RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 HSPA5P11021 654 aaKnown RBP14.15□□□□□ -0.14
LRRC28-216ENST00000559819 CEP170Q5SW79 1584 aa14.15□□□□□ -0.14
LRRC28-216ENST00000559819 PLB1Q6P1J6 1458 aa14.14□□□□□ -0.15
LRRC28-216ENST00000559819 L3MBTL2Q969R5 705 aa14.14□□□□□ -0.15
LRRC28-216ENST00000559819 DNMT1P26358 1616 aaKnown RBP14.13□□□□□ -0.15
LRRC28-216ENST00000559819 CDK11AQ9UQ88 783 aaPredicted RBP14.12□□□□□ -0.15
LRRC28-216ENST00000559819 WASHC2AQ641Q2 1341 aa14.11□□□□□ -0.15
LRRC28-216ENST00000559819 ROCK1Q13464 1354 aa14.11□□□□□ -0.15
LRRC28-216ENST00000559819 BCANQ96GW7 911 aa14.11□□□□□ -0.15
LRRC28-216ENST00000559819 MAGI1Q96QZ7 1491 aaPredicted RBP14.11□□□□□ -0.15
LRRC28-216ENST00000559819 SYNJ2O15056 1496 aa14.11□□□□□ -0.15
LRRC28-216ENST00000559819 TROQ12816 1431 aaPredicted RBP14.1□□□□□ -0.15
LRRC28-216ENST00000559819 ZNF777Q9ULD5 760 aaPredicted RBP14.1□□□□□ -0.15
LRRC28-216ENST00000559819 CFDP1Q9UEE9 299 aaPredicted RBP14.09□□□□□ -0.15
LRRC28-216ENST00000559819 ANKRD30BQ9BXX2 1392 aa14.09□□□□□ -0.15
LRRC28-216ENST00000559819 CAMSAP2Q08AD1 1489 aa14.09□□□□□ -0.15
LRRC28-216ENST00000559819 KIF14Q15058 1648 aa14.08□□□□□ -0.16
LRRC28-216ENST00000559819 SLC4A1APQ9BWU0 796 aaKnown RBP14.08□□□□□ -0.16
LRRC28-216ENST00000559819 EIF4G2P78344 907 aaKnown RBP eCLIP14.07□□□□□ -0.16
LRRC28-216ENST00000559819 FKBP8Q14318 412 aa14.07□□□□□ -0.16
LRRC28-216ENST00000559819 NBPF8Q3BBV2 869 aa14.07□□□□□ -0.16
LRRC28-216ENST00000559819 JPH4Q96JJ6 628 aa14.07□□□□□ -0.16
LRRC28-216ENST00000559819 GPATCH8Q9UKJ3 1502 aaKnown RBP14.06□□□□□ -0.16
LRRC28-216ENST00000559819 C11orf95C9JLR9 678 aaPredicted RBP14.06□□□□□ -0.16
LRRC28-216ENST00000559819 RPRD2Q5VT52 1461 aaKnown RBP14.05□□□□□ -0.16
LRRC28-216ENST00000559819 NUP160Q12769 1436 aa14.04□□□□□ -0.16
LRRC28-216ENST00000559819 TEX14Q8IWB6 1497 aa14.04□□□□□ -0.16
LRRC28-216ENST00000559819 PZPP20742 1482 aa14.03□□□□□ -0.16
LRRC28-216ENST00000559819 CARMIL2Q6F5E8 1435 aa14.03□□□□□ -0.16
LRRC28-216ENST00000559819 NCOA1Q15788 1441 aa14.02□□□□□ -0.17
LRRC28-216ENST00000559819 ITSN2Q9NZM3 1697 aa14.01□□□□□ -0.17
LRRC28-216ENST00000559819 ADCY10Q96PN6 1610 aa14.01□□□□□ -0.17
LRRC28-216ENST00000559819 TSHZ2Q9NRE2 1034 aa14□□□□□ -0.17
LRRC28-216ENST00000559819 CNTLNQ9NXG0 1405 aa14□□□□□ -0.17
LRRC28-216ENST00000559819 CCDC7Q96M83 1385 aa13.99□□□□□ -0.17
LRRC28-216ENST00000559819 CCDC184Q52MB2 194 aa13.99□□□□□ -0.17
LRRC28-216ENST00000559819 ADGBQ8N7X0 1667 aa13.99□□□□□ -0.17
LRRC28-216ENST00000559819 HNRNPUQ00839 825 aaKnown RBP eCLIP13.99□□□□□ -0.17
LRRC28-216ENST00000559819 PLEKHD1A6NEE1 506 aa13.98□□□□□ -0.17
LRRC28-216ENST00000559819 ATP10BO94823 1461 aa13.97□□□□□ -0.17
LRRC28-216ENST00000559819 ABCA8O94911 1581 aa13.97□□□□□ -0.17
LRRC28-216ENST00000559819 ADGRL2O95490 1459 aa13.97□□□□□ -0.17
LRRC28-216ENST00000559819 CROCC2H7BZ55 1655 aa13.97□□□□□ -0.17
LRRC28-216ENST00000559819 NEFLP07196 543 aa13.96□□□□□ -0.17
LRRC28-216ENST00000559819 PKD2Q13563 968 aa13.96□□□□□ -0.17
LRRC28-216ENST00000559819 ANKRD30AQ9BXX3 1397 aa13.96□□□□□ -0.18
LRRC28-216ENST00000559819 ZNF326Q5BKZ1 582 aaKnown RBP13.95□□□□□ -0.18
LRRC28-216ENST00000559819 ABCC10Q5T3U5 1492 aa13.95□□□□□ -0.18
LRRC28-216ENST00000559819 KIAA1107Q9UPP5 1409 aa13.95□□□□□ -0.18
LRRC28-216ENST00000559819 KIF7Q2M1P5 1343 aa13.94□□□□□ -0.18
LRRC28-216ENST00000559819 SPATA31E1Q6ZUB1 1445 aa13.94□□□□□ -0.18
LRRC28-216ENST00000559819 CDC42BPAQ5VT25 1732 aa13.94□□□□□ -0.18
LRRC28-216ENST00000559819 ANKRD50Q9ULJ7 1429 aa13.94□□□□□ -0.18
LRRC28-216ENST00000559819 PRKRIP1Q9H875 184 aaPredicted RBP13.92□□□□□ -0.18
LRRC28-216ENST00000559819 C9orf84Q5VXU9 1444 aa13.92□□□□□ -0.18
LRRC28-216ENST00000559819 HNRNPMP52272 730 aaKnown RBP eCLIP13.92□□□□□ -0.18
LRRC28-216ENST00000559819 MBD5Q9P267 1494 aa13.91□□□□□ -0.18
LRRC28-216ENST00000559819 NUP155O75694 1391 aa13.9□□□□□ -0.18
LRRC28-216ENST00000559819 CNGB1Q14028 1251 aaPredicted RBP13.89□□□□□ -0.19
LRRC28-216ENST00000559819 FAM9BQ8IZU0 186 aa13.89□□□□□ -0.19
LRRC28-216ENST00000559819 IRX6P78412 446 aaPredicted RBP13.89□□□□□ -0.19
LRRC28-216ENST00000559819 POLR3GLQ9BT43 218 aa13.89□□□□□ -0.19
LRRC28-216ENST00000559819 PTPRGP23470 1445 aa13.89□□□□□ -0.19
LRRC28-216ENST00000559819 MRS2Q9HD23 443 aa13.88□□□□□ -0.19
LRRC28-216ENST00000559819 TSPY4P0CV99 314 aa13.87□□□□□ -0.19
LRRC28-216ENST00000559819 TSPY10P0CW01 314 aa13.87□□□□□ -0.19
LRRC28-216ENST00000559819 SHANK2Q9UPX8 1470 aa13.87□□□□□ -0.19
LRRC28-216ENST00000559819 USP47Q96K76 1375 aa13.87□□□□□ -0.19
LRRC28-216ENST00000559819 KIF15Q9NS87 1388 aa13.86□□□□□ -0.19
LRRC28-216ENST00000559819 BCORL1Q5H9F3 1711 aa13.85□□□□□ -0.19
LRRC28-216ENST00000559819 KDM2AQ9Y2K7 1162 aa13.83□□□□□ -0.2
LRRC28-216ENST00000559819 POLR1AO95602 1720 aaPredicted RBP13.83□□□□□ -0.2
LRRC28-216ENST00000559819 SAMD9LQ8IVG5 1584 aa13.83□□□□□ -0.2
LRRC28-216ENST00000559819 DHX29Q7Z478 1369 aaKnown RBP13.81□□□□□ -0.2
LRRC28-216ENST00000559819 KDM5CP41229 1560 aa13.81□□□□□ -0.2
LRRC28-216ENST00000559819 ARHGEF5Q12774 1597 aa13.81□□□□□ -0.2
LRRC28-216ENST00000559819 KDM5DQ9BY66 1539 aa13.81□□□□□ -0.2
LRRC28-216ENST00000559819 CHD1O14646 1710 aa13.8□□□□□ -0.2
LRRC28-216ENST00000559819 CDC42BPBQ9Y5S2 1711 aa13.8□□□□□ -0.2
LRRC28-216ENST00000559819 CCDC141Q6ZP82 1450 aa13.8□□□□□ -0.2
LRRC28-216ENST00000559819 UHRF1BP1Q6BDS2 1440 aa13.79□□□□□ -0.2
LRRC28-216ENST00000559819 CARD11Q9BXL7 1154 aa13.79□□□□□ -0.2
LRRC28-216ENST00000559819 RALGAPBQ86X10 1494 aa13.79□□□□□ -0.2
LRRC28-216ENST00000559819 PREX2Q70Z35 1606 aa13.79□□□□□ -0.2
LRRC28-216ENST00000559819 DCAF11Q8TEB1 546 aa13.78□□□□□ -0.2
LRRC28-216ENST00000559819 ERCC6L2Q5T890 1561 aa13.78□□□□□ -0.2
LRRC28-216ENST00000559819 SYCP2Q9BX26 1530 aa13.77□□□□□ -0.2
LRRC28-216ENST00000559819 TTC37Q6PGP7 1564 aa13.77□□□□□ -0.2
LRRC28-216ENST00000559819 ZBED9Q6R2W3 1325 aa13.76□□□□□ -0.21
LRRC28-216ENST00000559819 FAM135AQ9P2D6 1515 aa13.76□□□□□ -0.21
LRRC28-216ENST00000559819 SENP3-EIF4A1A0A087X0R7 540 aa13.76□□□□□ -0.21
LRRC28-216ENST00000559819 ARHGAP5Q13017 1502 aa13.75□□□□□ -0.21
LRRC28-216ENST00000559819 ST20-MTHFSA0A0A6YYL1 179 aa13.75□□□□□ -0.21
LRRC28-216ENST00000559819 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.75□□□□□ -0.21
LRRC28-216ENST00000559819 ARHGEF12Q9NZN5 1544 aa13.75□□□□□ -0.21
LRRC28-216ENST00000559819 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.75□□□□□ -0.21
LRRC28-216ENST00000559819 RBM19Q9Y4C8 960 aaKnown RBP13.73□□□□□ -0.21
LRRC28-216ENST00000559819 SHROOM2Q13796 1616 aa13.72□□□□□ -0.21
LRRC28-216ENST00000559819 RGL3Q3MIN7 710 aa13.72□□□□□ -0.21
LRRC28-216ENST00000559819 ROCK2O75116 1388 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms