■■□□□ 1.33
IRF9-210ENST00000560542 ATP7AQ04656 1500 aa23.37■■□□□ 1.33
IRF9-210ENST00000560542 MYO3AQ8NEV4 1616 aa23.37■■□□□ 1.33
IRF9-210ENST00000560542 GPATCH8Q9UKJ3 1502 aaKnown RBP23.35■■□□□ 1.33
IRF9-210ENST00000560542 TCOF1Q13428 1488 aaKnown RBP23.35■■□□□ 1.33
IRF9-210ENST00000560542 INO80Q9ULG1 1556 aaPredicted RBP23.35■■□□□ 1.33
IRF9-210ENST00000560542 CEP170BQ9Y4F5 1589 aaPredicted RBP23.34■■□□□ 1.33
IRF9-210ENST00000560542 SUPT6HQ7KZ85 1726 aaKnown RBP23.33■■□□□ 1.33
IRF9-210ENST00000560542 A2MP01023 1474 aa23.33■■□□□ 1.33
IRF9-210ENST00000560542 CLTCQ00610 1675 aaKnown RBP23.32■■□□□ 1.32
IRF9-210ENST00000560542 PPP6R1Q9UPN7 881 aa23.32■■□□□ 1.32
IRF9-210ENST00000560542 PTPRKQ15262 1439 aa23.32■■□□□ 1.32
IRF9-210ENST00000560542 ZNF335Q9H4Z2 1342 aaPredicted RBP23.32■■□□□ 1.32
IRF9-210ENST00000560542 ZNF777Q9ULD5 760 aaPredicted RBP23.31■■□□□ 1.32
IRF9-210ENST00000560542 NCKAP5LQ9HCH0 1330 aa23.31■■□□□ 1.32
IRF9-210ENST00000560542 UBAP1LF5GYI3 381 aa23.29■■□□□ 1.32
IRF9-210ENST00000560542 HNRNPMP52272 730 aaKnown RBP eCLIP23.28■■□□□ 1.32
IRF9-210ENST00000560542 ADGBQ8N7X0 1667 aa23.25■■□□□ 1.31
IRF9-210ENST00000560542 CFDP1Q9UEE9 299 aaPredicted RBP23.25■■□□□ 1.31
IRF9-210ENST00000560542 CCNB3Q8WWL7 1395 aa23.23■■□□□ 1.31
IRF9-210ENST00000560542 A2ML1A8K2U0 1454 aa23.23■■□□□ 1.31
IRF9-210ENST00000560542 CHIC1Q5VXU3 224 aa23.22■■□□□ 1.31
IRF9-210ENST00000560542 GGT6Q6P531 493 aa23.21■■□□□ 1.31
IRF9-210ENST00000560542 FAM135AQ9P2D6 1515 aa23.19■■□□□ 1.3
IRF9-210ENST00000560542 DNMT1P26358 1616 aaKnown RBP23.19■■□□□ 1.3
IRF9-210ENST00000560542 CPS1P31327 1500 aa23.18■■□□□ 1.3
IRF9-210ENST00000560542 RTEL1-TNFRSF6BF6WH68 1400 aa23.17■■□□□ 1.3
IRF9-210ENST00000560542 MTUS2Q5JR59 1369 aa23.15■■□□□ 1.3
IRF9-210ENST00000560542 POLR1AO95602 1720 aaPredicted RBP23.14■■□□□ 1.3
IRF9-210ENST00000560542 MBD5Q9P267 1494 aa23.13■■□□□ 1.29
IRF9-210ENST00000560542 DHX29Q7Z478 1369 aaKnown RBP23.12■■□□□ 1.29
IRF9-210ENST00000560542 TIAM1Q13009 1591 aa23.11■■□□□ 1.29
IRF9-210ENST00000560542 NEURL4Q96JN8 1562 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms