RNA–Protein interactions for RNA: ENST00000560220.5

KNSTRN-209, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 5

Gene KNSTRN, Length 903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-209ENST00000560220 NCKAP5LQ9HCH0 1330 aa17.82■□□□□ 0.44
KNSTRN-209ENST00000560220 UGGT2Q9NYU1 1516 aa17.79■□□□□ 0.44
KNSTRN-209ENST00000560220 SETD1AO15047 1707 aaKnown RBP17.79■□□□□ 0.44
KNSTRN-209ENST00000560220 CAMSAP1Q5T5Y3 1602 aa17.79■□□□□ 0.44
KNSTRN-209ENST00000560220 CARMIL1Q5VZK9 1371 aa17.78■□□□□ 0.44
KNSTRN-209ENST00000560220 UPF1Q92900 1129 aaKnown RBP eCLIP17.77■□□□□ 0.44
KNSTRN-209ENST00000560220 ABCA8O94911 1581 aa17.77■□□□□ 0.44
KNSTRN-209ENST00000560220 MAGI2Q86UL8 1455 aa17.76■□□□□ 0.43
KNSTRN-209ENST00000560220 ZMYM4Q5VZL5 1548 aa17.76■□□□□ 0.43
KNSTRN-209ENST00000560220 ARID3CA6NKF2 412 aa17.74■□□□□ 0.43
KNSTRN-209ENST00000560220 TRAPPC8Q9Y2L5 1435 aa17.73■□□□□ 0.43
KNSTRN-209ENST00000560220 KIF27Q86VH2 1401 aa17.72■□□□□ 0.43
KNSTRN-209ENST00000560220 PKD2Q13563 968 aa17.71■□□□□ 0.43
KNSTRN-209ENST00000560220 PTPRKQ15262 1439 aa17.71■□□□□ 0.43
KNSTRN-209ENST00000560220 C3P01024 1663 aa17.71■□□□□ 0.42
KNSTRN-209ENST00000560220 SRCAPQ6ZRS2 3230 aa17.7■□□□□ 0.42
KNSTRN-209ENST00000560220 PPP6R1Q9UPN7 881 aa17.69■□□□□ 0.42
KNSTRN-209ENST00000560220 ATP10AO60312 1499 aa17.69■□□□□ 0.42
KNSTRN-209ENST00000560220 C9orf84Q5VXU9 1444 aa17.67■□□□□ 0.42
KNSTRN-209ENST00000560220 HECW1Q76N89 1606 aa17.67■□□□□ 0.42
KNSTRN-209ENST00000560220 ESF1Q9H501 851 aaKnown RBP17.66■□□□□ 0.42
KNSTRN-209ENST00000560220 ATP10BO94823 1461 aa17.65■□□□□ 0.42
KNSTRN-209ENST00000560220 CPS1P31327 1500 aa17.65■□□□□ 0.42
KNSTRN-209ENST00000560220 CFAP74Q9C0B2 1584 aa17.62■□□□□ 0.41
KNSTRN-209ENST00000560220 ALKQ9UM73 1620 aa17.61■□□□□ 0.41
KNSTRN-209ENST00000560220 FAM9AQ8IZU1 332 aaPredicted RBP17.59■□□□□ 0.41
KNSTRN-209ENST00000560220 PLA2R1Q13018 1463 aa17.57■□□□□ 0.4
KNSTRN-209ENST00000560220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.56■□□□□ 0.4
KNSTRN-209ENST00000560220 HNRNPUL2Q1KMD3 747 aaKnown RBP17.56■□□□□ 0.4
KNSTRN-209ENST00000560220 GOLGA3Q08378 1498 aa17.56■□□□□ 0.4
KNSTRN-209ENST00000560220 TCOF1Q13428 1488 aaKnown RBP17.56■□□□□ 0.4
KNSTRN-209ENST00000560220 SHANK2Q9UPX8 1470 aa17.56■□□□□ 0.4
KNSTRN-209ENST00000560220 IFFO2Q5TF58 517 aa17.55■□□□□ 0.4
KNSTRN-209ENST00000560220 RAPGEF2Q9Y4G8 1499 aa17.55■□□□□ 0.4
KNSTRN-209ENST00000560220 SUPT6HQ7KZ85 1726 aaKnown RBP17.52■□□□□ 0.39
KNSTRN-209ENST00000560220 SCAPERQ9BY12 1400 aa17.5■□□□□ 0.39
KNSTRN-209ENST00000560220 NPATQ14207 1427 aa17.49■□□□□ 0.39
KNSTRN-209ENST00000560220 TRIM52Q96A61 297 aa17.48■□□□□ 0.39
KNSTRN-209ENST00000560220 MYT1LQ9UL68 1186 aa17.45■□□□□ 0.38
KNSTRN-209ENST00000560220 CNTLNQ9NXG0 1405 aa17.45■□□□□ 0.38
KNSTRN-209ENST00000560220 ZNF142P52746 1687 aaPredicted RBP17.42■□□□□ 0.38
KNSTRN-209ENST00000560220 AGLP35573 1532 aa17.41■□□□□ 0.38
KNSTRN-209ENST00000560220 FOXD1Q16676 465 aa17.4■□□□□ 0.38
KNSTRN-209ENST00000560220 CEP170BQ9Y4F5 1589 aaPredicted RBP17.4■□□□□ 0.38
KNSTRN-209ENST00000560220 RBM33Q96EV2 1170 aaKnown RBP17.39■□□□□ 0.37
KNSTRN-209ENST00000560220 ZRANB1Q9UGI0 708 aa17.39■□□□□ 0.37
KNSTRN-209ENST00000560220 PLEKHD1A6NEE1 506 aa17.38■□□□□ 0.37
KNSTRN-209ENST00000560220 MYO3AQ8NEV4 1616 aa17.38■□□□□ 0.37
KNSTRN-209ENST00000560220 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.37■□□□□ 0.377e-7■■□□□ 13.6
KNSTRN-209ENST00000560220 ZMYM3Q14202 1370 aa17.37■□□□□ 0.37
KNSTRN-209ENST00000560220 RNF17Q9BXT8 1623 aaKnown RBP17.36■□□□□ 0.37
KNSTRN-209ENST00000560220 LRRC7Q96NW7 1537 aa17.35■□□□□ 0.37
KNSTRN-209ENST00000560220 VWDEQ8N2E2 1590 aa17.35■□□□□ 0.37
KNSTRN-209ENST00000560220 REREQ9P2R6 1566 aa17.35■□□□□ 0.37
KNSTRN-209ENST00000560220 P3H3Q8IVL6 736 aa17.33■□□□□ 0.36
KNSTRN-209ENST00000560220 MROH2AA6NES4 1674 aa17.32■□□□□ 0.36
KNSTRN-209ENST00000560220 CTTNBP2Q8WZ74 1663 aa17.32■□□□□ 0.36
KNSTRN-209ENST00000560220 DIP2CQ9Y2E4 1556 aa17.32■□□□□ 0.36
KNSTRN-209ENST00000560220 POLR1AO95602 1720 aaPredicted RBP17.32■□□□□ 0.36
KNSTRN-209ENST00000560220 ZNF772Q68DY9 489 aaPredicted RBP17.31■□□□□ 0.36
KNSTRN-209ENST00000560220 AFAP1Q8N556 730 aa17.3■□□□□ 0.36
KNSTRN-209ENST00000560220 SETBP1Q9Y6X0 1596 aa17.3■□□□□ 0.36
KNSTRN-209ENST00000560220 NEURL4Q96JN8 1562 aa17.29■□□□□ 0.36
KNSTRN-209ENST00000560220 RXRBP28702 533 aa17.29■□□□□ 0.36
KNSTRN-209ENST00000560220 ZNF518AQ6AHZ1 1483 aa17.29■□□□□ 0.36
KNSTRN-209ENST00000560220 RAPGEF6Q8TEU7 1601 aa17.29■□□□□ 0.36
KNSTRN-209ENST00000560220 PLCH2O75038 1416 aa17.26■□□□□ 0.35
KNSTRN-209ENST00000560220 FAM135BQ49AJ0 1406 aa17.26■□□□□ 0.35
KNSTRN-209ENST00000560220 EFCAB2Q5VUJ9 269 aa17.25■□□□□ 0.35
KNSTRN-209ENST00000560220 DNMT1P26358 1616 aaKnown RBP17.25■□□□□ 0.35
KNSTRN-209ENST00000560220 ABCA6Q8N139 1617 aa17.23■□□□□ 0.35
KNSTRN-209ENST00000560220 ANKLE2Q86XL3 938 aa17.23■□□□□ 0.35
KNSTRN-209ENST00000560220 A2ML1A8K2U0 1454 aa17.23■□□□□ 0.35
KNSTRN-209ENST00000560220 KDM5CP41229 1560 aa17.23■□□□□ 0.35
KNSTRN-209ENST00000560220 SYNMO15061 1565 aa17.22■□□□□ 0.35
KNSTRN-209ENST00000560220 CDK12Q9NYV4 1490 aaPredicted RBP17.21■□□□□ 0.35
KNSTRN-209ENST00000560220 MEX3CQ5U5Q3 659 aaKnown RBP17.21■□□□□ 0.35
KNSTRN-209ENST00000560220 CHIC1Q5VXU3 224 aa17.2■□□□□ 0.34
KNSTRN-209ENST00000560220 STRCP1A6NGW2 1772 aa17.2■□□□□ 0.34
KNSTRN-209ENST00000560220 NUP153P49790 1475 aaKnown RBP17.19■□□□□ 0.34
KNSTRN-209ENST00000560220 NPHP4O75161 1426 aaPredicted RBP17.18■□□□□ 0.34
KNSTRN-209ENST00000560220 MLH3Q9UHC1 1453 aa17.17■□□□□ 0.34
KNSTRN-209ENST00000560220 CLTCQ00610 1675 aaKnown RBP17.16■□□□□ 0.34
KNSTRN-209ENST00000560220 JCADQ9P266 1359 aa17.15■□□□□ 0.34
KNSTRN-209ENST00000560220 NUTM2BA6NNL0 878 aaPredicted RBP17.15■□□□□ 0.34
KNSTRN-209ENST00000560220 NUTM2EB1AL46 878 aaPredicted RBP17.15■□□□□ 0.34
KNSTRN-209ENST00000560220 NUTM2DQ5VT03 806 aaPredicted RBP17.15■□□□□ 0.34
KNSTRN-209ENST00000560220 NUTM2AQ8IVF1 878 aaPredicted RBP17.15■□□□□ 0.34
KNSTRN-209ENST00000560220 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.15■□□□□ 0.34
KNSTRN-209ENST00000560220 CDK13Q14004 1512 aaKnown RBP17.13■□□□□ 0.33
KNSTRN-209ENST00000560220 MED14O60244 1454 aa17.12■□□□□ 0.33
KNSTRN-209ENST00000560220 ROBO1Q9Y6N7 1651 aa17.11■□□□□ 0.33
KNSTRN-209ENST00000560220 YY1P25490 414 aa17.1■□□□□ 0.33
KNSTRN-209ENST00000560220 MYO5CQ9NQX4 1742 aa17.08■□□□□ 0.32
KNSTRN-209ENST00000560220 IQGAP1P46940 1657 aa17.08■□□□□ 0.32
KNSTRN-209ENST00000560220 THEMISQ8N1K5 641 aaPredicted RBP17.08■□□□□ 0.32
KNSTRN-209ENST00000560220 DEPDC5O75140 1603 aa17.07■□□□□ 0.32
KNSTRN-209ENST00000560220 LRP6O75581 1613 aa17.07■□□□□ 0.32
KNSTRN-209ENST00000560220 SPATA31A6Q5VVP1 1343 aa17.06■□□□□ 0.32
KNSTRN-209ENST00000560220 ABCC1P33527 1531 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms