RNA–Protein interactions for RNA: ENST00000559179.1

TRPM1-210, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPM1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-210ENST00000559179 YEATS2Q9ULM3 1422 aa20.34■□□□□ 0.85
TRPM1-210ENST00000559179 FMN1Q68DA7 1419 aa20.33■□□□□ 0.84
TRPM1-210ENST00000559179 LMTK3Q96Q04 1460 aa20.32■□□□□ 0.84
TRPM1-210ENST00000559179 PLCH2O75038 1416 aa20.32■□□□□ 0.84
TRPM1-210ENST00000559179 HECW1Q76N89 1606 aa20.31■□□□□ 0.84
TRPM1-210ENST00000559179 MAGI2Q86UL8 1455 aa20.31■□□□□ 0.84
TRPM1-210ENST00000559179 ZMYM4Q5VZL5 1548 aa20.31■□□□□ 0.84
TRPM1-210ENST00000559179 MYO5CQ9NQX4 1742 aa20.28■□□□□ 0.84
TRPM1-210ENST00000559179 FER1L4A9Z1Z3 1794 aa20.26■□□□□ 0.83
TRPM1-210ENST00000559179 CLIP1P30622 1438 aa20.26■□□□□ 0.83
TRPM1-210ENST00000559179 ATP10AO60312 1499 aa20.24■□□□□ 0.83
TRPM1-210ENST00000559179 ARHGAP35Q9NRY4 1499 aa20.24■□□□□ 0.83
TRPM1-210ENST00000559179 ARHGAP5Q13017 1502 aa20.23■□□□□ 0.83
TRPM1-210ENST00000559179 SIGLEC1Q9BZZ2 1709 aa20.23■□□□□ 0.83
TRPM1-210ENST00000559179 KIF14Q15058 1648 aa20.23■□□□□ 0.83
TRPM1-210ENST00000559179 C9orf84Q5VXU9 1444 aa20.22■□□□□ 0.83
TRPM1-210ENST00000559179 AFAP1Q8N556 730 aa20.21■□□□□ 0.83
TRPM1-210ENST00000559179 CEBPAP49715 358 aaPredicted RBP20.2■□□□□ 0.82
TRPM1-210ENST00000559179 CHIC1Q5VXU3 224 aa20.2■□□□□ 0.82
TRPM1-210ENST00000559179 ESF1Q9H501 851 aaKnown RBP20.2■□□□□ 0.82
TRPM1-210ENST00000559179 TROQ12816 1431 aaPredicted RBP20.19■□□□□ 0.82
TRPM1-210ENST00000559179 ZNF518AQ6AHZ1 1483 aa20.18■□□□□ 0.82
TRPM1-210ENST00000559179 CERKQ8TCT0 537 aa20.16■□□□□ 0.82
TRPM1-210ENST00000559179 ARHGEF12Q9NZN5 1544 aa20.13■□□□□ 0.81
TRPM1-210ENST00000559179 PREX1Q8TCU6 1659 aa20.11■□□□□ 0.81
TRPM1-210ENST00000559179 DMRT2Q9Y5R5 561 aa20.11■□□□□ 0.81
TRPM1-210ENST00000559179 ZNF777Q9ULD5 760 aaPredicted RBP20.1■□□□□ 0.81
TRPM1-210ENST00000559179 LRRIQ1Q96JM4 1722 aa20.1■□□□□ 0.81
TRPM1-210ENST00000559179 UHRF1BP1Q6BDS2 1440 aa20.08■□□□□ 0.8
TRPM1-210ENST00000559179 CDC42BPBQ9Y5S2 1711 aa20.07■□□□□ 0.8
TRPM1-210ENST00000559179 CCDC18Q5T9S5 1454 aa20.07■□□□□ 0.8
TRPM1-210ENST00000559179 KDM5CP41229 1560 aa20.07■□□□□ 0.8
TRPM1-210ENST00000559179 DIP2CQ9Y2E4 1556 aa20.05■□□□□ 0.8
TRPM1-210ENST00000559179 CASKIN1Q8WXD9 1431 aa20.05■□□□□ 0.8
TRPM1-210ENST00000559179 TRAPPC8Q9Y2L5 1435 aa20.03■□□□□ 0.8
TRPM1-210ENST00000559179 PREX2Q70Z35 1606 aa20.03■□□□□ 0.8
TRPM1-210ENST00000559179 MLH3Q9UHC1 1453 aa20.03■□□□□ 0.8
TRPM1-210ENST00000559179 ABCA6Q8N139 1617 aa20.02■□□□□ 0.8
TRPM1-210ENST00000559179 ABCC1P33527 1531 aa20.01■□□□□ 0.79
TRPM1-210ENST00000559179 ITSN2Q9NZM3 1697 aa20■□□□□ 0.79
TRPM1-210ENST00000559179 SETD1BQ9UPS6 1966 aaKnown RBP20■□□□□ 0.79
TRPM1-210ENST00000559179 C3P01024 1663 aa19.98■□□□□ 0.79
TRPM1-210ENST00000559179 REREQ9P2R6 1566 aa19.98■□□□□ 0.79
TRPM1-210ENST00000559179 CDC42BPAQ5VT25 1732 aa19.97■□□□□ 0.79
TRPM1-210ENST00000559179 HNRNPMP52272 730 aaKnown RBP eCLIP19.97■□□□□ 0.79
TRPM1-210ENST00000559179 SPAG9O60271 1321 aaKnown RBP19.97■□□□□ 0.79
TRPM1-210ENST00000559179 STRCQ7RTU9 1775 aa19.95■□□□□ 0.78
TRPM1-210ENST00000559179 FYCO1Q9BQS8 1478 aa19.95■□□□□ 0.78
TRPM1-210ENST00000559179 AGLP35573 1532 aa19.95■□□□□ 0.78
TRPM1-210ENST00000559179 KIDINS220Q9ULH0 1771 aa19.94■□□□□ 0.78
TRPM1-210ENST00000559179 CFDP1Q9UEE9 299 aaPredicted RBP19.94■□□□□ 0.78
TRPM1-210ENST00000559179 CNTLNQ9NXG0 1405 aa19.93■□□□□ 0.78
TRPM1-210ENST00000559179 CCNB3Q8WWL7 1395 aa19.91■□□□□ 0.78
TRPM1-210ENST00000559179 SUPT6HQ7KZ85 1726 aaKnown RBP19.9■□□□□ 0.78
TRPM1-210ENST00000559179 SYCP2Q9BX26 1530 aa19.9■□□□□ 0.78
TRPM1-210ENST00000559179 SAMD9LQ8IVG5 1584 aa19.9■□□□□ 0.78
TRPM1-210ENST00000559179 GGT6Q6P531 493 aa19.89■□□□□ 0.77
TRPM1-210ENST00000559179 GPATCH8Q9UKJ3 1502 aaKnown RBP19.88■□□□□ 0.77
TRPM1-210ENST00000559179 PTPRTO14522 1441 aa19.88■□□□□ 0.77
TRPM1-210ENST00000559179 MTUS2Q5JR59 1369 aa19.88■□□□□ 0.77
TRPM1-210ENST00000559179 DISP3Q9P2K9 1392 aa19.87■□□□□ 0.77
TRPM1-210ENST00000559179 ZMYM3Q14202 1370 aa19.86■□□□□ 0.77
TRPM1-210ENST00000559179 PLEKHH2Q8IVE3 1493 aa19.86■□□□□ 0.77
TRPM1-210ENST00000559179 ATP7AQ04656 1500 aa19.83■□□□□ 0.77
TRPM1-210ENST00000559179 NCKAP5LQ9HCH0 1330 aa19.82■□□□□ 0.76
TRPM1-210ENST00000559179 CLTCQ00610 1675 aaKnown RBP19.82■□□□□ 0.76
TRPM1-210ENST00000559179 A2MP01023 1474 aa19.82■□□□□ 0.76
TRPM1-210ENST00000559179 CAMSAP1Q5T5Y3 1602 aa19.82■□□□□ 0.76
TRPM1-210ENST00000559179 MROH2AA6NES4 1674 aa19.81■□□□□ 0.76
TRPM1-210ENST00000559179 NPATQ14207 1427 aa19.81■□□□□ 0.76
TRPM1-210ENST00000559179 NCOA1Q15788 1441 aa19.81■□□□□ 0.76
TRPM1-210ENST00000559179 KIAA1107Q9UPP5 1409 aa19.81■□□□□ 0.76
TRPM1-210ENST00000559179 ZNF644Q9H582 1327 aaPredicted RBP19.77■□□□□ 0.76
TRPM1-210ENST00000559179 INO80Q9ULG1 1556 aaPredicted RBP19.75■□□□□ 0.75
TRPM1-210ENST00000559179 PKD2Q13563 968 aa19.74■□□□□ 0.75
TRPM1-210ENST00000559179 ADGBQ8N7X0 1667 aa19.74■□□□□ 0.75
TRPM1-210ENST00000559179 LTBP4Q8N2S1 1624 aa19.73■□□□□ 0.75
TRPM1-210ENST00000559179 PPP6R1Q9UPN7 881 aa19.73■□□□□ 0.75
TRPM1-210ENST00000559179 ZNF335Q9H4Z2 1342 aaPredicted RBP19.73■□□□□ 0.75
TRPM1-210ENST00000559179 UBAP1LF5GYI3 381 aa19.72■□□□□ 0.75
TRPM1-210ENST00000559179 MYO3AQ8NEV4 1616 aa19.72■□□□□ 0.75
TRPM1-210ENST00000559179 PLXNC1O60486 1568 aa19.71■□□□□ 0.75
TRPM1-210ENST00000559179 ILDR2Q71H61 639 aa19.71■□□□□ 0.75
TRPM1-210ENST00000559179 EHBP1L1Q8N3D4 1523 aa19.71■□□□□ 0.75
TRPM1-210ENST00000559179 PTPRKQ15262 1439 aa19.7■□□□□ 0.74
TRPM1-210ENST00000559179 KIF3BO15066 747 aa19.7■□□□□ 0.74
TRPM1-210ENST00000559179 IQSEC2Q5JU85 1478 aa19.7■□□□□ 0.74
TRPM1-210ENST00000559179 TIAM1Q13009 1591 aa19.7■□□□□ 0.74
TRPM1-210ENST00000559179 CEP170BQ9Y4F5 1589 aaPredicted RBP19.69■□□□□ 0.74
TRPM1-210ENST00000559179 SPATA31D1Q6ZQQ2 1576 aa19.67■□□□□ 0.74
TRPM1-210ENST00000559179 ZNF142P52746 1687 aaPredicted RBP19.66■□□□□ 0.74
TRPM1-210ENST00000559179 SCAF1Q9H7N4 1312 aaKnown RBP19.66■□□□□ 0.74
TRPM1-210ENST00000559179 DHX29Q7Z478 1369 aaKnown RBP19.66■□□□□ 0.74
TRPM1-210ENST00000559179 PLA2R1Q13018 1463 aa19.66■□□□□ 0.74
TRPM1-210ENST00000559179 SOCS7O14512 581 aa19.65■□□□□ 0.74
TRPM1-210ENST00000559179 WASHC2CQ9Y4E1 1318 aa19.65■□□□□ 0.74
TRPM1-210ENST00000559179 RTEL1-TNFRSF6BF6WH68 1400 aa19.65■□□□□ 0.74
TRPM1-210ENST00000559179 TSPY4P0CV99 314 aa19.64■□□□□ 0.73
TRPM1-210ENST00000559179 TSPY10P0CW01 314 aa19.64■□□□□ 0.73
TRPM1-210ENST00000559179 RSPH4AQ5TD94 716 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms