RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 TIMELESSQ9UNS1 1208 aa15.95■□□□□ 0.14
SPG11-217ENST00000559511 RRP7BPQ9NSQ0 103 aa15.95■□□□□ 0.14
SPG11-217ENST00000559511 CHIC2Q9UKJ5 165 aa15.95■□□□□ 0.14
SPG11-217ENST00000559511 AKNAQ7Z591 1439 aa15.94■□□□□ 0.14
SPG11-217ENST00000559511 ZNF644Q9H582 1327 aaPredicted RBP15.94■□□□□ 0.14
SPG11-217ENST00000559511 DAPK1P53355 1430 aa15.93■□□□□ 0.14
SPG11-217ENST00000559511 PLEKHD1A6NEE1 506 aa15.93■□□□□ 0.14
SPG11-217ENST00000559511 ABCC10Q5T3U5 1492 aa15.93■□□□□ 0.14
SPG11-217ENST00000559511 CAMSAP2Q08AD1 1489 aa15.92■□□□□ 0.14
SPG11-217ENST00000559511 ABCC5O15440 1437 aa15.91■□□□□ 0.14
SPG11-217ENST00000559511 CROCC2H7BZ55 1655 aa15.91■□□□□ 0.14
SPG11-217ENST00000559511 ABCC2Q92887 1545 aa15.9■□□□□ 0.14
SPG11-217ENST00000559511 PPP1R15AO75807 674 aaPredicted RBP15.9■□□□□ 0.14
SPG11-217ENST00000559511 DENND4BO75064 1496 aaPredicted RBP15.89■□□□□ 0.13
SPG11-217ENST00000559511 ADGBQ8N7X0 1667 aa15.89■□□□□ 0.13
SPG11-217ENST00000559511 CFDP1Q9UEE9 299 aaPredicted RBP15.89■□□□□ 0.13
SPG11-217ENST00000559511 GTF3C3Q9Y5Q9 886 aa15.88■□□□□ 0.13
SPG11-217ENST00000559511 ROCK1Q13464 1354 aa15.87■□□□□ 0.13
SPG11-217ENST00000559511 TONSLQ96HA7 1378 aa15.87■□□□□ 0.13
SPG11-217ENST00000559511 CDC42BPBQ9Y5S2 1711 aa15.86■□□□□ 0.13
SPG11-217ENST00000559511 KDM5BQ9UGL1 1544 aa15.85■□□□□ 0.13
SPG11-217ENST00000559511 PREX2Q70Z35 1606 aa15.84■□□□□ 0.13
SPG11-217ENST00000559511 ZCCHC11Q5TAX3 1644 aaKnown RBP15.84■□□□□ 0.13
SPG11-217ENST00000559511 ZNF777Q9ULD5 760 aaPredicted RBP15.83■□□□□ 0.12
SPG11-217ENST00000559511 UHRF1BP1LA0JNW5 1464 aa15.82■□□□□ 0.12
SPG11-217ENST00000559511 TRIM52Q96A61 297 aa15.82■□□□□ 0.12
SPG11-217ENST00000559511 TTC37Q6PGP7 1564 aa15.81■□□□□ 0.12
SPG11-217ENST00000559511 ADGRL2O95490 1459 aa15.79■□□□□ 0.12
SPG11-217ENST00000559511 MYO5CQ9NQX4 1742 aa15.79■□□□□ 0.12
SPG11-217ENST00000559511 HIRIP3Q9BW71 556 aaPredicted RBP15.79■□□□□ 0.12
SPG11-217ENST00000559511 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.79■□□□□ 0.12
SPG11-217ENST00000559511 MPHOSPH9Q99550 1183 aa15.79■□□□□ 0.12
SPG11-217ENST00000559511 SAMD9LQ8IVG5 1584 aa15.79■□□□□ 0.12
SPG11-217ENST00000559511 NCOA1Q15788 1441 aa15.78■□□□□ 0.12
SPG11-217ENST00000559511 ARHGEF5Q12774 1597 aa15.77■□□□□ 0.12
SPG11-217ENST00000559511 DDX10Q13206 875 aaKnown RBP15.76■□□□□ 0.11
SPG11-217ENST00000559511 SHANK2Q9UPX8 1470 aa15.76■□□□□ 0.11
SPG11-217ENST00000559511 FOXD1Q16676 465 aa15.74■□□□□ 0.11
SPG11-217ENST00000559511 MBD5Q9P267 1494 aa15.73■□□□□ 0.11
SPG11-217ENST00000559511 ANKRD30AQ9BXX3 1397 aa15.72■□□□□ 0.11
SPG11-217ENST00000559511 C9orf84Q5VXU9 1444 aa15.72■□□□□ 0.11
SPG11-217ENST00000559511 ARHGAP5Q13017 1502 aa15.72■□□□□ 0.11
SPG11-217ENST00000559511 HNRNPMP52272 730 aaKnown RBP eCLIP15.7■□□□□ 0.1
SPG11-217ENST00000559511 ANKRD30BQ9BXX2 1392 aa15.7■□□□□ 0.1
SPG11-217ENST00000559511 KCNH8Q96L42 1107 aa15.69■□□□□ 0.1
SPG11-217ENST00000559511 CCDC141Q6ZP82 1450 aa15.69■□□□□ 0.1
SPG11-217ENST00000559511 SYCP2Q9BX26 1530 aa15.69■□□□□ 0.1
SPG11-217ENST00000559511 OSCARQ8IYS5 282 aa15.68■□□□□ 0.1
SPG11-217ENST00000559511 PZPP20742 1482 aa15.68■□□□□ 0.1
SPG11-217ENST00000559511 RPRD2Q5VT52 1461 aaKnown RBP15.67■□□□□ 0.1
SPG11-217ENST00000559511 ANKRD50Q9ULJ7 1429 aa15.67■□□□□ 0.1
SPG11-217ENST00000559511 TSPY4P0CV99 314 aa15.66■□□□□ 0.1
SPG11-217ENST00000559511 TSPY10P0CW01 314 aa15.66■□□□□ 0.1
SPG11-217ENST00000559511 SLC4A1APQ9BWU0 796 aaKnown RBP15.66■□□□□ 0.1
SPG11-217ENST00000559511 MAST1Q9Y2H9 1570 aa15.65■□□□□ 0.1
SPG11-217ENST00000559511 L3MBTL2Q969R5 705 aa15.65■□□□□ 0.1
SPG11-217ENST00000559511 TEX14Q8IWB6 1497 aa15.65■□□□□ 0.1
SPG11-217ENST00000559511 PLCH2O75038 1416 aa15.64■□□□□ 0.09
SPG11-217ENST00000559511 RSPH4AQ5TD94 716 aa15.64■□□□□ 0.09
SPG11-217ENST00000559511 PLEKHH2Q8IVE3 1493 aa15.63■□□□□ 0.09
SPG11-217ENST00000559511 KIAA1107Q9UPP5 1409 aa15.63■□□□□ 0.09
SPG11-217ENST00000559511 KIF15Q9NS87 1388 aa15.62■□□□□ 0.09
SPG11-217ENST00000559511 WDR7Q9Y4E6 1490 aa15.62■□□□□ 0.09
SPG11-217ENST00000559511 ARHGEF12Q9NZN5 1544 aa15.62■□□□□ 0.09
SPG11-217ENST00000559511 PLXNC1O60486 1568 aa15.6■□□□□ 0.09
SPG11-217ENST00000559511 ABCC1P33527 1531 aa15.6■□□□□ 0.09
SPG11-217ENST00000559511 KDM5DQ9BY66 1539 aa15.6■□□□□ 0.09
SPG11-217ENST00000559511 HSPA5P11021 654 aaKnown RBP15.6■□□□□ 0.09
SPG11-217ENST00000559511 ABCA9Q8IUA7 1624 aa15.6■□□□□ 0.09
SPG11-217ENST00000559511 ARAP3Q8WWN8 1544 aa15.6■□□□□ 0.09
SPG11-217ENST00000559511 EFCAB2Q5VUJ9 269 aa15.58■□□□□ 0.08
SPG11-217ENST00000559511 NBPF8Q3BBV2 869 aa15.57■□□□□ 0.08
SPG11-217ENST00000559511 ANP32CO43423 234 aa15.56■□□□□ 0.08
SPG11-217ENST00000559511 WASHC2AQ641Q2 1341 aa15.55■□□□□ 0.08
SPG11-217ENST00000559511 ASXL2Q76L83 1435 aa15.55■□□□□ 0.08
SPG11-217ENST00000559511 EIF4G2P78344 907 aaKnown RBP eCLIP15.55■□□□□ 0.08
SPG11-217ENST00000559511 NUP155O75694 1391 aa15.55■□□□□ 0.08
SPG11-217ENST00000559511 UNC13BO14795 1591 aa15.54■□□□□ 0.08
SPG11-217ENST00000559511 CCER2I3L3R5 266 aa15.54■□□□□ 0.08
SPG11-217ENST00000559511 PKD2Q13563 968 aa15.54■□□□□ 0.08
SPG11-217ENST00000559511 TRAPPC8Q9Y2L5 1435 aa15.53■□□□□ 0.08
SPG11-217ENST00000559511 DUOX2Q9NRD8 1548 aa15.51■□□□□ 0.07
SPG11-217ENST00000559511 POLR1AO95602 1720 aaPredicted RBP15.51■□□□□ 0.07
SPG11-217ENST00000559511 FAM135AQ9P2D6 1515 aa15.51■□□□□ 0.07
SPG11-217ENST00000559511 FANCAO15360 1455 aa15.5■□□□□ 0.07
SPG11-217ENST00000559511 SPATA31E1Q6ZUB1 1445 aa15.49■□□□□ 0.07
SPG11-217ENST00000559511 C11orf95C9JLR9 678 aaPredicted RBP15.49■□□□□ 0.07
SPG11-217ENST00000559511 IQGAP3Q86VI3 1631 aa15.48■□□□□ 0.07
SPG11-217ENST00000559511 ZFYVE16Q7Z3T8 1539 aa15.47■□□□□ 0.07
SPG11-217ENST00000559511 NPM1P06748 294 aaKnown RBP eCLIP15.47■□□□□ 0.07
SPG11-217ENST00000559511 CCDC7Q96M83 1385 aa15.46■□□□□ 0.07
SPG11-217ENST00000559511 ERBINQ96RT1 1412 aa15.46■□□□□ 0.07
SPG11-217ENST00000559511 CNTLNQ9NXG0 1405 aa15.46■□□□□ 0.06
SPG11-217ENST00000559511 INO80Q9ULG1 1556 aaPredicted RBP15.46■□□□□ 0.06
SPG11-217ENST00000559511 MAGI2Q86UL8 1455 aa15.45■□□□□ 0.06
SPG11-217ENST00000559511 RTEL1-TNFRSF6BF6WH68 1400 aa15.45■□□□□ 0.06
SPG11-217ENST00000559511 DNAJC5Q9H3Z4 198 aa15.45■□□□□ 0.06
SPG11-217ENST00000559511 AFAP1Q8N556 730 aa15.44■□□□□ 0.06
SPG11-217ENST00000559511 ADGRL1O94910 1474 aa15.43■□□□□ 0.06
SPG11-217ENST00000559511 SPAG9O60271 1321 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms