RNA–Protein interactions for RNA: ENST00000559327.1

IGDCC4-204, Transcript of immunoglobulin superfamily DCC subclass member 4, humanhuman

TSL 1 (best)

Gene IGDCC4, Length 5,544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGDCC4-204ENST00000559327 FOXD1Q16676 465 aa25.44■■□□□ 1.66
IGDCC4-204ENST00000559327 SPAG9O60271 1321 aaKnown RBP25.44■■□□□ 1.66
IGDCC4-204ENST00000559327 ROCK2O75116 1388 aaKnown RBP25.44■■□□□ 1.66
IGDCC4-204ENST00000559327 KIF3BO15066 747 aa25.43■■□□□ 1.66
IGDCC4-204ENST00000559327 STK26Q9P289 416 aa25.43■■□□□ 1.66
IGDCC4-204ENST00000559327 HNRNPMP52272 730 aaKnown RBP eCLIP25.42■■□□□ 1.66
IGDCC4-204ENST00000559327 FRAT1Q92837 279 aaPredicted RBP25.41■■□□□ 1.66
IGDCC4-204ENST00000559327 EIF3AQ14152 1382 aaKnown RBP25.4■■□□□ 1.66
IGDCC4-204ENST00000559327 KTN1Q86UP2 1357 aaKnown RBP25.4■■□□□ 1.66
IGDCC4-204ENST00000559327 CCER2I3L3R5 266 aa25.39■■□□□ 1.65
IGDCC4-204ENST00000559327 NBR1Q14596 966 aa25.38■■□□□ 1.65
IGDCC4-204ENST00000559327 NCLP19338 710 aaKnown RBP25.38■■□□□ 1.65
IGDCC4-204ENST00000559327 PPP4R2Q9NY27 417 aa25.35■■□□□ 1.65
IGDCC4-204ENST00000559327 SOX12O15370 315 aa25.34■■□□□ 1.65
IGDCC4-204ENST00000559327 GOLGA6L22H0YM25 854 aa25.33■■□□□ 1.65
IGDCC4-204ENST00000559327 WASHC2CQ9Y4E1 1318 aa25.32■■□□□ 1.64
IGDCC4-204ENST00000559327 PTPRGP23470 1445 aa25.32■■□□□ 1.64
IGDCC4-204ENST00000559327 NPHP1O15259 732 aa25.32■■□□□ 1.64
IGDCC4-204ENST00000559327 OS9Q13438 667 aaPredicted RBP25.29■■□□□ 1.64
IGDCC4-204ENST00000559327 RTF1Q92541 710 aaKnown RBP25.29■■□□□ 1.64
IGDCC4-204ENST00000559327 ANP32EQ9BTT0 268 aa25.29■■□□□ 1.64
IGDCC4-204ENST00000559327 EID1Q9Y6B2 187 aa25.28■■□□□ 1.64
IGDCC4-204ENST00000559327 RALBP1Q15311 655 aa25.27■■□□□ 1.64
IGDCC4-204ENST00000559327 GAPVD1Q14C86 1478 aa25.25■■□□□ 1.63
IGDCC4-204ENST00000559327 FGD5Q6ZNL6 1462 aa25.25■■□□□ 1.63
IGDCC4-204ENST00000559327 CALD1Q05682 793 aaKnown RBP25.22■■□□□ 1.63
IGDCC4-204ENST00000559327 PAK3O75914 559 aaPredicted RBP25.21■■□□□ 1.63
IGDCC4-204ENST00000559327 RGS3P49796 1198 aa25.2■■□□□ 1.63
IGDCC4-204ENST00000559327 NCAPD3P42695 1498 aa25.2■■□□□ 1.63
IGDCC4-204ENST00000559327 OSCARQ8IYS5 282 aa25.2■■□□□ 1.62
IGDCC4-204ENST00000559327 TERF2IPQ9NYB0 399 aa25.19■■□□□ 1.62
IGDCC4-204ENST00000559327 RUSC2Q8N2Y8 1516 aa25.19■■□□□ 1.62
IGDCC4-204ENST00000559327 CDK11BP21127 795 aaKnown RBP25.19■■□□□ 1.62
IGDCC4-204ENST00000559327 L3MBTL2Q969R5 705 aa25.18■■□□□ 1.62
IGDCC4-204ENST00000559327 U2AF1L5P0DN76 240 aaPredicted RBP25.15■■□□□ 1.62
IGDCC4-204ENST00000559327 U2AF1Q01081 240 aaKnown RBP eCLIP25.15■■□□□ 1.62
IGDCC4-204ENST00000559327 UACAQ9BZF9 1416 aa25.14■■□□□ 1.62
IGDCC4-204ENST00000559327 IPO8O15397 1037 aaKnown RBP25.13■■□□□ 1.61
IGDCC4-204ENST00000559327 ZRSR1Q15695 479 aaKnown RBP25.13■■□□□ 1.61
IGDCC4-204ENST00000559327 CCDC144AA2RUR9 1427 aa25.13■■□□□ 1.61
IGDCC4-204ENST00000559327 IGF1RP08069 1367 aa25.13■■□□□ 1.61
IGDCC4-204ENST00000559327 CSB-PGBD3P0DP91 1061 aa25.12■■□□□ 1.61
IGDCC4-204ENST00000559327 GOLGA2Q08379 1002 aa25.12■■□□□ 1.61
IGDCC4-204ENST00000559327 RAD54L2Q9Y4B4 1467 aa25.1■■□□□ 1.61
IGDCC4-204ENST00000559327 CHMP4AQ9BY43 222 aa25.1■■□□□ 1.61
IGDCC4-204ENST00000559327 KCNJ4P48050 445 aa25.07■■□□□ 1.6
IGDCC4-204ENST00000559327 CFAP44Q96MT7 982 aa25.07■■□□□ 1.6
IGDCC4-204ENST00000559327 CYB5RLQ6IPT4 315 aa25.06■■□□□ 1.6
IGDCC4-204ENST00000559327 NUTM2DQ5VT03 806 aaPredicted RBP25.05■■□□□ 1.6
IGDCC4-204ENST00000559327 FGD1P98174 961 aa25.05■■□□□ 1.6
IGDCC4-204ENST00000559327 NGDNQ8NEJ9 315 aaKnown RBP25.04■■□□□ 1.6
IGDCC4-204ENST00000559327 B4GALNT3Q6L9W6 998 aa25.02■■□□□ 1.6
IGDCC4-204ENST00000559327 TRIM44Q96DX7 344 aaPredicted RBP25.01■■□□□ 1.59
IGDCC4-204ENST00000559327 VGFO15240 615 aaPredicted RBP25■■□□□ 1.59
IGDCC4-204ENST00000559327 HSP90AB1P08238 724 aaKnown RBP25■■□□□ 1.59
IGDCC4-204ENST00000559327 MYOM3Q5VTT5 1437 aa24.98■■□□□ 1.59
IGDCC4-204ENST00000559327 MCCP23508 829 aa24.98■■□□□ 1.59
IGDCC4-204ENST00000559327 NLRP13Q86W25 1043 aa24.97■■□□□ 1.59
IGDCC4-204ENST00000559327 TRAK1Q9UPV9 953 aa24.97■■□□□ 1.59
IGDCC4-204ENST00000559327 RCAN3Q9UKA8 241 aa24.96■■□□□ 1.59
IGDCC4-204ENST00000559327 CUX1P39880 1505 aa24.96■■□□□ 1.59
IGDCC4-204ENST00000559327 PHLDB1Q86UU1 1377 aa24.96■■□□□ 1.59
IGDCC4-204ENST00000559327 AQRO60306 1485 aaKnown RBP eCLIP24.95■■□□□ 1.58
IGDCC4-204ENST00000559327 LMOD3Q0VAK6 560 aa24.94■■□□□ 1.58
IGDCC4-204ENST00000559327 ERICH6BQ5W0A0 696 aa24.93■■□□□ 1.58
IGDCC4-204ENST00000559327 DHX57Q6P158 1386 aaKnown RBP24.93■■□□□ 1.58
IGDCC4-204ENST00000559327 STK31Q9BXU1 1019 aa24.93■■□□□ 1.58
IGDCC4-204ENST00000559327 KIF15Q9NS87 1388 aa24.93■■□□□ 1.58
IGDCC4-204ENST00000559327 GRIN2BQ13224 1484 aa24.92■■□□□ 1.58
IGDCC4-204ENST00000559327 AMPHP49418 695 aa24.92■■□□□ 1.58
IGDCC4-204ENST00000559327 HSCBQ8IWL3 235 aa24.9■■□□□ 1.58
IGDCC4-204ENST00000559327 ITPRIPQ8IWB1 547 aa24.9■■□□□ 1.58
IGDCC4-204ENST00000559327 RWDD1Q9H446 243 aaPredicted RBP24.9■■□□□ 1.58
IGDCC4-204ENST00000559327 NAP1L2Q9ULW6 460 aaPredicted RBP24.9■■□□□ 1.58
IGDCC4-204ENST00000559327 PTMAP06454 111 aaKnown RBP24.88■■□□□ 1.57
IGDCC4-204ENST00000559327 HDAC5Q9UQL6 1122 aa24.88■■□□□ 1.57
IGDCC4-204ENST00000559327 EVC2Q86UK5 1308 aa24.88■■□□□ 1.57
IGDCC4-204ENST00000559327 ST20-MTHFSA0A0A6YYL1 179 aa24.88■■□□□ 1.57
IGDCC4-204ENST00000559327 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.87■■□□□ 1.57
IGDCC4-204ENST00000559327 TPRNQ4KMQ1 711 aa24.86■■□□□ 1.57
IGDCC4-204ENST00000559327 PDE3BQ13370 1112 aa24.86■■□□□ 1.57
IGDCC4-204ENST00000559327 CCDC9Q9Y3X0 531 aaKnown RBP24.85■■□□□ 1.57
IGDCC4-204ENST00000559327 CFTRP13569 1480 aa24.85■■□□□ 1.57
IGDCC4-204ENST00000559327 FGD6Q6ZV73 1430 aa24.85■■□□□ 1.57
IGDCC4-204ENST00000559327 ZNF330Q9Y3S2 320 aaPredicted RBP24.84■■□□□ 1.57
IGDCC4-204ENST00000559327 PRDM2Q13029 1718 aa24.83■■□□□ 1.57
IGDCC4-204ENST00000559327 MYBBP1AQ9BQG0 1328 aaKnown RBP24.83■■□□□ 1.57
IGDCC4-204ENST00000559327 FAM69CQ0P6D2 419 aa24.83■■□□□ 1.57
IGDCC4-204ENST00000559327 NOP58Q9Y2X3 529 aaKnown RBP24.83■■□□□ 1.57
IGDCC4-204ENST00000559327 SMC4Q9NTJ3 1288 aa24.83■■□□□ 1.57
IGDCC4-204ENST00000559327 MRC2Q9UBG0 1479 aa24.82■■□□□ 1.56
IGDCC4-204ENST00000559327 TAOK2Q9UL54 1235 aa24.81■■□□□ 1.56
IGDCC4-204ENST00000559327 PMFBP1Q8TBY8 1022 aa24.81■■□□□ 1.56
IGDCC4-204ENST00000559327 PANK3Q9H999 370 aa24.81■■□□□ 1.56
IGDCC4-204ENST00000559327 CGNL1Q0VF96 1302 aa24.81■■□□□ 1.56
IGDCC4-204ENST00000559327 NUTM2FA1L443 756 aa24.81■■□□□ 1.56
IGDCC4-204ENST00000559327 CASKIN1Q8WXD9 1431 aa24.8■■□□□ 1.56
IGDCC4-204ENST00000559327 KIAA1211Q6ZU35 1233 aa24.8■■□□□ 1.56
IGDCC4-204ENST00000559327 APBB1O00213 710 aa24.8■■□□□ 1.56
IGDCC4-204ENST00000559327 CCDC146Q8IYE0 955 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms