RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 CARMIL1Q5VZK9 1371 aa21.54■■□□□ 1.04
HMBOX1-212ENST00000558662 MIA2Q96PC5 1412 aa21.53■■□□□ 1.04
HMBOX1-212ENST00000558662 THOC2Q8NI27 1593 aaKnown RBP21.53■■□□□ 1.04
HMBOX1-212ENST00000558662 SPATA31E1Q6ZUB1 1445 aa21.51■■□□□ 1.03
HMBOX1-212ENST00000558662 NESP48681 1621 aa21.51■■□□□ 1.03
HMBOX1-212ENST00000558662 LAS1LQ9Y4W2 734 aaKnown RBP21.5■■□□□ 1.03
HMBOX1-212ENST00000558662 KTN1Q86UP2 1357 aaKnown RBP21.49■■□□□ 1.03
HMBOX1-212ENST00000558662 MYOM3Q5VTT5 1437 aa21.49■■□□□ 1.03
HMBOX1-212ENST00000558662 PTPRKQ15262 1439 aa21.47■■□□□ 1.03
HMBOX1-212ENST00000558662 FANCD2Q9BXW9 1451 aa21.47■■□□□ 1.03
HMBOX1-212ENST00000558662 SUPT6HQ7KZ85 1726 aaKnown RBP21.47■■□□□ 1.03
HMBOX1-212ENST00000558662 BRPF3Q9ULD4 1205 aa21.47■■□□□ 1.03
HMBOX1-212ENST00000558662 EIF5BO60841 1220 aaKnown RBP21.46■■□□□ 1.03
HMBOX1-212ENST00000558662 RRP1P56182 461 aaKnown RBP21.44■■□□□ 1.02
HMBOX1-212ENST00000558662 NFKBIBQ15653 356 aa21.44■■□□□ 1.02
HMBOX1-212ENST00000558662 PKNOX2Q96KN3 472 aa21.43■■□□□ 1.02
HMBOX1-212ENST00000558662 KIF7Q2M1P5 1343 aa21.43■■□□□ 1.02
HMBOX1-212ENST00000558662 ROCK2O75116 1388 aaKnown RBP21.43■■□□□ 1.02
HMBOX1-212ENST00000558662 TCOF1Q13428 1488 aaKnown RBP21.43■■□□□ 1.02
HMBOX1-212ENST00000558662 DHX29Q7Z478 1369 aaKnown RBP21.43■■□□□ 1.02
HMBOX1-212ENST00000558662 PDE3BQ13370 1112 aa21.43■■□□□ 1.02
HMBOX1-212ENST00000558662 EHBP1L1Q8N3D4 1523 aa21.42■■□□□ 1.02
HMBOX1-212ENST00000558662 NPM2Q86SE8 214 aaKnown RBP21.42■■□□□ 1.02
HMBOX1-212ENST00000558662 RPRD2Q5VT52 1461 aaKnown RBP21.41■■□□□ 1.02
HMBOX1-212ENST00000558662 LRPPRCP42704 1394 aaKnown RBP21.4■■□□□ 1.02
HMBOX1-212ENST00000558662 CTTNBP2Q8WZ74 1663 aa21.4■■□□□ 1.02
HMBOX1-212ENST00000558662 DENND4BO75064 1496 aaPredicted RBP21.39■■□□□ 1.01
HMBOX1-212ENST00000558662 MTUS2Q5JR59 1369 aa21.39■■□□□ 1.01
HMBOX1-212ENST00000558662 DAXXQ9UER7 740 aaPredicted RBP21.38■■□□□ 1.01
HMBOX1-212ENST00000558662 SNAPC4Q5SXM2 1469 aa21.38■■□□□ 1.01
HMBOX1-212ENST00000558662 FRAT1Q92837 279 aaPredicted RBP21.38■■□□□ 1.01
HMBOX1-212ENST00000558662 INSRP06213 1382 aa21.37■■□□□ 1.01
HMBOX1-212ENST00000558662 TEX14Q8IWB6 1497 aa21.37■■□□□ 1.01
HMBOX1-212ENST00000558662 ARHGEF11O15085 1522 aa21.37■■□□□ 1.01
HMBOX1-212ENST00000558662 ZMYM4Q5VZL5 1548 aa21.36■■□□□ 1.01
HMBOX1-212ENST00000558662 PNISRQ8TF01 805 aaKnown RBP21.36■■□□□ 1.01
HMBOX1-212ENST00000558662 KIF21AQ7Z4S6 1674 aa21.35■■□□□ 1.01
HMBOX1-212ENST00000558662 PDS5BQ9NTI5 1447 aa21.35■■□□□ 1.01
HMBOX1-212ENST00000558662 BRD4O60885 1362 aaPredicted RBP21.35■■□□□ 1.01
HMBOX1-212ENST00000558662 CUL7Q14999 1698 aa21.34■■□□□ 1.01
HMBOX1-212ENST00000558662 DNMBPQ6XZF7 1577 aa21.33■■□□□ 1.01
HMBOX1-212ENST00000558662 L3MBTL2Q969R5 705 aa21.33■■□□□ 1.01
HMBOX1-212ENST00000558662 UGGT2Q9NYU1 1516 aa21.33■■□□□ 1.01
HMBOX1-212ENST00000558662 FHOD3Q2V2M9 1422 aa21.32■■□□□ 1
HMBOX1-212ENST00000558662 RCAN3Q9UKA8 241 aa21.31■■□□□ 1
HMBOX1-212ENST00000558662 L1TD1Q5T7N2 865 aaKnown RBP21.28■■□□□ 1
HMBOX1-212ENST00000558662 EXOC6Q8TAG9 804 aa21.28■■□□□ 1
HMBOX1-212ENST00000558662 ANKRD30BQ9BXX2 1392 aa21.27■■□□□ 1
HMBOX1-212ENST00000558662 TOPBP1Q92547 1522 aa21.27■■□□□ 1
HMBOX1-212ENST00000558662 TMC1Q8TDI8 760 aa21.26■□□□□ 0.99
HMBOX1-212ENST00000558662 MPHOSPH9Q99550 1183 aa21.26■□□□□ 0.99
HMBOX1-212ENST00000558662 KIF15Q9NS87 1388 aa21.26■□□□□ 0.99
HMBOX1-212ENST00000558662 URB2Q14146 1524 aaKnown RBP21.25■□□□□ 0.99
HMBOX1-212ENST00000558662 SAMD9Q5K651 1589 aa21.24■□□□□ 0.99
HMBOX1-212ENST00000558662 RALBP1Q15311 655 aa21.24■□□□□ 0.99
HMBOX1-212ENST00000558662 GRIN2BQ13224 1484 aa21.24■□□□□ 0.99
HMBOX1-212ENST00000558662 KIF14Q15058 1648 aa21.23■□□□□ 0.99
HMBOX1-212ENST00000558662 PLEKHH2Q8IVE3 1493 aa21.23■□□□□ 0.99
HMBOX1-212ENST00000558662 ROCK1Q13464 1354 aa21.23■□□□□ 0.99
HMBOX1-212ENST00000558662 RRP9O43818 475 aaKnown RBP21.22■□□□□ 0.99
HMBOX1-212ENST00000558662 LRRIQ1Q96JM4 1722 aa21.22■□□□□ 0.99
HMBOX1-212ENST00000558662 MBD5Q9P267 1494 aa21.21■□□□□ 0.99
HMBOX1-212ENST00000558662 ATP1B4Q9UN42 357 aaPredicted RBP21.2■□□□□ 0.99
HMBOX1-212ENST00000558662 MYBBP1AQ9BQG0 1328 aaKnown RBP21.2■□□□□ 0.98
HMBOX1-212ENST00000558662 NBPF8Q3BBV2 869 aa21.19■□□□□ 0.98
HMBOX1-212ENST00000558662 KDM5CP41229 1560 aa21.19■□□□□ 0.98
HMBOX1-212ENST00000558662 BCORL1Q5H9F3 1711 aa21.18■□□□□ 0.98
HMBOX1-212ENST00000558662 FAM161AQ3B820 660 aa21.18■□□□□ 0.98
HMBOX1-212ENST00000558662 CENPQQ7L2Z9 268 aaPredicted RBP21.16■□□□□ 0.98
HMBOX1-212ENST00000558662 VIRMAQ69YN4 1812 aaKnown RBP21.16■□□□□ 0.98
HMBOX1-212ENST00000558662 POLA1P09884 1462 aaPredicted RBP21.15■□□□□ 0.98
HMBOX1-212ENST00000558662 E9PCH4 1651 aa21.15■□□□□ 0.98
HMBOX1-212ENST00000558662 KDM6BO15054 1643 aa21.14■□□□□ 0.97
HMBOX1-212ENST00000558662 USP47Q96K76 1375 aa21.13■□□□□ 0.97
HMBOX1-212ENST00000558662 MRC2Q9UBG0 1479 aa21.12■□□□□ 0.97
HMBOX1-212ENST00000558662 KDM2BQ8NHM5 1336 aa21.12■□□□□ 0.97
HMBOX1-212ENST00000558662 ABCA10Q8WWZ4 1543 aa21.12■□□□□ 0.97
HMBOX1-212ENST00000558662 DCAF11Q8TEB1 546 aa21.1■□□□□ 0.97
HMBOX1-212ENST00000558662 UHRF1BP1Q6BDS2 1440 aa21.09■□□□□ 0.97
HMBOX1-212ENST00000558662 P3H3Q8IVL6 736 aa21.09■□□□□ 0.97
HMBOX1-212ENST00000558662 FRAT2O75474 233 aaPredicted RBP21.08■□□□□ 0.97
HMBOX1-212ENST00000558662 CLCN1P35523 988 aa21.08■□□□□ 0.96
HMBOX1-212ENST00000558662 RRP7BPQ9NSQ0 103 aa21.08■□□□□ 0.96
HMBOX1-212ENST00000558662 RALGAPBQ86X10 1494 aa21.07■□□□□ 0.96
HMBOX1-212ENST00000558662 WDR62O43379 1518 aa21.07■□□□□ 0.96
HMBOX1-212ENST00000558662 HSP90AA2PQ14568 343 aaPredicted RBP21.06■□□□□ 0.96
HMBOX1-212ENST00000558662 HSP90AA1P07900 732 aaKnown RBP21.05■□□□□ 0.96
HMBOX1-212ENST00000558662 NLRP13Q86W25 1043 aa21.05■□□□□ 0.96
HMBOX1-212ENST00000558662 ZMYND15Q9H091 742 aa21.05■□□□□ 0.96
HMBOX1-212ENST00000558662 ARHGEF12Q9NZN5 1544 aa21.04■□□□□ 0.96
HMBOX1-212ENST00000558662 GAPVD1Q14C86 1478 aa21.04■□□□□ 0.96
HMBOX1-212ENST00000558662 RAD54L2Q9Y4B4 1467 aa21.04■□□□□ 0.96
HMBOX1-212ENST00000558662 BLMP54132 1417 aaPredicted RBP21.04■□□□□ 0.96
HMBOX1-212ENST00000558662 BECN1Q14457 450 aa21.03■□□□□ 0.96
HMBOX1-212ENST00000558662 C8orf34Q49A92 452 aa21.03■□□□□ 0.96
HMBOX1-212ENST00000558662 PNNQ9H307 717 aaKnown RBP21.03■□□□□ 0.96
HMBOX1-212ENST00000558662 DNMT1P26358 1616 aaKnown RBP21.03■□□□□ 0.96
HMBOX1-212ENST00000558662 RRAGDQ9NQL2 400 aaPredicted RBP21.01■□□□□ 0.95
HMBOX1-212ENST00000558662 TARBP1Q13395 1621 aaKnown RBP21.01■□□□□ 0.95
HMBOX1-212ENST00000558662 CCDC144AA2RUR9 1427 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms