RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 RANGAP1P46060 587 aaPredicted RBP15.42■□□□□ 0.06
SNRPA1-208ENST00000559686 ZFYVE16Q7Z3T8 1539 aa15.42■□□□□ 0.06
SNRPA1-208ENST00000559686 PREX1Q8TCU6 1659 aa15.4■□□□□ 0.06
SNRPA1-208ENST00000559686 TTC37Q6PGP7 1564 aa15.4■□□□□ 0.06
SNRPA1-208ENST00000559686 CFAP74Q9C0B2 1584 aa15.4■□□□□ 0.06
SNRPA1-208ENST00000559686 EFCAB5A4FU69 1503 aa15.39■□□□□ 0.05
SNRPA1-208ENST00000559686 PRXQ9BXM0 1461 aa15.39■□□□□ 0.05
SNRPA1-208ENST00000559686 CEBPAP49715 358 aaPredicted RBP15.38■□□□□ 0.05
SNRPA1-208ENST00000559686 STRCQ7RTU9 1775 aa15.37■□□□□ 0.05
SNRPA1-208ENST00000559686 FHOD3Q2V2M9 1422 aa15.37■□□□□ 0.05
SNRPA1-208ENST00000559686 HECW1Q76N89 1606 aa15.37■□□□□ 0.05
SNRPA1-208ENST00000559686 NUP153P49790 1475 aaKnown RBP15.37■□□□□ 0.05
SNRPA1-208ENST00000559686 ZMYM4Q5VZL5 1548 aa15.37■□□□□ 0.05
SNRPA1-208ENST00000559686 SAMD9Q5K651 1589 aa15.36■□□□□ 0.05
SNRPA1-208ENST00000559686 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.35■□□□□ 0.05
SNRPA1-208ENST00000559686 PLEKHD1A6NEE1 506 aa15.34■□□□□ 0.05
SNRPA1-208ENST00000559686 PPP4R3CPQ6ZMV5 832 aa15.32■□□□□ 0.04
SNRPA1-208ENST00000559686 ARHGEF12Q9NZN5 1544 aa15.3■□□□□ 0.04
SNRPA1-208ENST00000559686 MAGI2Q86UL8 1455 aa15.29■□□□□ 0.04
SNRPA1-208ENST00000559686 UHRF1BP1Q6BDS2 1440 aa15.29■□□□□ 0.04
SNRPA1-208ENST00000559686 SCAPERQ9BY12 1400 aa15.29■□□□□ 0.04
SNRPA1-208ENST00000559686 ATP10AO60312 1499 aa15.27■□□□□ 0.03
SNRPA1-208ENST00000559686 C9orf84Q5VXU9 1444 aa15.26■□□□□ 0.03
SNRPA1-208ENST00000559686 MYT1LQ9UL68 1186 aa15.25■□□□□ 0.03
SNRPA1-208ENST00000559686 CDK13Q14004 1512 aaKnown RBP15.25■□□□□ 0.03
SNRPA1-208ENST00000559686 C3P01024 1663 aa15.22■□□□□ 0.03
SNRPA1-208ENST00000559686 LTBP4Q8N2S1 1624 aa15.22■□□□□ 0.03
SNRPA1-208ENST00000559686 MYO5CQ9NQX4 1742 aa15.21■□□□□ 0.03
SNRPA1-208ENST00000559686 PTPRTO14522 1441 aa15.2■□□□□ 0.02
SNRPA1-208ENST00000559686 DCAF8L1A6NGE4 600 aa15.2■□□□□ 0.02
SNRPA1-208ENST00000559686 ATP1B4Q9UN42 357 aaPredicted RBP15.2■□□□□ 0.02
SNRPA1-208ENST00000559686 PLCH2O75038 1416 aa15.19■□□□□ 0.02
SNRPA1-208ENST00000559686 CSRNP3Q8WYN3 585 aa15.18■□□□□ 0.02
SNRPA1-208ENST00000559686 SETD1BQ9UPS6 1966 aaKnown RBP15.17■□□□□ 0.02
SNRPA1-208ENST00000559686 UBAP1LF5GYI3 381 aa15.16■□□□□ 0.02
SNRPA1-208ENST00000559686 EFCAB2Q5VUJ9 269 aa15.16■□□□□ 0.02
SNRPA1-208ENST00000559686 AFAP1Q8N556 730 aa15.16■□□□□ 0.02
SNRPA1-208ENST00000559686 ESF1Q9H501 851 aaKnown RBP15.16■□□□□ 0.02
SNRPA1-208ENST00000559686 DIP2CQ9Y2E4 1556 aa15.15■□□□□ 0.02
SNRPA1-208ENST00000559686 CACNB1Q02641 598 aaPredicted RBP15.15■□□□□ 0.02
SNRPA1-208ENST00000559686 KIF14Q15058 1648 aa15.14■□□□□ 0.01
SNRPA1-208ENST00000559686 ZNF518AQ6AHZ1 1483 aa15.14■□□□□ 0.01
SNRPA1-208ENST00000559686 ABCA6Q8N139 1617 aa15.14■□□□□ 0.01
SNRPA1-208ENST00000559686 ARHGAP5Q13017 1502 aa15.13■□□□□ 0.01
SNRPA1-208ENST00000559686 IQSEC2Q5JU85 1478 aa15.13■□□□□ 0.01
SNRPA1-208ENST00000559686 NCOA1Q15788 1441 aa15.12■□□□□ 0.01
SNRPA1-208ENST00000559686 CAMSAP1Q5T5Y3 1602 aa15.12■□□□□ 0.01
SNRPA1-208ENST00000559686 ZNF335Q9H4Z2 1342 aaPredicted RBP15.11■□□□□ 0.01
SNRPA1-208ENST00000559686 NCKAP5LQ9HCH0 1330 aa15.11■□□□□ 0.01
SNRPA1-208ENST00000559686 KDM5CP41229 1560 aa15.11■□□□□ 0.01
SNRPA1-208ENST00000559686 EHMT2Q96KQ7 1210 aa15.1■□□□□ 0.01
SNRPA1-208ENST00000559686 TRAPPC8Q9Y2L5 1435 aa15.09■□□□□ 0.01
SNRPA1-208ENST00000559686 HOXD11P31277 338 aaPredicted RBP15.09■□□□□ 0.01
SNRPA1-208ENST00000559686 SUPT6HQ7KZ85 1726 aaKnown RBP15.07■□□□□ 0
SNRPA1-208ENST00000559686 REREQ9P2R6 1566 aa15.07■□□□□ 0
SNRPA1-208ENST00000559686 MED1Q15648 1581 aaPredicted RBP15.06■□□□□ 0
SNRPA1-208ENST00000559686 CNKSR2Q8WXI2 1034 aa15.05■□□□□ -0
SNRPA1-208ENST00000559686 CDC42BPBQ9Y5S2 1711 aa15.05■□□□□ -0
SNRPA1-208ENST00000559686 PIP4K2BP78356 416 aa15.04■□□□□ -0
SNRPA1-208ENST00000559686 AGLP35573 1532 aa15.02■□□□□ -0
SNRPA1-208ENST00000559686 HSPA1LP34931 641 aa15.02■□□□□ -0
SNRPA1-208ENST00000559686 CDK11AQ9UQ88 783 aaPredicted RBP15.02■□□□□ -0
SNRPA1-208ENST00000559686 ITSN2Q9NZM3 1697 aa15.02□□□□□ -0.01
SNRPA1-208ENST00000559686 MLH3Q9UHC1 1453 aa15.01□□□□□ -0.01
SNRPA1-208ENST00000559686 KIDINS220Q9ULH0 1771 aa15.01□□□□□ -0.01
SNRPA1-208ENST00000559686 TROQ12816 1431 aaPredicted RBP15□□□□□ -0.01
SNRPA1-208ENST00000559686 LRRIQ1Q96JM4 1722 aa15□□□□□ -0.01
SNRPA1-208ENST00000559686 MROH2AA6NES4 1674 aa15□□□□□ -0.01
SNRPA1-208ENST00000559686 CLTCQ00610 1675 aaKnown RBP15□□□□□ -0.01
SNRPA1-208ENST00000559686 MYO3AQ8NEV4 1616 aa15□□□□□ -0.01
SNRPA1-208ENST00000559686 CLIP1P30622 1438 aa15□□□□□ -0.01
SNRPA1-208ENST00000559686 CNTLNQ9NXG0 1405 aa15□□□□□ -0.01
SNRPA1-208ENST00000559686 ABCC1P33527 1531 aa14.99□□□□□ -0.01
SNRPA1-208ENST00000559686 PREX2Q70Z35 1606 aa14.98□□□□□ -0.01
SNRPA1-208ENST00000559686 ZMYM3Q14202 1370 aa14.98□□□□□ -0.01
SNRPA1-208ENST00000559686 NPATQ14207 1427 aa14.97□□□□□ -0.01
SNRPA1-208ENST00000559686 ZNF142P52746 1687 aaPredicted RBP14.97□□□□□ -0.01
SNRPA1-208ENST00000559686 FMN1Q68DA7 1419 aa14.96□□□□□ -0.01
SNRPA1-208ENST00000559686 CEP170BQ9Y4F5 1589 aaPredicted RBP14.95□□□□□ -0.02
SNRPA1-208ENST00000559686 EEA1Q15075 1411 aa14.95□□□□□ -0.02
SNRPA1-208ENST00000559686 RNF216Q9NWF9 866 aaPredicted RBP14.95□□□□□ -0.02
SNRPA1-208ENST00000559686 ZNF777Q9ULD5 760 aaPredicted RBP14.95□□□□□ -0.02
SNRPA1-208ENST00000559686 UBTFP17480 764 aaKnown RBP14.94□□□□□ -0.02
SNRPA1-208ENST00000559686 PKD2Q13563 968 aa14.94□□□□□ -0.02
SNRPA1-208ENST00000559686 CDC42BPAQ5VT25 1732 aa14.92□□□□□ -0.02
SNRPA1-208ENST00000559686 PLA2R1Q13018 1463 aa14.92□□□□□ -0.02
SNRPA1-208ENST00000559686 TCOF1Q13428 1488 aaKnown RBP14.92□□□□□ -0.02
SNRPA1-208ENST00000559686 ARHGAP35Q9NRY4 1499 aa14.92□□□□□ -0.02
SNRPA1-208ENST00000559686 SAMD9LQ8IVG5 1584 aa14.92□□□□□ -0.02
SNRPA1-208ENST00000559686 TOM1O60784 492 aa14.9□□□□□ -0.02
SNRPA1-208ENST00000559686 GGT6Q6P531 493 aa14.9□□□□□ -0.02
SNRPA1-208ENST00000559686 SYCP2Q9BX26 1530 aa14.89□□□□□ -0.03
SNRPA1-208ENST00000559686 PTPRKQ15262 1439 aa14.89□□□□□ -0.03
SNRPA1-208ENST00000559686 SPAG9O60271 1321 aaKnown RBP14.89□□□□□ -0.03
SNRPA1-208ENST00000559686 POLR1AO95602 1720 aaPredicted RBP14.89□□□□□ -0.03
SNRPA1-208ENST00000559686 RNF39Q9H2S5 420 aa14.88□□□□□ -0.03
SNRPA1-208ENST00000559686 HNRNPMP52272 730 aaKnown RBP eCLIP14.87□□□□□ -0.03
SNRPA1-208ENST00000559686 DNMT1P26358 1616 aaKnown RBP14.86□□□□□ -0.03
SNRPA1-208ENST00000559686 ATP7AQ04656 1500 aa14.86□□□□□ -0.03
SNRPA1-208ENST00000559686 SHANK2Q9UPX8 1470 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms