RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 PLCH2O75038 1416 aa17.71■□□□□ 0.42
TM2D3-208ENST00000559891 MYO5CQ9NQX4 1742 aa17.7■□□□□ 0.42
TM2D3-208ENST00000559891 PREX2Q70Z35 1606 aa17.7■□□□□ 0.42
TM2D3-208ENST00000559891 TSPOAP1O95153 1857 aa17.7■□□□□ 0.42
TM2D3-208ENST00000559891 RRBP1Q9P2E9 1410 aaKnown RBP17.69■□□□□ 0.42
TM2D3-208ENST00000559891 ARHGAP5Q13017 1502 aa17.69■□□□□ 0.42
TM2D3-208ENST00000559891 GLI2P10070 1586 aa17.68■□□□□ 0.42
TM2D3-208ENST00000559891 MAP3K4Q9Y6R4 1608 aa17.68■□□□□ 0.42
TM2D3-208ENST00000559891 ITGAEP38570 1179 aa17.68■□□□□ 0.42
TM2D3-208ENST00000559891 PTPN23Q9H3S7 1636 aa17.67■□□□□ 0.42
TM2D3-208ENST00000559891 ITSN2Q9NZM3 1697 aa17.67■□□□□ 0.42
TM2D3-208ENST00000559891 TRIM26Q12899 539 aaPredicted RBP17.66■□□□□ 0.42
TM2D3-208ENST00000559891 SAMD9LQ8IVG5 1584 aa17.65■□□□□ 0.42
TM2D3-208ENST00000559891 HNRNPMP52272 730 aaKnown RBP eCLIP17.65■□□□□ 0.42
TM2D3-208ENST00000559891 MIA2Q96PC5 1412 aa17.65■□□□□ 0.42
TM2D3-208ENST00000559891 FANCAO15360 1455 aa17.64■□□□□ 0.41
TM2D3-208ENST00000559891 CAMSAP2Q08AD1 1489 aa17.64■□□□□ 0.41
TM2D3-208ENST00000559891 PPRC1Q5VV67 1664 aaKnown RBP17.64■□□□□ 0.41
TM2D3-208ENST00000559891 EFCAB2Q5VUJ9 269 aa17.63■□□□□ 0.41
TM2D3-208ENST00000559891 ARHGEF12Q9NZN5 1544 aa17.63■□□□□ 0.41
TM2D3-208ENST00000559891 TCOF1Q13428 1488 aaKnown RBP17.61■□□□□ 0.41
TM2D3-208ENST00000559891 PHF23Q9BUL5 403 aaPredicted RBP17.6■□□□□ 0.41
TM2D3-208ENST00000559891 PTPRKQ15262 1439 aa17.6■□□□□ 0.41
TM2D3-208ENST00000559891 SYCP2Q9BX26 1530 aa17.59■□□□□ 0.41
TM2D3-208ENST00000559891 AKNAQ7Z591 1439 aa17.58■□□□□ 0.41
TM2D3-208ENST00000559891 ARAP3Q8WWN8 1544 aa17.58■□□□□ 0.4
TM2D3-208ENST00000559891 CHIC2Q9UKJ5 165 aa17.57■□□□□ 0.4
TM2D3-208ENST00000559891 MBD5Q9P267 1494 aa17.57■□□□□ 0.4
TM2D3-208ENST00000559891 AFAP1Q8N556 730 aa17.56■□□□□ 0.4
TM2D3-208ENST00000559891 TRAPPC8Q9Y2L5 1435 aa17.56■□□□□ 0.4
TM2D3-208ENST00000559891 ADGRL1O94910 1474 aa17.56■□□□□ 0.4
TM2D3-208ENST00000559891 SCAPERQ9BY12 1400 aa17.55■□□□□ 0.4
TM2D3-208ENST00000559891 ABCC1P33527 1531 aa17.55■□□□□ 0.4
TM2D3-208ENST00000559891 ABCC5O15440 1437 aa17.55■□□□□ 0.4
TM2D3-208ENST00000559891 RAPGEF3O95398 923 aa17.54■□□□□ 0.4
TM2D3-208ENST00000559891 COL17A1Q9UMD9 1497 aaPredicted RBP17.53■□□□□ 0.4
TM2D3-208ENST00000559891 DAPK1P53355 1430 aa17.53■□□□□ 0.4
TM2D3-208ENST00000559891 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.53■□□□□ 0.4
TM2D3-208ENST00000559891 DNMT1P26358 1616 aaKnown RBP17.51■□□□□ 0.39
TM2D3-208ENST00000559891 NEO1Q92859 1461 aa17.51■□□□□ 0.39
TM2D3-208ENST00000559891 KIAA1107Q9UPP5 1409 aa17.51■□□□□ 0.39
TM2D3-208ENST00000559891 TEX14Q8IWB6 1497 aa17.48■□□□□ 0.39
TM2D3-208ENST00000559891 RRP7BPQ9NSQ0 103 aa17.48■□□□□ 0.39
TM2D3-208ENST00000559891 PLEKHH2Q8IVE3 1493 aa17.47■□□□□ 0.39
TM2D3-208ENST00000559891 CFAP74Q9C0B2 1584 aa17.47■□□□□ 0.39
TM2D3-208ENST00000559891 CCDC141Q6ZP82 1450 aa17.47■□□□□ 0.39
TM2D3-208ENST00000559891 ARHGEF5Q12774 1597 aa17.47■□□□□ 0.39
TM2D3-208ENST00000559891 CROCC2H7BZ55 1655 aa17.45■□□□□ 0.38
TM2D3-208ENST00000559891 POGZQ7Z3K3 1410 aa17.45■□□□□ 0.38
TM2D3-208ENST00000559891 DENND4BO75064 1496 aaPredicted RBP17.45■□□□□ 0.38
TM2D3-208ENST00000559891 FRMPD1Q5SYB0 1578 aa17.44■□□□□ 0.38
TM2D3-208ENST00000559891 C9orf84Q5VXU9 1444 aa17.44■□□□□ 0.38
TM2D3-208ENST00000559891 TSPY4P0CV99 314 aa17.44■□□□□ 0.38
TM2D3-208ENST00000559891 TSPY10P0CW01 314 aa17.44■□□□□ 0.38
TM2D3-208ENST00000559891 RICTORQ6R327 1708 aa17.42■□□□□ 0.38
TM2D3-208ENST00000559891 MYT1LQ9UL68 1186 aa17.42■□□□□ 0.38
TM2D3-208ENST00000559891 SPAG9O60271 1321 aaKnown RBP17.41■□□□□ 0.38
TM2D3-208ENST00000559891 RSPH4AQ5TD94 716 aa17.41■□□□□ 0.38
TM2D3-208ENST00000559891 ZNF518AQ6AHZ1 1483 aa17.41■□□□□ 0.38
TM2D3-208ENST00000559891 NCOA1Q15788 1441 aa17.39■□□□□ 0.38
TM2D3-208ENST00000559891 KDM5CP41229 1560 aa17.39■□□□□ 0.37
TM2D3-208ENST00000559891 YEATS2Q9ULM3 1422 aa17.38■□□□□ 0.37
TM2D3-208ENST00000559891 KIDINS220Q9ULH0 1771 aa17.38■□□□□ 0.37
TM2D3-208ENST00000559891 ZFYVE16Q7Z3T8 1539 aa17.38■□□□□ 0.37
TM2D3-208ENST00000559891 KDM6BO15054 1643 aa17.38■□□□□ 0.37
TM2D3-208ENST00000559891 SHANK2Q9UPX8 1470 aa17.37■□□□□ 0.37
TM2D3-208ENST00000559891 NAIPQ13075 1403 aa17.37■□□□□ 0.37
TM2D3-208ENST00000559891 INO80Q9ULG1 1556 aaPredicted RBP17.36■□□□□ 0.37
TM2D3-208ENST00000559891 ATP7AQ04656 1500 aa17.36■□□□□ 0.37
TM2D3-208ENST00000559891 MAST1Q9Y2H9 1570 aa17.35■□□□□ 0.37
TM2D3-208ENST00000559891 ADGRL2O95490 1459 aa17.35■□□□□ 0.37
TM2D3-208ENST00000559891 ANKRD30AQ9BXX3 1397 aa17.35■□□□□ 0.37
TM2D3-208ENST00000559891 ADGBQ8N7X0 1667 aa17.35■□□□□ 0.37
TM2D3-208ENST00000559891 KIF15Q9NS87 1388 aa17.34■□□□□ 0.37
TM2D3-208ENST00000559891 HFM1A2PYH4 1435 aa17.34■□□□□ 0.37
TM2D3-208ENST00000559891 ZEB1P37275 1124 aaPredicted RBP17.34■□□□□ 0.37
TM2D3-208ENST00000559891 ROCK1Q13464 1354 aa17.34■□□□□ 0.37
TM2D3-208ENST00000559891 HECW2Q9P2P5 1572 aa17.33■□□□□ 0.36
TM2D3-208ENST00000559891 MLH3Q9UHC1 1453 aa17.33■□□□□ 0.36
TM2D3-208ENST00000559891 ABCA6Q8N139 1617 aa17.32■□□□□ 0.36
TM2D3-208ENST00000559891 RAB3GAP2Q9H2M9 1393 aa17.32■□□□□ 0.36
TM2D3-208ENST00000559891 RTEL1-TNFRSF6BF6WH68 1400 aa17.32■□□□□ 0.36
TM2D3-208ENST00000559891 SETD5Q9C0A6 1442 aa17.31■□□□□ 0.36
TM2D3-208ENST00000559891 ZMYM4Q5VZL5 1548 aa17.3■□□□□ 0.36
TM2D3-208ENST00000559891 PLXNC1O60486 1568 aa17.29■□□□□ 0.36
TM2D3-208ENST00000559891 DIP2CQ9Y2E4 1556 aa17.29■□□□□ 0.36
TM2D3-208ENST00000559891 GCC2Q8IWJ2 1684 aa17.28■□□□□ 0.36
TM2D3-208ENST00000559891 ANKRD50Q9ULJ7 1429 aa17.28■□□□□ 0.36
TM2D3-208ENST00000559891 SIGLEC1Q9BZZ2 1709 aa17.26■□□□□ 0.35
TM2D3-208ENST00000559891 A2MP01023 1474 aa17.24■□□□□ 0.35
TM2D3-208ENST00000559891 DUOX2Q9NRD8 1548 aa17.24■□□□□ 0.35
TM2D3-208ENST00000559891 DHX29Q7Z478 1369 aaKnown RBP17.24■□□□□ 0.35
TM2D3-208ENST00000559891 KIF3BO15066 747 aa17.23■□□□□ 0.35
TM2D3-208ENST00000559891 MAGI2Q86UL8 1455 aa17.22■□□□□ 0.35
TM2D3-208ENST00000559891 ATP10AO60312 1499 aa17.21■□□□□ 0.35
TM2D3-208ENST00000559891 TRIM52Q96A61 297 aa17.21■□□□□ 0.35
TM2D3-208ENST00000559891 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.21■□□□□ 0.35
TM2D3-208ENST00000559891 ARHGEF40Q8TER5 1519 aa17.21■□□□□ 0.34
TM2D3-208ENST00000559891 ERBINQ96RT1 1412 aa17.18■□□□□ 0.34
TM2D3-208ENST00000559891 GGT6Q6P531 493 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 545.9 ms