RNA–Protein interactions for RNA: ENST00000559670.5

LRRC49-218, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 527 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-218ENST00000559670 DISP1Q96F81 1524 aa13.16□□□□□ -0.3
LRRC49-218ENST00000559670 IGF1RP08069 1367 aa13.16□□□□□ -0.3
LRRC49-218ENST00000559670 ARID4BQ4LE39 1312 aaPredicted RBP13.14□□□□□ -0.31
LRRC49-218ENST00000559670 CHRDL2Q6WN34 429 aa13.13□□□□□ -0.31
LRRC49-218ENST00000559670 AKT1S1Q96B36 256 aa13.12□□□□□ -0.31
LRRC49-218ENST00000559670 KCNH8Q96L42 1107 aa13.12□□□□□ -0.31
LRRC49-218ENST00000559670 PHLDB1Q86UU1 1377 aa13.09□□□□□ -0.31
LRRC49-218ENST00000559670 KIF27Q86VH2 1401 aa13.08□□□□□ -0.32
LRRC49-218ENST00000559670 KIAA0556O60303 1618 aa13.08□□□□□ -0.32
LRRC49-218ENST00000559670 UGGT2Q9NYU1 1516 aa13.07□□□□□ -0.32
LRRC49-218ENST00000559670 CARMIL1Q5VZK9 1371 aa13.07□□□□□ -0.32
LRRC49-218ENST00000559670 RAPGEF3O95398 923 aa13.06□□□□□ -0.32
LRRC49-218ENST00000559670 YEATS2Q9ULM3 1422 aa13.05□□□□□ -0.32
LRRC49-218ENST00000559670 ARHGEF40Q8TER5 1519 aa13.05□□□□□ -0.32
LRRC49-218ENST00000559670 FRMPD1Q5SYB0 1578 aa13.05□□□□□ -0.32
LRRC49-218ENST00000559670 PREX1Q8TCU6 1659 aa13.03□□□□□ -0.32
LRRC49-218ENST00000559670 STRCQ7RTU9 1775 aa13.03□□□□□ -0.32
LRRC49-218ENST00000559670 IQSEC2Q5JU85 1478 aa13.03□□□□□ -0.32
LRRC49-218ENST00000559670 POGZQ7Z3K3 1410 aa13.02□□□□□ -0.33
LRRC49-218ENST00000559670 NEO1Q92859 1461 aa13.02□□□□□ -0.33
LRRC49-218ENST00000559670 ABCA9Q8IUA7 1624 aa13□□□□□ -0.33
LRRC49-218ENST00000559670 ABCA8O94911 1581 aa13□□□□□ -0.33
LRRC49-218ENST00000559670 TTC37Q6PGP7 1564 aa13□□□□□ -0.33
LRRC49-218ENST00000559670 FANCAO15360 1455 aa13□□□□□ -0.33
LRRC49-218ENST00000559670 REM2Q8IYK8 340 aaPredicted RBP13□□□□□ -0.33
LRRC49-218ENST00000559670 FER1L4A9Z1Z3 1794 aa12.99□□□□□ -0.33
LRRC49-218ENST00000559670 LTBP4Q8N2S1 1624 aa12.97□□□□□ -0.33
LRRC49-218ENST00000559670 PTPRTO14522 1441 aa12.96□□□□□ -0.33
LRRC49-218ENST00000559670 AKNAQ7Z591 1439 aa12.95□□□□□ -0.34
LRRC49-218ENST00000559670 MKRN4PQ13434 485 aaPredicted RBP12.94□□□□□ -0.34
LRRC49-218ENST00000559670 SIGLEC1Q9BZZ2 1709 aa12.93□□□□□ -0.34
LRRC49-218ENST00000559670 MED1Q15648 1581 aaPredicted RBP12.93□□□□□ -0.34
LRRC49-218ENST00000559670 RICTORQ6R327 1708 aa12.93□□□□□ -0.34
LRRC49-218ENST00000559670 UHRF1BP1Q6BDS2 1440 aa12.91□□□□□ -0.34
LRRC49-218ENST00000559670 DENND4BO75064 1496 aaPredicted RBP12.91□□□□□ -0.34
LRRC49-218ENST00000559670 MLECQ14165 292 aa12.9□□□□□ -0.34
LRRC49-218ENST00000559670 GOLGA3Q08378 1498 aa12.9□□□□□ -0.34
LRRC49-218ENST00000559670 FHOD3Q2V2M9 1422 aa12.89□□□□□ -0.35
LRRC49-218ENST00000559670 EFCAB5A4FU69 1503 aa12.89□□□□□ -0.35
LRRC49-218ENST00000559670 ZFYVE16Q7Z3T8 1539 aa12.89□□□□□ -0.35
LRRC49-218ENST00000559670 SPDYE2BA6NHP3 402 aa12.89□□□□□ -0.35
LRRC49-218ENST00000559670 PITPNM1O00562 1244 aa12.89□□□□□ -0.35
LRRC49-218ENST00000559670 SPDYE6P0CI01 402 aa12.89□□□□□ -0.35
LRRC49-218ENST00000559670 SPDYE2Q495Y8 402 aa12.89□□□□□ -0.35
LRRC49-218ENST00000559670 ZMYM4Q5VZL5 1548 aa12.88□□□□□ -0.35
LRRC49-218ENST00000559670 ARHGEF12Q9NZN5 1544 aa12.88□□□□□ -0.35
LRRC49-218ENST00000559670 RAPGEF2Q9Y4G8 1499 aa12.87□□□□□ -0.35
LRRC49-218ENST00000559670 UBAP1LF5GYI3 381 aa12.87□□□□□ -0.35
LRRC49-218ENST00000559670 SETD1BQ9UPS6 1966 aaKnown RBP12.87□□□□□ -0.35
LRRC49-218ENST00000559670 ATP10BO94823 1461 aa12.86□□□□□ -0.35
LRRC49-218ENST00000559670 MAGI2Q86UL8 1455 aa12.85□□□□□ -0.35
LRRC49-218ENST00000559670 CTTNBP2Q8WZ74 1663 aa12.84□□□□□ -0.35
LRRC49-218ENST00000559670 ARID3CA6NKF2 412 aa12.84□□□□□ -0.35
LRRC49-218ENST00000559670 CEBPAP49715 358 aaPredicted RBP12.84□□□□□ -0.35
LRRC49-218ENST00000559670 CFAP74Q9C0B2 1584 aa12.84□□□□□ -0.35
LRRC49-218ENST00000559670 PIP4P2Q8N4L2 257 aa12.83□□□□□ -0.36
LRRC49-218ENST00000559670 SUPT5HO00267 1087 aaKnown RBP12.8□□□□□ -0.36
LRRC49-218ENST00000559670 HECW1Q76N89 1606 aa12.8□□□□□ -0.36
LRRC49-218ENST00000559670 NCOA1Q15788 1441 aa12.79□□□□□ -0.36
LRRC49-218ENST00000559670 FAM9AQ8IZU1 332 aaPredicted RBP12.79□□□□□ -0.36
LRRC49-218ENST00000559670 HSPA1LP34931 641 aa12.77□□□□□ -0.37
LRRC49-218ENST00000559670 C9orf84Q5VXU9 1444 aa12.77□□□□□ -0.37
LRRC49-218ENST00000559670 ATP10AO60312 1499 aa12.76□□□□□ -0.37
LRRC49-218ENST00000559670 FXR2P51116 673 aaKnown RBP eCLIP12.75□□□□□ -0.37
LRRC49-218ENST00000559670 ZNF335Q9H4Z2 1342 aaPredicted RBP12.75□□□□□ -0.37
LRRC49-218ENST00000559670 SSUH2Q9Y2M2 353 aa12.75□□□□□ -0.37
LRRC49-218ENST00000559670 C3P01024 1663 aa12.74□□□□□ -0.37
LRRC49-218ENST00000559670 ZNF692Q9BU19 519 aaPredicted RBP12.73□□□□□ -0.37
LRRC49-218ENST00000559670 TRAPPC8Q9Y2L5 1435 aa12.71□□□□□ -0.37
LRRC49-218ENST00000559670 CAMSAP1Q5T5Y3 1602 aa12.71□□□□□ -0.37
LRRC49-218ENST00000559670 RAPGEF6Q8TEU7 1601 aa12.71□□□□□ -0.37
LRRC49-218ENST00000559670 SCAPERQ9BY12 1400 aa12.69□□□□□ -0.38
LRRC49-218ENST00000559670 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.68□□□□□ -0.38
LRRC49-218ENST00000559670 PIP4K2BP78356 416 aa12.68□□□□□ -0.38
LRRC49-218ENST00000559670 TOM1O60784 492 aa12.66□□□□□ -0.38
LRRC49-218ENST00000559670 NCKAP5LQ9HCH0 1330 aa12.65□□□□□ -0.38
LRRC49-218ENST00000559670 P3H3Q8IVL6 736 aa12.65□□□□□ -0.38
LRRC49-218ENST00000559670 SPDYE1Q8NFV5 336 aaPredicted RBP12.65□□□□□ -0.38
LRRC49-218ENST00000559670 NUP153P49790 1475 aaKnown RBP12.65□□□□□ -0.38
LRRC49-218ENST00000559670 PLEKHD1A6NEE1 506 aa12.64□□□□□ -0.39
LRRC49-218ENST00000559670 ESF1Q9H501 851 aaKnown RBP12.63□□□□□ -0.39
LRRC49-218ENST00000559670 REREQ9P2R6 1566 aa12.63□□□□□ -0.39
LRRC49-218ENST00000559670 PLA2R1Q13018 1463 aa12.62□□□□□ -0.39
LRRC49-218ENST00000559670 PKD2Q13563 968 aa12.62□□□□□ -0.39
LRRC49-218ENST00000559670 CLEC11AQ9Y240 323 aa12.62□□□□□ -0.39
LRRC49-218ENST00000559670 AGLP35573 1532 aa12.61□□□□□ -0.39
LRRC49-218ENST00000559670 NPATQ14207 1427 aa12.61□□□□□ -0.39
LRRC49-218ENST00000559670 DIP2CQ9Y2E4 1556 aa12.6□□□□□ -0.39
LRRC49-218ENST00000559670 SUPT6HQ7KZ85 1726 aaKnown RBP12.6□□□□□ -0.39
LRRC49-218ENST00000559670 SP7Q8TDD2 431 aaPredicted RBP12.6□□□□□ -0.39
LRRC49-218ENST00000559670 CNTLNQ9NXG0 1405 aa12.6□□□□□ -0.39
LRRC49-218ENST00000559670 SAMD9Q5K651 1589 aa12.6□□□□□ -0.39
LRRC49-218ENST00000559670 TCOF1Q13428 1488 aaKnown RBP12.59□□□□□ -0.39
LRRC49-218ENST00000559670 ZNF518AQ6AHZ1 1483 aa12.59□□□□□ -0.39
LRRC49-218ENST00000559670 CPS1P31327 1500 aa12.59□□□□□ -0.39
LRRC49-218ENST00000559670 ZNF142P52746 1687 aaPredicted RBP12.59□□□□□ -0.39
LRRC49-218ENST00000559670 PLCH2O75038 1416 aa12.59□□□□□ -0.39
LRRC49-218ENST00000559670 KDM5CP41229 1560 aa12.58□□□□□ -0.4
LRRC49-218ENST00000559670 RGS17Q9UGC6 210 aaPredicted RBP12.58□□□□□ -0.4
LRRC49-218ENST00000559670 PTPRKQ15262 1439 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms