RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 MAP3K4Q9Y6R4 1608 aa14.27□□□□□ -0.12
HMG20A-209ENST00000559728 LRRC9Q6ZRR7 1453 aa14.27□□□□□ -0.12
HMG20A-209ENST00000559728 CD109Q6YHK3 1445 aa14.27□□□□□ -0.12
HMG20A-209ENST00000559728 TTC37Q6PGP7 1564 aa14.26□□□□□ -0.13
HMG20A-209ENST00000559728 PPRC1Q5VV67 1664 aaKnown RBP14.26□□□□□ -0.13
HMG20A-209ENST00000559728 MTUS2Q5JR59 1369 aa14.25□□□□□ -0.13
HMG20A-209ENST00000559728 EHBP1L1Q8N3D4 1523 aa14.24□□□□□ -0.13
HMG20A-209ENST00000559728 PLCH2O75038 1416 aa14.23□□□□□ -0.13
HMG20A-209ENST00000559728 GPATCH8Q9UKJ3 1502 aaKnown RBP14.2□□□□□ -0.14
HMG20A-209ENST00000559728 NCOA2Q15596 1464 aa14.2□□□□□ -0.14
HMG20A-209ENST00000559728 COL17A1Q9UMD9 1497 aaPredicted RBP14.2□□□□□ -0.14
HMG20A-209ENST00000559728 ARAP3Q8WWN8 1544 aa14.17□□□□□ -0.14
HMG20A-209ENST00000559728 APLP2Q06481 763 aa14.16□□□□□ -0.14
HMG20A-209ENST00000559728 PHLDB1Q86UU1 1377 aa14.16□□□□□ -0.14
HMG20A-209ENST00000559728 TEX14Q8IWB6 1497 aa14.16□□□□□ -0.14
HMG20A-209ENST00000559728 FANCAO15360 1455 aa14.15□□□□□ -0.14
HMG20A-209ENST00000559728 NEO1Q92859 1461 aa14.15□□□□□ -0.14
HMG20A-209ENST00000559728 CCNB3Q8WWL7 1395 aa14.15□□□□□ -0.14
HMG20A-209ENST00000559728 AKNAQ7Z591 1439 aa14.14□□□□□ -0.15
HMG20A-209ENST00000559728 TSPOAP1O95153 1857 aa14.13□□□□□ -0.15
HMG20A-209ENST00000559728 PPARGC1BQ86YN6 1023 aaKnown RBP14.13□□□□□ -0.15
HMG20A-209ENST00000559728 SUPT6HQ7KZ85 1726 aaKnown RBP14.12□□□□□ -0.15
HMG20A-209ENST00000559728 PREX2Q70Z35 1606 aa14.12□□□□□ -0.15
HMG20A-209ENST00000559728 ARHGEF12Q9NZN5 1544 aa14.12□□□□□ -0.15
HMG20A-209ENST00000559728 EFCAB2Q5VUJ9 269 aa14.12□□□□□ -0.15
HMG20A-209ENST00000559728 ZNF644Q9H582 1327 aaPredicted RBP14.12□□□□□ -0.15
HMG20A-209ENST00000559728 CDC42BPAQ5VT25 1732 aa14.11□□□□□ -0.15
HMG20A-209ENST00000559728 CDC42BPBQ9Y5S2 1711 aa14.11□□□□□ -0.15
HMG20A-209ENST00000559728 ARHGAP5Q13017 1502 aa14.1□□□□□ -0.15
HMG20A-209ENST00000559728 CFDP1Q9UEE9 299 aaPredicted RBP14.1□□□□□ -0.15
HMG20A-209ENST00000559728 MYO5CQ9NQX4 1742 aa14.1□□□□□ -0.15
HMG20A-209ENST00000559728 MYOM3Q5VTT5 1437 aa14.09□□□□□ -0.15
HMG20A-209ENST00000559728 SCAPERQ9BY12 1400 aa14.08□□□□□ -0.15
HMG20A-209ENST00000559728 RAPGEF3O95398 923 aa14.08□□□□□ -0.16
HMG20A-209ENST00000559728 SAMD9LQ8IVG5 1584 aa14.08□□□□□ -0.16
HMG20A-209ENST00000559728 ADGRL1O94910 1474 aa14.07□□□□□ -0.16
HMG20A-209ENST00000559728 ABCC1P33527 1531 aa14.07□□□□□ -0.16
HMG20A-209ENST00000559728 MIA2Q96PC5 1412 aa14.07□□□□□ -0.16
HMG20A-209ENST00000559728 MBD5Q9P267 1494 aa14.06□□□□□ -0.16
HMG20A-209ENST00000559728 FRMPD1Q5SYB0 1578 aa14.06□□□□□ -0.16
HMG20A-209ENST00000559728 KIAA1107Q9UPP5 1409 aa14.06□□□□□ -0.16
HMG20A-209ENST00000559728 TRAPPC8Q9Y2L5 1435 aa14.06□□□□□ -0.16
HMG20A-209ENST00000559728 DENND4BO75064 1496 aaPredicted RBP14.06□□□□□ -0.16
HMG20A-209ENST00000559728 KDM6BO15054 1643 aa14.05□□□□□ -0.16
HMG20A-209ENST00000559728 ZNF777Q9ULD5 760 aaPredicted RBP14.05□□□□□ -0.16
HMG20A-209ENST00000559728 FGD6Q6ZV73 1430 aa14.05□□□□□ -0.16
HMG20A-209ENST00000559728 POGZQ7Z3K3 1410 aa14.05□□□□□ -0.16
HMG20A-209ENST00000559728 HNRNPMP52272 730 aaKnown RBP eCLIP14.04□□□□□ -0.16
HMG20A-209ENST00000559728 AFAP1Q8N556 730 aa14.04□□□□□ -0.16
HMG20A-209ENST00000559728 CFAP74Q9C0B2 1584 aa14.04□□□□□ -0.16
HMG20A-209ENST00000559728 CAMSAP2Q08AD1 1489 aa14.03□□□□□ -0.16
HMG20A-209ENST00000559728 TCOF1Q13428 1488 aaKnown RBP14.03□□□□□ -0.16
HMG20A-209ENST00000559728 ITSN2Q9NZM3 1697 aa14.02□□□□□ -0.16
HMG20A-209ENST00000559728 SYCP2Q9BX26 1530 aa14.02□□□□□ -0.16
HMG20A-209ENST00000559728 PLEKHH2Q8IVE3 1493 aa14□□□□□ -0.17
HMG20A-209ENST00000559728 KDM5CP41229 1560 aa14□□□□□ -0.17
HMG20A-209ENST00000559728 RICTORQ6R327 1708 aa13.99□□□□□ -0.17
HMG20A-209ENST00000559728 ZMYM4Q5VZL5 1548 aa13.99□□□□□ -0.17
HMG20A-209ENST00000559728 ZNF518AQ6AHZ1 1483 aa13.99□□□□□ -0.17
HMG20A-209ENST00000559728 YEATS2Q9ULM3 1422 aa13.98□□□□□ -0.17
HMG20A-209ENST00000559728 RRBP1Q9P2E9 1410 aaKnown RBP13.97□□□□□ -0.17
HMG20A-209ENST00000559728 PTPN23Q9H3S7 1636 aa13.97□□□□□ -0.17
HMG20A-209ENST00000559728 MLH3Q9UHC1 1453 aa13.96□□□□□ -0.17
HMG20A-209ENST00000559728 ABCC5O15440 1437 aa13.96□□□□□ -0.18
HMG20A-209ENST00000559728 ARHGEF5Q12774 1597 aa13.95□□□□□ -0.18
HMG20A-209ENST00000559728 CCDC141Q6ZP82 1450 aa13.94□□□□□ -0.18
HMG20A-209ENST00000559728 PTPRKQ15262 1439 aa13.94□□□□□ -0.18
HMG20A-209ENST00000559728 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.94□□□□□ -0.18
HMG20A-209ENST00000559728 MAGI2Q86UL8 1455 aa13.93□□□□□ -0.18
HMG20A-209ENST00000559728 RSPH4AQ5TD94 716 aa13.93□□□□□ -0.18
HMG20A-209ENST00000559728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.92□□□□□ -0.18
HMG20A-209ENST00000559728 SPAG9O60271 1321 aaKnown RBP13.91□□□□□ -0.18
HMG20A-209ENST00000559728 RTEL1-TNFRSF6BF6WH68 1400 aa13.91□□□□□ -0.18
HMG20A-209ENST00000559728 DAPK1P53355 1430 aa13.91□□□□□ -0.18
HMG20A-209ENST00000559728 ZFYVE16Q7Z3T8 1539 aa13.91□□□□□ -0.18
HMG20A-209ENST00000559728 FAM50AQ14320 339 aaKnown RBP13.91□□□□□ -0.18
HMG20A-209ENST00000559728 INO80Q9ULG1 1556 aaPredicted RBP13.91□□□□□ -0.18
HMG20A-209ENST00000559728 ARHGEF40Q8TER5 1519 aa13.9□□□□□ -0.19
HMG20A-209ENST00000559728 KIDINS220Q9ULH0 1771 aa13.89□□□□□ -0.19
HMG20A-209ENST00000559728 HECW2Q9P2P5 1572 aa13.89□□□□□ -0.19
HMG20A-209ENST00000559728 DNMT1P26358 1616 aaKnown RBP13.89□□□□□ -0.19
HMG20A-209ENST00000559728 C9orf84Q5VXU9 1444 aa13.89□□□□□ -0.19
HMG20A-209ENST00000559728 DIP2CQ9Y2E4 1556 aa13.88□□□□□ -0.19
HMG20A-209ENST00000559728 MAST1Q9Y2H9 1570 aa13.88□□□□□ -0.19
HMG20A-209ENST00000559728 SHANK2Q9UPX8 1470 aa13.88□□□□□ -0.19
HMG20A-209ENST00000559728 ABCA6Q8N139 1617 aa13.88□□□□□ -0.19
HMG20A-209ENST00000559728 ATP7AQ04656 1500 aa13.88□□□□□ -0.19
HMG20A-209ENST00000559728 ATP10AO60312 1499 aa13.87□□□□□ -0.19
HMG20A-209ENST00000559728 SLC4A2P04920 1241 aa13.86□□□□□ -0.19
HMG20A-209ENST00000559728 TSPY4P0CV99 314 aa13.86□□□□□ -0.19
HMG20A-209ENST00000559728 TSPY10P0CW01 314 aa13.86□□□□□ -0.19
HMG20A-209ENST00000559728 SIGLEC1Q9BZZ2 1709 aa13.86□□□□□ -0.19
HMG20A-209ENST00000559728 ADGRL2O95490 1459 aa13.85□□□□□ -0.19
HMG20A-209ENST00000559728 NCOA1Q15788 1441 aa13.84□□□□□ -0.19
HMG20A-209ENST00000559728 CHIC2Q9UKJ5 165 aa13.84□□□□□ -0.19
HMG20A-209ENST00000559728 REREQ9P2R6 1566 aa13.83□□□□□ -0.19
HMG20A-209ENST00000559728 PLXNC1O60486 1568 aa13.83□□□□□ -0.2
HMG20A-209ENST00000559728 DHX29Q7Z478 1369 aaKnown RBP13.83□□□□□ -0.2
HMG20A-209ENST00000559728 CROCC2H7BZ55 1655 aa13.82□□□□□ -0.2
HMG20A-209ENST00000559728 A2MP01023 1474 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms