RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 PLCH2O75038 1416 aa18.94■□□□□ 0.62
CASC4-205ENST00000558735 ARHGAP35Q9NRY4 1499 aa18.94■□□□□ 0.62
CASC4-205ENST00000558735 HECW1Q76N89 1606 aa18.93■□□□□ 0.62
CASC4-205ENST00000558735 SCAPERQ9BY12 1400 aa18.91■□□□□ 0.62
CASC4-205ENST00000558735 ARHGEF12Q9NZN5 1544 aa18.91■□□□□ 0.62
CASC4-205ENST00000558735 FMN1Q68DA7 1419 aa18.91■□□□□ 0.62
CASC4-205ENST00000558735 ATP10AO60312 1499 aa18.9■□□□□ 0.62
CASC4-205ENST00000558735 CDK13Q14004 1512 aaKnown RBP18.9■□□□□ 0.62
CASC4-205ENST00000558735 FER1L4A9Z1Z3 1794 aa18.88■□□□□ 0.61
CASC4-205ENST00000558735 C9orf84Q5VXU9 1444 aa18.87■□□□□ 0.61
CASC4-205ENST00000558735 CDK11AQ9UQ88 783 aaPredicted RBP18.86■□□□□ 0.61
CASC4-205ENST00000558735 MLECQ14165 292 aa18.85■□□□□ 0.61
CASC4-205ENST00000558735 EFCAB2Q5VUJ9 269 aa18.84■□□□□ 0.61
CASC4-205ENST00000558735 PLPPR3Q6T4P5 718 aa18.84■□□□□ 0.61
CASC4-205ENST00000558735 PREX1Q8TCU6 1659 aa18.83■□□□□ 0.61
CASC4-205ENST00000558735 DMRT2Q9Y5R5 561 aa18.83■□□□□ 0.6
CASC4-205ENST00000558735 ZNF518AQ6AHZ1 1483 aa18.81■□□□□ 0.6
CASC4-205ENST00000558735 KDM5CP41229 1560 aa18.79■□□□□ 0.6
CASC4-205ENST00000558735 REREQ9P2R6 1566 aa18.77■□□□□ 0.6
CASC4-205ENST00000558735 CEBPAP49715 358 aaPredicted RBP18.77■□□□□ 0.6
CASC4-205ENST00000558735 STRCQ7RTU9 1775 aa18.77■□□□□ 0.6
CASC4-205ENST00000558735 MYO5CQ9NQX4 1742 aa18.77■□□□□ 0.59
CASC4-205ENST00000558735 TROQ12816 1431 aaPredicted RBP18.75■□□□□ 0.59
CASC4-205ENST00000558735 UHRF1BP1Q6BDS2 1440 aa18.75■□□□□ 0.59
CASC4-205ENST00000558735 SETD1BQ9UPS6 1966 aaKnown RBP18.75■□□□□ 0.59
CASC4-205ENST00000558735 PTPRTO14522 1441 aa18.74■□□□□ 0.59
CASC4-205ENST00000558735 AFAP1Q8N556 730 aa18.74■□□□□ 0.59
CASC4-205ENST00000558735 CASKIN1Q8WXD9 1431 aa18.73■□□□□ 0.59
CASC4-205ENST00000558735 MLH3Q9UHC1 1453 aa18.72■□□□□ 0.59
CASC4-205ENST00000558735 DIP2CQ9Y2E4 1556 aa18.72■□□□□ 0.59
CASC4-205ENST00000558735 KIF14Q15058 1648 aa18.71■□□□□ 0.59
CASC4-205ENST00000558735 AGLP35573 1532 aa18.71■□□□□ 0.59
CASC4-205ENST00000558735 SOCS7O14512 581 aa18.7■□□□□ 0.58
CASC4-205ENST00000558735 ARHGAP5Q13017 1502 aa18.69■□□□□ 0.58
CASC4-205ENST00000558735 DISP3Q9P2K9 1392 aa18.69■□□□□ 0.58
CASC4-205ENST00000558735 CLIP1P30622 1438 aa18.69■□□□□ 0.58
CASC4-205ENST00000558735 ILDR2Q71H61 639 aa18.69■□□□□ 0.58
CASC4-205ENST00000558735 LRRIQ1Q96JM4 1722 aa18.69■□□□□ 0.58
CASC4-205ENST00000558735 TRAPPC8Q9Y2L5 1435 aa18.66■□□□□ 0.58
CASC4-205ENST00000558735 IQSEC2Q5JU85 1478 aa18.66■□□□□ 0.58
CASC4-205ENST00000558735 ABCA6Q8N139 1617 aa18.65■□□□□ 0.58
CASC4-205ENST00000558735 LTBP4Q8N2S1 1624 aa18.64■□□□□ 0.57
CASC4-205ENST00000558735 C3P01024 1663 aa18.64■□□□□ 0.57
CASC4-205ENST00000558735 CNTLNQ9NXG0 1405 aa18.64■□□□□ 0.57
CASC4-205ENST00000558735 CCDC18Q5T9S5 1454 aa18.64■□□□□ 0.57
CASC4-205ENST00000558735 NCOA1Q15788 1441 aa18.62■□□□□ 0.57
CASC4-205ENST00000558735 ABCC1P33527 1531 aa18.62■□□□□ 0.57
CASC4-205ENST00000558735 CDC42BPBQ9Y5S2 1711 aa18.62■□□□□ 0.57
CASC4-205ENST00000558735 FYCO1Q9BQS8 1478 aa18.6■□□□□ 0.57
CASC4-205ENST00000558735 PREX2Q70Z35 1606 aa18.6■□□□□ 0.57
CASC4-205ENST00000558735 NPATQ14207 1427 aa18.59■□□□□ 0.57
CASC4-205ENST00000558735 ESF1Q9H501 851 aaKnown RBP18.59■□□□□ 0.57
CASC4-205ENST00000558735 MYT1LQ9UL68 1186 aa18.59■□□□□ 0.57
CASC4-205ENST00000558735 SPATA31D1Q6ZQQ2 1576 aa18.56■□□□□ 0.56
CASC4-205ENST00000558735 KIDINS220Q9ULH0 1771 aa18.56■□□□□ 0.56
CASC4-205ENST00000558735 ITSN2Q9NZM3 1697 aa18.56■□□□□ 0.56
CASC4-205ENST00000558735 ZNF777Q9ULD5 760 aaPredicted RBP18.55■□□□□ 0.56
CASC4-205ENST00000558735 MROH2AA6NES4 1674 aa18.54■□□□□ 0.56
CASC4-205ENST00000558735 HNRNPMP52272 730 aaKnown RBP eCLIP18.52■□□□□ 0.56
CASC4-205ENST00000558735 GPATCH8Q9UKJ3 1502 aaKnown RBP18.52■□□□□ 0.56
CASC4-205ENST00000558735 LOC105371045A0A1W2PR82 267 aa18.51■□□□□ 0.55
CASC4-205ENST00000558735 ZMYM3Q14202 1370 aa18.51■□□□□ 0.55
CASC4-205ENST00000558735 SAMD9LQ8IVG5 1584 aa18.51■□□□□ 0.55
CASC4-205ENST00000558735 CAMSAP1Q5T5Y3 1602 aa18.5■□□□□ 0.55
CASC4-205ENST00000558735 CFDP1Q9UEE9 299 aaPredicted RBP18.5■□□□□ 0.55
CASC4-205ENST00000558735 CDC42BPAQ5VT25 1732 aa18.49■□□□□ 0.55
CASC4-205ENST00000558735 PLA2R1Q13018 1463 aa18.48■□□□□ 0.55
CASC4-205ENST00000558735 MTUS2Q5JR59 1369 aa18.48■□□□□ 0.55
CASC4-205ENST00000558735 CEP162Q5TB80 1403 aa18.48■□□□□ 0.55
CASC4-205ENST00000558735 KIAA1107Q9UPP5 1409 aa18.47■□□□□ 0.55
CASC4-205ENST00000558735 CCNB3Q8WWL7 1395 aa18.46■□□□□ 0.55
CASC4-205ENST00000558735 PKD2Q13563 968 aa18.46■□□□□ 0.55
CASC4-205ENST00000558735 SPAG9O60271 1321 aaKnown RBP18.46■□□□□ 0.55
CASC4-205ENST00000558735 PLXNC1O60486 1568 aa18.45■□□□□ 0.54
CASC4-205ENST00000558735 TCOF1Q13428 1488 aaKnown RBP18.45■□□□□ 0.54
CASC4-205ENST00000558735 PPP6R1Q9UPN7 881 aa18.44■□□□□ 0.54
CASC4-205ENST00000558735 ZNF644Q9H582 1327 aaPredicted RBP18.44■□□□□ 0.54
CASC4-205ENST00000558735 NCKAP5LQ9HCH0 1330 aa18.44■□□□□ 0.54
CASC4-205ENST00000558735 ZNF142P52746 1687 aaPredicted RBP18.44■□□□□ 0.54
CASC4-205ENST00000558735 PTPRKQ15262 1439 aa18.43■□□□□ 0.54
CASC4-205ENST00000558735 ZNF335Q9H4Z2 1342 aaPredicted RBP18.43■□□□□ 0.54
CASC4-205ENST00000558735 SYCP2Q9BX26 1530 aa18.43■□□□□ 0.54
CASC4-205ENST00000558735 PLEKHH2Q8IVE3 1493 aa18.42■□□□□ 0.54
CASC4-205ENST00000558735 A2MP01023 1474 aa18.41■□□□□ 0.54
CASC4-205ENST00000558735 ATP7AQ04656 1500 aa18.41■□□□□ 0.54
CASC4-205ENST00000558735 INO80Q9ULG1 1556 aaPredicted RBP18.41■□□□□ 0.54
CASC4-205ENST00000558735 MYO3AQ8NEV4 1616 aa18.4■□□□□ 0.54
CASC4-205ENST00000558735 CEP170BQ9Y4F5 1589 aaPredicted RBP18.39■□□□□ 0.53
CASC4-205ENST00000558735 UBAP1LF5GYI3 381 aa18.39■□□□□ 0.53
CASC4-205ENST00000558735 CLTCQ00610 1675 aaKnown RBP18.38■□□□□ 0.53
CASC4-205ENST00000558735 SUPT6HQ7KZ85 1726 aaKnown RBP18.37■□□□□ 0.53
CASC4-205ENST00000558735 A2ML1A8K2U0 1454 aa18.33■□□□□ 0.53
CASC4-205ENST00000558735 MBD5Q9P267 1494 aa18.33■□□□□ 0.53
CASC4-205ENST00000558735 EHBP1L1Q8N3D4 1523 aa18.33■□□□□ 0.52
CASC4-205ENST00000558735 GGT6Q6P531 493 aa18.32■□□□□ 0.52
CASC4-205ENST00000558735 TIAM1Q13009 1591 aa18.32■□□□□ 0.52
CASC4-205ENST00000558735 ADGBQ8N7X0 1667 aa18.31■□□□□ 0.52
CASC4-205ENST00000558735 RTEL1-TNFRSF6BF6WH68 1400 aa18.31■□□□□ 0.52
CASC4-205ENST00000558735 DNMT1P26358 1616 aaKnown RBP18.3■□□□□ 0.52
CASC4-205ENST00000558735 NCOA2Q15596 1464 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms