RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-208ENST00000560311 TIE1P35590 1138 aa11.4□□□□□ -0.58
IRF9-208ENST00000560311 RASEFQ8IZ41 740 aa11.39□□□□□ -0.59
IRF9-208ENST00000560311 SEC24BO95487 1268 aa11.37□□□□□ -0.59
IRF9-208ENST00000560311 ERICH3Q5RHP9 1530 aa11.36□□□□□ -0.59
IRF9-208ENST00000560311 TTLL13PA6NNM8 815 aa11.36□□□□□ -0.59
IRF9-208ENST00000560311 TRIM41Q8WV44 630 aa11.35□□□□□ -0.59
IRF9-208ENST00000560311 GRIN2AQ12879 1464 aa11.34□□□□□ -0.59
IRF9-208ENST00000560311 CDAN1Q8IWY9 1227 aa11.34□□□□□ -0.59
IRF9-208ENST00000560311 CHMP7Q8WUX9 453 aaPredicted RBP11.34□□□□□ -0.59
IRF9-208ENST00000560311 MIER1Q8N108 512 aa11.33□□□□□ -0.6
IRF9-208ENST00000560311 FHAD1B1AJZ9 1412 aa11.32□□□□□ -0.6
IRF9-208ENST00000560311 ARAP1Q96P48 1450 aa11.32□□□□□ -0.6
IRF9-208ENST00000560311 CEP170Q5SW79 1584 aa11.31□□□□□ -0.6
IRF9-208ENST00000560311 TRIM35Q9UPQ4 493 aa11.3□□□□□ -0.6
IRF9-208ENST00000560311 NUP160Q12769 1436 aa11.29□□□□□ -0.6
IRF9-208ENST00000560311 PLEKHG5O94827 1062 aa11.28□□□□□ -0.6
IRF9-208ENST00000560311 KIF27Q86VH2 1401 aa11.26□□□□□ -0.61
IRF9-208ENST00000560311 CUL7Q14999 1698 aa11.26□□□□□ -0.61
IRF9-208ENST00000560311 RUSC2Q8N2Y8 1516 aa11.25□□□□□ -0.61
IRF9-208ENST00000560311 SLAIN1Q8ND83 568 aa11.25□□□□□ -0.61
IRF9-208ENST00000560311 PCDHB13Q9Y5F0 798 aa11.25□□□□□ -0.61
IRF9-208ENST00000560311 IER5LQ5T953 404 aa11.24□□□□□ -0.61
IRF9-208ENST00000560311 SHROOM2Q13796 1616 aa11.24□□□□□ -0.61
IRF9-208ENST00000560311 ST18O60284 1047 aa11.23□□□□□ -0.61
IRF9-208ENST00000560311 ERCC6L2Q5T890 1561 aa11.21□□□□□ -0.61
IRF9-208ENST00000560311 IGF1RP08069 1367 aa11.19□□□□□ -0.62
IRF9-208ENST00000560311 CYB5RLQ6IPT4 315 aa11.19□□□□□ -0.62
IRF9-208ENST00000560311 IFNL1Q8IU54 200 aa11.19□□□□□ -0.62
IRF9-208ENST00000560311 SGIP1Q9BQI5 828 aa11.19□□□□□ -0.62
IRF9-208ENST00000560311 PLCD3Q8N3E9 789 aa11.18□□□□□ -0.62
IRF9-208ENST00000560311 TMEM106CQ9BVX2 250 aa11.17□□□□□ -0.62
IRF9-208ENST00000560311 PLCG2P16885 1265 aa11.15□□□□□ -0.62
IRF9-208ENST00000560311 NUBP1P53384 320 aa11.15□□□□□ -0.62
IRF9-208ENST00000560311 PRG4Q92954 1404 aaPredicted RBP11.14□□□□□ -0.63
IRF9-208ENST00000560311 CARMIL1Q5VZK9 1371 aa11.14□□□□□ -0.63
IRF9-208ENST00000560311 KIAA0586Q9BVV6 1533 aa11.13□□□□□ -0.63
IRF9-208ENST00000560311 IRX5P78411 483 aaPredicted RBP11.1□□□□□ -0.63
IRF9-208ENST00000560311 IQGAP2Q13576 1575 aa11.1□□□□□ -0.63
IRF9-208ENST00000560311 RAPGEF2Q9Y4G8 1499 aa11.09□□□□□ -0.63
IRF9-208ENST00000560311 MMRN1Q13201 1228 aa11.09□□□□□ -0.63
IRF9-208ENST00000560311 SPNS2Q8IVW8 549 aa11.07□□□□□ -0.64
IRF9-208ENST00000560311 JPH4Q96JJ6 628 aa11.06□□□□□ -0.64
IRF9-208ENST00000560311 FAM212AQ96EL1 285 aa11.05□□□□□ -0.64
IRF9-208ENST00000560311 ZBTB47Q9UFB7 747 aaPredicted RBP11.05□□□□□ -0.64
IRF9-208ENST00000560311 MARVELD3Q96A59 401 aa11.04□□□□□ -0.64
IRF9-208ENST00000560311 PRXQ9BXM0 1461 aa11.04□□□□□ -0.64
IRF9-208ENST00000560311 ADCY10Q96PN6 1610 aa11.03□□□□□ -0.64
IRF9-208ENST00000560311 CTTNBP2Q8WZ74 1663 aa11.03□□□□□ -0.64
IRF9-208ENST00000560311 OCEL1Q9H607 264 aa11.02□□□□□ -0.65
IRF9-208ENST00000560311 UGGT2Q9NYU1 1516 aa11.02□□□□□ -0.65
IRF9-208ENST00000560311 KIAA0556O60303 1618 aa11.02□□□□□ -0.65
IRF9-208ENST00000560311 DISP1Q96F81 1524 aa11.01□□□□□ -0.65
IRF9-208ENST00000560311 CARMIL2Q6F5E8 1435 aa11.01□□□□□ -0.65
IRF9-208ENST00000560311 TMEM121BQ9BXQ6 578 aaPredicted RBP11□□□□□ -0.65
IRF9-208ENST00000560311 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.99□□□□□ -0.65
IRF9-208ENST00000560311 EEA1Q15075 1411 aa10.99□□□□□ -0.65
IRF9-208ENST00000560311 TNIKQ9UKE5 1360 aa10.98□□□□□ -0.65
IRF9-208ENST00000560311 MAPKBP1O60336 1514 aa10.98□□□□□ -0.65
IRF9-208ENST00000560311 SNPHO15079 494 aa10.97□□□□□ -0.65
IRF9-208ENST00000560311 PYGBP11216 843 aa10.97□□□□□ -0.65
IRF9-208ENST00000560311 PTPRGP23470 1445 aa10.96□□□□□ -0.65
IRF9-208ENST00000560311 PCDHB8Q9UN66 801 aa10.96□□□□□ -0.65
IRF9-208ENST00000560311 ABCC2Q92887 1545 aa10.94□□□□□ -0.66
IRF9-208ENST00000560311 DCAF8Q5TAQ9 597 aa10.94□□□□□ -0.66
IRF9-208ENST00000560311 DIP2BQ9P265 1576 aa10.94□□□□□ -0.66
IRF9-208ENST00000560311 GOLGA3Q08378 1498 aa10.93□□□□□ -0.66
IRF9-208ENST00000560311 UHRF1BP1LA0JNW5 1464 aa10.93□□□□□ -0.66
IRF9-208ENST00000560311 KIF21BO75037 1637 aa10.92□□□□□ -0.66
IRF9-208ENST00000560311 KIF13AQ9H1H9 1805 aa10.91□□□□□ -0.66
IRF9-208ENST00000560311 TTBK1Q5TCY1 1321 aaPredicted RBP10.91□□□□□ -0.66
IRF9-208ENST00000560311 ABCC10Q5T3U5 1492 aa10.91□□□□□ -0.66
IRF9-208ENST00000560311 UACAQ9BZF9 1416 aa10.91□□□□□ -0.66
IRF9-208ENST00000560311 SAMD9Q5K651 1589 aa10.9□□□□□ -0.67
IRF9-208ENST00000560311 EMP3P54852 163 aa10.88□□□□□ -0.67
IRF9-208ENST00000560311 ZCCHC11Q5TAX3 1644 aaKnown RBP10.87□□□□□ -0.67
IRF9-208ENST00000560311 PLB1Q6P1J6 1458 aa10.87□□□□□ -0.67
IRF9-208ENST00000560311 ABCA8O94911 1581 aa10.87□□□□□ -0.67
IRF9-208ENST00000560311 PDCD7Q8N8D1 485 aaKnown RBP10.87□□□□□ -0.67
IRF9-208ENST00000560311 KDM5BQ9UGL1 1544 aa10.87□□□□□ -0.67
IRF9-208ENST00000560311 POTEB3A0JP26 581 aa10.86□□□□□ -0.67
IRF9-208ENST00000560311 POTEBQ6S5H4 581 aa10.86□□□□□ -0.67
IRF9-208ENST00000560311 FAM9AQ8IZU1 332 aaPredicted RBP10.86□□□□□ -0.67
IRF9-208ENST00000560311 ASXL2Q76L83 1435 aa10.85□□□□□ -0.67
IRF9-208ENST00000560311 C3orf67Q6ZVT6 689 aa10.85□□□□□ -0.67
IRF9-208ENST00000560311 EFCAB5A4FU69 1503 aa10.84□□□□□ -0.67
IRF9-208ENST00000560311 KRTAP3-3Q9BYR6 98 aa10.83□□□□□ -0.68
IRF9-208ENST00000560311 KRTAP3-2Q9BYR7 98 aa10.83□□□□□ -0.68
IRF9-208ENST00000560311 GLI2P10070 1586 aa10.82□□□□□ -0.68
IRF9-208ENST00000560311 FAM205CA6NFA0 338 aa10.82□□□□□ -0.68
IRF9-208ENST00000560311 FAM69CQ0P6D2 419 aa10.82□□□□□ -0.68
IRF9-208ENST00000560311 HS3ST6Q96QI5 342 aa10.82□□□□□ -0.68
IRF9-208ENST00000560311 WDR7Q9Y4E6 1490 aa10.81□□□□□ -0.68
IRF9-208ENST00000560311 EPRSP07814 1512 aaKnown RBP10.81□□□□□ -0.68
IRF9-208ENST00000560311 FHOD3Q2V2M9 1422 aa10.81□□□□□ -0.68
IRF9-208ENST00000560311 RAPGEF6Q8TEU7 1601 aa10.8□□□□□ -0.68
IRF9-208ENST00000560311 MKRN3Q13064 507 aaKnown RBP10.79□□□□□ -0.68
IRF9-208ENST00000560311 FKBP8Q14318 412 aa10.79□□□□□ -0.68
IRF9-208ENST00000560311 L3MBTL3Q96JM7 780 aaPredicted RBP10.79□□□□□ -0.68
IRF9-208ENST00000560311 MAP3K4Q9Y6R4 1608 aa10.78□□□□□ -0.68
IRF9-208ENST00000560311 GOLGA2Q08379 1002 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms