RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 EFCAB5A4FU69 1503 aa6.58□□□□□ -1.36
ZEB1-212ENST00000558655 RIMS1Q86UR5 1692 aaKnown RBP6.56□□□□□ -1.36
ZEB1-212ENST00000558655 CPS1P31327 1500 aa6.56□□□□□ -1.36
ZEB1-212ENST00000558655 FBLN2P98095 1184 aa6.56□□□□□ -1.36
ZEB1-212ENST00000558655 POGZQ7Z3K3 1410 aa6.56□□□□□ -1.36
ZEB1-212ENST00000558655 ABCC2Q92887 1545 aa6.54□□□□□ -1.36
ZEB1-212ENST00000558655 KIAA0556O60303 1618 aa6.54□□□□□ -1.36
ZEB1-212ENST00000558655 FER1L4A9Z1Z3 1794 aa6.53□□□□□ -1.36
ZEB1-212ENST00000558655 PTPRKQ15262 1439 aa6.53□□□□□ -1.36
ZEB1-212ENST00000558655 RANGAP1P46060 587 aaPredicted RBP6.53□□□□□ -1.36
ZEB1-212ENST00000558655 CACNB1Q02641 598 aaPredicted RBP6.53□□□□□ -1.36
ZEB1-212ENST00000558655 KLHL34Q8N239 644 aa6.53□□□□□ -1.36
ZEB1-212ENST00000558655 DISP1Q96F81 1524 aa6.52□□□□□ -1.37
ZEB1-212ENST00000558655 HOMEZQ8IX15 550 aa6.52□□□□□ -1.37
ZEB1-212ENST00000558655 TPRNQ4KMQ1 711 aa6.51□□□□□ -1.37
ZEB1-212ENST00000558655 FAM9AQ8IZU1 332 aaPredicted RBP6.51□□□□□ -1.37
ZEB1-212ENST00000558655 NHSL1Q5SYE7 1610 aa6.5□□□□□ -1.37
ZEB1-212ENST00000558655 SETD1BQ9UPS6 1966 aaKnown RBP6.5□□□□□ -1.37
ZEB1-212ENST00000558655 ARHGAP35Q9NRY4 1499 aa6.5□□□□□ -1.37
ZEB1-212ENST00000558655 ZBTB22O15209 634 aa6.49□□□□□ -1.37
ZEB1-212ENST00000558655 CEP162Q5TB80 1403 aa6.49□□□□□ -1.37
ZEB1-212ENST00000558655 FANCAO15360 1455 aa6.48□□□□□ -1.37
ZEB1-212ENST00000558655 ARHGEF40Q8TER5 1519 aa6.48□□□□□ -1.37
ZEB1-212ENST00000558655 PRG4Q92954 1404 aaPredicted RBP6.48□□□□□ -1.37
ZEB1-212ENST00000558655 ABCA8O94911 1581 aa6.48□□□□□ -1.37
ZEB1-212ENST00000558655 CLIP1P30622 1438 aa6.47□□□□□ -1.37
ZEB1-212ENST00000558655 UPF1Q92900 1129 aaKnown RBP eCLIP6.47□□□□□ -1.37
ZEB1-212ENST00000558655 BCANQ96GW7 911 aa6.47□□□□□ -1.37
ZEB1-212ENST00000558655 CARMIL2Q6F5E8 1435 aa6.47□□□□□ -1.37
ZEB1-212ENST00000558655 ASXL2Q76L83 1435 aa6.47□□□□□ -1.37
ZEB1-212ENST00000558655 RAPGEF6Q8TEU7 1601 aa6.46□□□□□ -1.38
ZEB1-212ENST00000558655 LRRIQ1Q96JM4 1722 aa6.46□□□□□ -1.38
ZEB1-212ENST00000558655 TOM1O60784 492 aa6.46□□□□□ -1.38
ZEB1-212ENST00000558655 JPH4Q96JJ6 628 aa6.46□□□□□ -1.38
ZEB1-212ENST00000558655 UHRF1BP1Q6BDS2 1440 aa6.45□□□□□ -1.38
ZEB1-212ENST00000558655 NCOA1Q15788 1441 aa6.45□□□□□ -1.38
ZEB1-212ENST00000558655 PLA2R1Q13018 1463 aa6.45□□□□□ -1.38
ZEB1-212ENST00000558655 MAP3K1Q13233 1512 aa6.45□□□□□ -1.38
ZEB1-212ENST00000558655 LOC105371045A0A1W2PR82 267 aa6.45□□□□□ -1.38
ZEB1-212ENST00000558655 UBAP1LF5GYI3 381 aa6.45□□□□□ -1.38
ZEB1-212ENST00000558655 SLC4A2P04920 1241 aa6.45□□□□□ -1.38
ZEB1-212ENST00000558655 UBTFP17480 764 aaKnown RBP6.45□□□□□ -1.38
ZEB1-212ENST00000558655 PODXL2Q9NZ53 605 aa6.45□□□□□ -1.38
ZEB1-212ENST00000558655 HECW1Q76N89 1606 aa6.45□□□□□ -1.38
ZEB1-212ENST00000558655 FYCO1Q9BQS8 1478 aa6.44□□□□□ -1.38
ZEB1-212ENST00000558655 FMN1Q68DA7 1419 aa6.44□□□□□ -1.38
ZEB1-212ENST00000558655 KDM5BQ9UGL1 1544 aa6.43□□□□□ -1.38
ZEB1-212ENST00000558655 VPS8Q8N3P4 1428 aa6.43□□□□□ -1.38
ZEB1-212ENST00000558655 EIF5BO60841 1220 aaKnown RBP6.43□□□□□ -1.38
ZEB1-212ENST00000558655 CASKIN1Q8WXD9 1431 aa6.43□□□□□ -1.38
ZEB1-212ENST00000558655 ARHGEF12Q9NZN5 1544 aa6.42□□□□□ -1.38
ZEB1-212ENST00000558655 MAGI2Q86UL8 1455 aa6.42□□□□□ -1.38
ZEB1-212ENST00000558655 FHOD3Q2V2M9 1422 aa6.42□□□□□ -1.38
ZEB1-212ENST00000558655 NEO1Q92859 1461 aa6.41□□□□□ -1.38
ZEB1-212ENST00000558655 SYNMO15061 1565 aa6.4□□□□□ -1.38
ZEB1-212ENST00000558655 HSPA1LP34931 641 aa6.4□□□□□ -1.38
ZEB1-212ENST00000558655 ZMYM4Q5VZL5 1548 aa6.4□□□□□ -1.38
ZEB1-212ENST00000558655 CCDC18Q5T9S5 1454 aa6.4□□□□□ -1.38
ZEB1-212ENST00000558655 PTPRGP23470 1445 aa6.4□□□□□ -1.39
ZEB1-212ENST00000558655 UACAQ9BZF9 1416 aa6.4□□□□□ -1.39
ZEB1-212ENST00000558655 RGS17Q9UGC6 210 aaPredicted RBP6.4□□□□□ -1.39
ZEB1-212ENST00000558655 ZCCHC11Q5TAX3 1644 aaKnown RBP6.4□□□□□ -1.39
ZEB1-212ENST00000558655 NUP153P49790 1475 aaKnown RBP6.39□□□□□ -1.39
ZEB1-212ENST00000558655 SETD1AO15047 1707 aaKnown RBP6.39□□□□□ -1.39
ZEB1-212ENST00000558655 PLCB2Q00722 1185 aa6.39□□□□□ -1.39
ZEB1-212ENST00000558655 ZRANB1Q9UGI0 708 aa6.39□□□□□ -1.39
ZEB1-212ENST00000558655 WDR7Q9Y4E6 1490 aa6.39□□□□□ -1.39
ZEB1-212ENST00000558655 TIAM1Q13009 1591 aa6.39□□□□□ -1.39
ZEB1-212ENST00000558655 RNF17Q9BXT8 1623 aaKnown RBP6.39□□□□□ -1.39
ZEB1-212ENST00000558655 RBM33Q96EV2 1170 aaKnown RBP6.39□□□□□ -1.39
ZEB1-212ENST00000558655 ZNF142P52746 1687 aaPredicted RBP6.38□□□□□ -1.39
ZEB1-212ENST00000558655 GTF3C3Q9Y5Q9 886 aa6.38□□□□□ -1.39
ZEB1-212ENST00000558655 CCDC125Q86Z20 511 aa6.37□□□□□ -1.39
ZEB1-212ENST00000558655 KDM5CP41229 1560 aa6.37□□□□□ -1.39
ZEB1-212ENST00000558655 CFAP74Q9C0B2 1584 aa6.37□□□□□ -1.39
ZEB1-212ENST00000558655 PKD2Q13563 968 aa6.36□□□□□ -1.39
ZEB1-212ENST00000558655 ATP10BO94823 1461 aa6.35□□□□□ -1.39
ZEB1-212ENST00000558655 EHBP1L1Q8N3D4 1523 aa6.35□□□□□ -1.39
ZEB1-212ENST00000558655 AKNAQ7Z591 1439 aa6.35□□□□□ -1.39
ZEB1-212ENST00000558655 PCGF6Q9BYE7 350 aa6.34□□□□□ -1.39
ZEB1-212ENST00000558655 SUPT6HQ7KZ85 1726 aaKnown RBP6.34□□□□□ -1.39
ZEB1-212ENST00000558655 HSPA2P54652 639 aa6.34□□□□□ -1.4
ZEB1-212ENST00000558655 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.34□□□□□ -1.4
ZEB1-212ENST00000558655 CDK13Q14004 1512 aaKnown RBP6.33□□□□□ -1.4
ZEB1-212ENST00000558655 NPATQ14207 1427 aa6.33□□□□□ -1.4
ZEB1-212ENST00000558655 REREQ9P2R6 1566 aa6.33□□□□□ -1.4
ZEB1-212ENST00000558655 LRRC9Q6ZRR7 1453 aa6.33□□□□□ -1.4
ZEB1-212ENST00000558655 ABCA9Q8IUA7 1624 aa6.33□□□□□ -1.4
ZEB1-212ENST00000558655 MROH2AA6NES4 1674 aa6.32□□□□□ -1.4
ZEB1-212ENST00000558655 ITSN2Q9NZM3 1697 aa6.32□□□□□ -1.4
ZEB1-212ENST00000558655 CD109Q6YHK3 1445 aa6.32□□□□□ -1.4
ZEB1-212ENST00000558655 HAP1P54257 671 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-212ENST00000558655 KIF14Q15058 1648 aa6.32□□□□□ -1.4
ZEB1-212ENST00000558655 TROQ12816 1431 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-212ENST00000558655 FRMPD1Q5SYB0 1578 aa6.31□□□□□ -1.4
ZEB1-212ENST00000558655 CDC42BPAQ5VT25 1732 aa6.31□□□□□ -1.4
ZEB1-212ENST00000558655 MYO5CQ9NQX4 1742 aa6.31□□□□□ -1.4
ZEB1-212ENST00000558655 P3H3Q8IVL6 736 aa6.31□□□□□ -1.4
ZEB1-212ENST00000558655 FOXD4L1Q9NU39 408 aa6.31□□□□□ -1.4
ZEB1-212ENST00000558655 ALKQ9UM73 1620 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms