RNA–Protein interactions for RNA: ENST00000558999.5

AP3S2-208, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 5

Gene AP3S2, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-208ENST00000558999 PLEKHD1A6NEE1 506 aa13.38□□□□□ -0.27
AP3S2-208ENST00000558999 NUP153P49790 1475 aaKnown RBP13.37□□□□□ -0.27
AP3S2-208ENST00000558999 YEATS2Q9ULM3 1422 aa13.37□□□□□ -0.27
AP3S2-208ENST00000558999 STRCQ7RTU9 1775 aa13.35□□□□□ -0.27
AP3S2-208ENST00000558999 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.35□□□□□ -0.27
AP3S2-208ENST00000558999 MLECQ14165 292 aa13.35□□□□□ -0.27
AP3S2-208ENST00000558999 HECW1Q76N89 1606 aa13.35□□□□□ -0.27
AP3S2-208ENST00000558999 ARHGEF12Q9NZN5 1544 aa13.34□□□□□ -0.27
AP3S2-208ENST00000558999 SPATA31D1Q6ZQQ2 1576 aa13.33□□□□□ -0.28
AP3S2-208ENST00000558999 ATP10AO60312 1499 aa13.31□□□□□ -0.28
AP3S2-208ENST00000558999 SCAPERQ9BY12 1400 aa13.3□□□□□ -0.28
AP3S2-208ENST00000558999 PTPRTO14522 1441 aa13.29□□□□□ -0.28
AP3S2-208ENST00000558999 C9orf84Q5VXU9 1444 aa13.29□□□□□ -0.28
AP3S2-208ENST00000558999 UHRF1BP1Q6BDS2 1440 aa13.29□□□□□ -0.28
AP3S2-208ENST00000558999 CEBPAP49715 358 aaPredicted RBP13.28□□□□□ -0.28
AP3S2-208ENST00000558999 PLCH2O75038 1416 aa13.28□□□□□ -0.28
AP3S2-208ENST00000558999 IQSEC2Q5JU85 1478 aa13.27□□□□□ -0.29
AP3S2-208ENST00000558999 CSRNP3Q8WYN3 585 aa13.26□□□□□ -0.29
AP3S2-208ENST00000558999 LTBP4Q8N2S1 1624 aa13.24□□□□□ -0.29
AP3S2-208ENST00000558999 MYO5CQ9NQX4 1742 aa13.23□□□□□ -0.29
AP3S2-208ENST00000558999 EFCAB2Q5VUJ9 269 aa13.23□□□□□ -0.29
AP3S2-208ENST00000558999 C3P01024 1663 aa13.21□□□□□ -0.29
AP3S2-208ENST00000558999 ZNF518AQ6AHZ1 1483 aa13.21□□□□□ -0.3
AP3S2-208ENST00000558999 REREQ9P2R6 1566 aa13.2□□□□□ -0.3
AP3S2-208ENST00000558999 RANGAP1P46060 587 aaPredicted RBP13.19□□□□□ -0.3
AP3S2-208ENST00000558999 KDM5CP41229 1560 aa13.19□□□□□ -0.3
AP3S2-208ENST00000558999 TRAPPC8Q9Y2L5 1435 aa13.18□□□□□ -0.3
AP3S2-208ENST00000558999 CDK13Q14004 1512 aaKnown RBP13.18□□□□□ -0.3
AP3S2-208ENST00000558999 DIP2CQ9Y2E4 1556 aa13.16□□□□□ -0.3
AP3S2-208ENST00000558999 NCOA1Q15788 1441 aa13.16□□□□□ -0.3
AP3S2-208ENST00000558999 AFAP1Q8N556 730 aa13.16□□□□□ -0.3
AP3S2-208ENST00000558999 ESF1Q9H501 851 aaKnown RBP13.16□□□□□ -0.3
AP3S2-208ENST00000558999 AGLP35573 1532 aa13.16□□□□□ -0.3
AP3S2-208ENST00000558999 CDK11AQ9UQ88 783 aaPredicted RBP13.15□□□□□ -0.3
AP3S2-208ENST00000558999 EEA1Q15075 1411 aa13.14□□□□□ -0.31
AP3S2-208ENST00000558999 MYT1LQ9UL68 1186 aa13.14□□□□□ -0.31
AP3S2-208ENST00000558999 MLH3Q9UHC1 1453 aa13.14□□□□□ -0.31
AP3S2-208ENST00000558999 CNTLNQ9NXG0 1405 aa13.13□□□□□ -0.31
AP3S2-208ENST00000558999 KIF14Q15058 1648 aa13.12□□□□□ -0.31
AP3S2-208ENST00000558999 ABCA6Q8N139 1617 aa13.12□□□□□ -0.31
AP3S2-208ENST00000558999 ARHGAP5Q13017 1502 aa13.12□□□□□ -0.31
AP3S2-208ENST00000558999 CAMSAP1Q5T5Y3 1602 aa13.1□□□□□ -0.31
AP3S2-208ENST00000558999 MROH2AA6NES4 1674 aa13.1□□□□□ -0.31
AP3S2-208ENST00000558999 UBAP1LF5GYI3 381 aa13.1□□□□□ -0.31
AP3S2-208ENST00000558999 NPATQ14207 1427 aa13.1□□□□□ -0.31
AP3S2-208ENST00000558999 CDC42BPBQ9Y5S2 1711 aa13.1□□□□□ -0.31
AP3S2-208ENST00000558999 TROQ12816 1431 aaPredicted RBP13.09□□□□□ -0.31
AP3S2-208ENST00000558999 FMN1Q68DA7 1419 aa13.09□□□□□ -0.31
AP3S2-208ENST00000558999 CLIP1P30622 1438 aa13.07□□□□□ -0.32
AP3S2-208ENST00000558999 ATP1B4Q9UN42 357 aaPredicted RBP13.07□□□□□ -0.32
AP3S2-208ENST00000558999 KIDINS220Q9ULH0 1771 aa13.07□□□□□ -0.32
AP3S2-208ENST00000558999 SUPT6HQ7KZ85 1726 aaKnown RBP13.06□□□□□ -0.32
AP3S2-208ENST00000558999 PKD2Q13563 968 aa13.06□□□□□ -0.32
AP3S2-208ENST00000558999 ZNF335Q9H4Z2 1342 aaPredicted RBP13.06□□□□□ -0.32
AP3S2-208ENST00000558999 ITSN2Q9NZM3 1697 aa13.05□□□□□ -0.32
AP3S2-208ENST00000558999 NCKAP5LQ9HCH0 1330 aa13.05□□□□□ -0.32
AP3S2-208ENST00000558999 ZMYM3Q14202 1370 aa13.05□□□□□ -0.32
AP3S2-208ENST00000558999 PLA2R1Q13018 1463 aa13.04□□□□□ -0.32
AP3S2-208ENST00000558999 ABCC1P33527 1531 aa13.04□□□□□ -0.32
AP3S2-208ENST00000558999 PREX2Q70Z35 1606 aa13.04□□□□□ -0.32
AP3S2-208ENST00000558999 ZNF142P52746 1687 aaPredicted RBP13.04□□□□□ -0.32
AP3S2-208ENST00000558999 TCOF1Q13428 1488 aaKnown RBP13.02□□□□□ -0.33
AP3S2-208ENST00000558999 LRRIQ1Q96JM4 1722 aa13.02□□□□□ -0.33
AP3S2-208ENST00000558999 MED1Q15648 1581 aaPredicted RBP13.01□□□□□ -0.33
AP3S2-208ENST00000558999 MYO3AQ8NEV4 1616 aa13□□□□□ -0.33
AP3S2-208ENST00000558999 CEP170BQ9Y4F5 1589 aaPredicted RBP12.99□□□□□ -0.33
AP3S2-208ENST00000558999 ARHGAP35Q9NRY4 1499 aa12.99□□□□□ -0.33
AP3S2-208ENST00000558999 CDC42BPAQ5VT25 1732 aa12.99□□□□□ -0.33
AP3S2-208ENST00000558999 CLTCQ00610 1675 aaKnown RBP12.99□□□□□ -0.33
AP3S2-208ENST00000558999 TOM1O60784 492 aa12.98□□□□□ -0.33
AP3S2-208ENST00000558999 HSPA1LP34931 641 aa12.98□□□□□ -0.33
AP3S2-208ENST00000558999 PPP6R1Q9UPN7 881 aa12.98□□□□□ -0.33
AP3S2-208ENST00000558999 SAMD9LQ8IVG5 1584 aa12.98□□□□□ -0.33
AP3S2-208ENST00000558999 PTPRKQ15262 1439 aa12.96□□□□□ -0.33
AP3S2-208ENST00000558999 CPS1P31327 1500 aa12.95□□□□□ -0.34
AP3S2-208ENST00000558999 UBTFP17480 764 aaKnown RBP12.95□□□□□ -0.34
AP3S2-208ENST00000558999 SPAG9O60271 1321 aaKnown RBP12.94□□□□□ -0.34
AP3S2-208ENST00000558999 SCAF1Q9H7N4 1312 aaKnown RBP12.93□□□□□ -0.34
AP3S2-208ENST00000558999 CCDC18Q5T9S5 1454 aa12.93□□□□□ -0.34
AP3S2-208ENST00000558999 PIP4K2BP78356 416 aa12.93□□□□□ -0.34
AP3S2-208ENST00000558999 PLXNC1O60486 1568 aa12.93□□□□□ -0.34
AP3S2-208ENST00000558999 POLR1AO95602 1720 aaPredicted RBP12.93□□□□□ -0.34
AP3S2-208ENST00000558999 A2ML1A8K2U0 1454 aa12.92□□□□□ -0.34
AP3S2-208ENST00000558999 DNMT1P26358 1616 aaKnown RBP12.92□□□□□ -0.34
AP3S2-208ENST00000558999 ATP7AQ04656 1500 aa12.92□□□□□ -0.34
AP3S2-208ENST00000558999 A2MP01023 1474 aa12.91□□□□□ -0.34
AP3S2-208ENST00000558999 SHANK2Q9UPX8 1470 aa12.91□□□□□ -0.34
AP3S2-208ENST00000558999 CASKIN1Q8WXD9 1431 aa12.9□□□□□ -0.34
AP3S2-208ENST00000558999 KIAA1107Q9UPP5 1409 aa12.9□□□□□ -0.34
AP3S2-208ENST00000558999 SYCP2Q9BX26 1530 aa12.9□□□□□ -0.34
AP3S2-208ENST00000558999 GGT6Q6P531 493 aa12.9□□□□□ -0.34
AP3S2-208ENST00000558999 ZNF777Q9ULD5 760 aaPredicted RBP12.9□□□□□ -0.34
AP3S2-208ENST00000558999 INO80Q9ULG1 1556 aaPredicted RBP12.9□□□□□ -0.35
AP3S2-208ENST00000558999 HNRNPMP52272 730 aaKnown RBP eCLIP12.89□□□□□ -0.35
AP3S2-208ENST00000558999 PLEKHH2Q8IVE3 1493 aa12.89□□□□□ -0.35
AP3S2-208ENST00000558999 ADGBQ8N7X0 1667 aa12.89□□□□□ -0.35
AP3S2-208ENST00000558999 NEURL4Q96JN8 1562 aa12.88□□□□□ -0.35
AP3S2-208ENST00000558999 GPATCH8Q9UKJ3 1502 aaKnown RBP12.88□□□□□ -0.35
AP3S2-208ENST00000558999 ANKLE2Q86XL3 938 aa12.85□□□□□ -0.35
AP3S2-208ENST00000558999 VWDEQ8N2E2 1590 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms