RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 ZNF644Q9H582 1327 aaPredicted RBP23.07■■□□□ 1.28
USP8-208ENST00000559329 PTPRGP23470 1445 aa23.06■■□□□ 1.28
USP8-208ENST00000559329 ABCC10Q5T3U5 1492 aa23.06■■□□□ 1.28
USP8-208ENST00000559329 MIER1Q8N108 512 aa23.05■■□□□ 1.28
USP8-208ENST00000559329 CDC42BPAQ5VT25 1732 aa23.02■■□□□ 1.28
USP8-208ENST00000559329 CROCC2H7BZ55 1655 aa23.02■■□□□ 1.27
USP8-208ENST00000559329 PPP1R15AO75807 674 aaPredicted RBP23■■□□□ 1.27
USP8-208ENST00000559329 CFDP1Q9UEE9 299 aaPredicted RBP23■■□□□ 1.27
USP8-208ENST00000559329 PLEKHD1A6NEE1 506 aa23■■□□□ 1.27
USP8-208ENST00000559329 ADGBQ8N7X0 1667 aa22.99■■□□□ 1.27
USP8-208ENST00000559329 ACIN1Q9UKV3 1341 aaKnown RBP22.99■■□□□ 1.27
USP8-208ENST00000559329 ADGRL2O95490 1459 aa22.98■■□□□ 1.27
USP8-208ENST00000559329 CLASP1Q7Z460 1538 aa22.97■■□□□ 1.27
USP8-208ENST00000559329 KDM5BQ9UGL1 1544 aa22.97■■□□□ 1.27
USP8-208ENST00000559329 ERCC6L2Q5T890 1561 aa22.95■■□□□ 1.27
USP8-208ENST00000559329 TONSLQ96HA7 1378 aa22.95■■□□□ 1.26
USP8-208ENST00000559329 NCOA1Q15788 1441 aa22.93■■□□□ 1.26
USP8-208ENST00000559329 SHANK2Q9UPX8 1470 aa22.91■■□□□ 1.26
USP8-208ENST00000559329 MPHOSPH9Q99550 1183 aa22.9■■□□□ 1.26
USP8-208ENST00000559329 ABCC2Q92887 1545 aa22.9■■□□□ 1.26
USP8-208ENST00000559329 TRIM52Q96A61 297 aa22.9■■□□□ 1.26
USP8-208ENST00000559329 CENPBP07199 599 aaPredicted RBP22.88■■□□□ 1.25
USP8-208ENST00000559329 PREX2Q70Z35 1606 aa22.87■■□□□ 1.25
USP8-208ENST00000559329 ARHGEF5Q12774 1597 aa22.85■■□□□ 1.25
USP8-208ENST00000559329 ZNF777Q9ULD5 760 aaPredicted RBP22.84■■□□□ 1.25
USP8-208ENST00000559329 SCAF1Q9H7N4 1312 aaKnown RBP22.84■■□□□ 1.25
USP8-208ENST00000559329 CDC42BPBQ9Y5S2 1711 aa22.83■■□□□ 1.25
USP8-208ENST00000559329 ANKRD30AQ9BXX3 1397 aa22.83■■□□□ 1.25
USP8-208ENST00000559329 ANKRD30BQ9BXX2 1392 aa22.82■■□□□ 1.24
USP8-208ENST00000559329 PZPP20742 1482 aa22.82■■□□□ 1.24
USP8-208ENST00000559329 MBD5Q9P267 1494 aa22.81■■□□□ 1.24
USP8-208ENST00000559329 C9orf84Q5VXU9 1444 aa22.8■■□□□ 1.24
USP8-208ENST00000559329 SAMD9LQ8IVG5 1584 aa22.8■■□□□ 1.24
USP8-208ENST00000559329 UHRF1BP1LA0JNW5 1464 aa22.8■■□□□ 1.24
USP8-208ENST00000559329 TTC37Q6PGP7 1564 aa22.79■■□□□ 1.24
USP8-208ENST00000559329 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.78■■□□□ 1.24
USP8-208ENST00000559329 RPRD2Q5VT52 1461 aaKnown RBP22.78■■□□□ 1.24
USP8-208ENST00000559329 ANKRD50Q9ULJ7 1429 aa22.76■■□□□ 1.23
USP8-208ENST00000559329 FOXD1Q16676 465 aa22.74■■□□□ 1.23
USP8-208ENST00000559329 ZCCHC11Q5TAX3 1644 aaKnown RBP22.74■■□□□ 1.23
USP8-208ENST00000559329 CCDC141Q6ZP82 1450 aa22.73■■□□□ 1.23
USP8-208ENST00000559329 SLC4A1APQ9BWU0 796 aaKnown RBP22.72■■□□□ 1.23
USP8-208ENST00000559329 TEX14Q8IWB6 1497 aa22.72■■□□□ 1.23
USP8-208ENST00000559329 KDM5DQ9BY66 1539 aa22.71■■□□□ 1.23
USP8-208ENST00000559329 MYO5CQ9NQX4 1742 aa22.71■■□□□ 1.23
USP8-208ENST00000559329 YTHDC1Q96MU7 727 aaKnown RBP22.7■■□□□ 1.23
USP8-208ENST00000559329 MAST1Q9Y2H9 1570 aa22.69■■□□□ 1.22
USP8-208ENST00000559329 KIAA1107Q9UPP5 1409 aa22.69■■□□□ 1.22
USP8-208ENST00000559329 HNRNPMP52272 730 aaKnown RBP eCLIP22.68■■□□□ 1.22
USP8-208ENST00000559329 TSPY4P0CV99 314 aa22.67■■□□□ 1.22
USP8-208ENST00000559329 TSPY10P0CW01 314 aa22.67■■□□□ 1.22
USP8-208ENST00000559329 ARHGAP5Q13017 1502 aa22.67■■□□□ 1.22
USP8-208ENST00000559329 SYCP2Q9BX26 1530 aa22.67■■□□□ 1.22
USP8-208ENST00000559329 RSPH4AQ5TD94 716 aa22.67■■□□□ 1.22
USP8-208ENST00000559329 L3MBTL2Q969R5 705 aa22.67■■□□□ 1.22
USP8-208ENST00000559329 KIF15Q9NS87 1388 aa22.66■■□□□ 1.22
USP8-208ENST00000559329 HIRIP3Q9BW71 556 aaPredicted RBP22.64■■□□□ 1.21
USP8-208ENST00000559329 DDX10Q13206 875 aaKnown RBP22.63■■□□□ 1.21
USP8-208ENST00000559329 PLEKHH2Q8IVE3 1493 aa22.63■■□□□ 1.21
USP8-208ENST00000559329 PLCH2O75038 1416 aa22.6■■□□□ 1.21
USP8-208ENST00000559329 PLXNC1O60486 1568 aa22.59■■□□□ 1.21
USP8-208ENST00000559329 NUP155O75694 1391 aa22.58■■□□□ 1.2
USP8-208ENST00000559329 PKD2Q13563 968 aa22.57■■□□□ 1.2
USP8-208ENST00000559329 ARHGEF12Q9NZN5 1544 aa22.57■■□□□ 1.2
USP8-208ENST00000559329 ARAP3Q8WWN8 1544 aa22.55■■□□□ 1.2
USP8-208ENST00000559329 ABCC1P33527 1531 aa22.54■■□□□ 1.2
USP8-208ENST00000559329 UNC13BO14795 1591 aa22.54■■□□□ 1.2
USP8-208ENST00000559329 NBPF8Q3BBV2 869 aa22.53■■□□□ 1.2
USP8-208ENST00000559329 GTF3C3Q9Y5Q9 886 aa22.53■■□□□ 1.2
USP8-208ENST00000559329 HSPA5P11021 654 aaKnown RBP22.53■■□□□ 1.2
USP8-208ENST00000559329 KCNH8Q96L42 1107 aa22.52■■□□□ 1.2
USP8-208ENST00000559329 FAM135AQ9P2D6 1515 aa22.5■■□□□ 1.19
USP8-208ENST00000559329 EIF4G2P78344 907 aaKnown RBP eCLIP22.49■■□□□ 1.19
USP8-208ENST00000559329 WDR7Q9Y4E6 1490 aa22.48■■□□□ 1.19
USP8-208ENST00000559329 EFCAB2Q5VUJ9 269 aa22.47■■□□□ 1.19
USP8-208ENST00000559329 SPATA31E1Q6ZUB1 1445 aa22.47■■□□□ 1.19
USP8-208ENST00000559329 DUOX2Q9NRD8 1548 aa22.47■■□□□ 1.19
USP8-208ENST00000559329 WASHC2AQ641Q2 1341 aa22.45■■□□□ 1.19
USP8-208ENST00000559329 MAGI2Q86UL8 1455 aa22.45■■□□□ 1.18
USP8-208ENST00000559329 IQGAP3Q86VI3 1631 aa22.43■■□□□ 1.18
USP8-208ENST00000559329 ABCA9Q8IUA7 1624 aa22.43■■□□□ 1.18
USP8-208ENST00000559329 UHRF1BP1Q6BDS2 1440 aa22.43■■□□□ 1.18
USP8-208ENST00000559329 ERBINQ96RT1 1412 aa22.43■■□□□ 1.18
USP8-208ENST00000559329 TRAPPC8Q9Y2L5 1435 aa22.42■■□□□ 1.18
USP8-208ENST00000559329 CCER2I3L3R5 266 aa22.41■■□□□ 1.18
USP8-208ENST00000559329 POLR1AO95602 1720 aaPredicted RBP22.4■■□□□ 1.18
USP8-208ENST00000559329 ANP32CO43423 234 aa22.39■■□□□ 1.18
USP8-208ENST00000559329 RTEL1-TNFRSF6BF6WH68 1400 aa22.37■■□□□ 1.17
USP8-208ENST00000559329 ZFYVE16Q7Z3T8 1539 aa22.37■■□□□ 1.17
USP8-208ENST00000559329 RALGAPBQ86X10 1494 aa22.36■■□□□ 1.17
USP8-208ENST00000559329 CCDC7Q96M83 1385 aa22.36■■□□□ 1.17
USP8-208ENST00000559329 OSCARQ8IYS5 282 aa22.35■■□□□ 1.17
USP8-208ENST00000559329 PLA2R1Q13018 1463 aa22.35■■□□□ 1.17
USP8-208ENST00000559329 ASXL2Q76L83 1435 aa22.34■■□□□ 1.17
USP8-208ENST00000559329 C11orf95C9JLR9 678 aaPredicted RBP22.34■■□□□ 1.17
USP8-208ENST00000559329 CNTLNQ9NXG0 1405 aa22.34■■□□□ 1.17
USP8-208ENST00000559329 FANCAO15360 1455 aa22.33■■□□□ 1.16
USP8-208ENST00000559329 KDM5CP41229 1560 aa22.33■■□□□ 1.16
USP8-208ENST00000559329 ATP10AO60312 1499 aa22.31■■□□□ 1.16
USP8-208ENST00000559329 INO80Q9ULG1 1556 aaPredicted RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms