RNA–Protein interactions for RNA: ENST00000558605.1

IDH3A-209, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, human

TSL 4

Gene IDH3A, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IDH3A-209	ENST00000558605	PLCH2	O75038	1416 aa		33.51	■■■□□ 2.95
IDH3A-209	ENST00000558605	FER1L4	A9Z1Z3	1794 aa		33.46	■■■□□ 2.95
IDH3A-209	ENST00000558605	CERK	Q8TCT0	537 aa		33.44	■■■□□ 2.94
IDH3A-209	ENST00000558605	ATP10A	O60312	1499 aa		33.42	■■■□□ 2.94
IDH3A-209	ENST00000558605	ARHGEF12	Q9NZN5	1544 aa		33.4	■■■□□ 2.94
IDH3A-209	ENST00000558605	ATP1B4	Q9UN42	357 aa	Predicted RBP	33.39	■■■□□ 2.94
IDH3A-209	ENST00000558605	EFCAB2	Q5VUJ9	269 aa		33.38	■■■□□ 2.93
IDH3A-209	ENST00000558605	C9orf84	Q5VXU9	1444 aa		33.37	■■■□□ 2.93
IDH3A-209	ENST00000558605	MYO5C	Q9NQX4	1742 aa		33.33	■■■□□ 2.93
IDH3A-209	ENST00000558605	CEBPA	P49715	358 aa	Predicted RBP	33.33	■■■□□ 2.93
IDH3A-209	ENST00000558605	EHMT2	Q96KQ7	1210 aa		33.31	■■■□□ 2.92
IDH3A-209	ENST00000558605	FMN1	Q68DA7	1419 aa		33.3	■■■□□ 2.92
IDH3A-209	ENST00000558605	KIF14	Q15058	1648 aa		33.29	■■■□□ 2.92
IDH3A-209	ENST00000558605	CDK11A	Q9UQ88	783 aa	Predicted RBP	33.29	■■■□□ 2.92
IDH3A-209	ENST00000558605	PREX1	Q8TCU6	1659 aa		33.29	■■■□□ 2.92
IDH3A-209	ENST00000558605	UBTF	P17480	764 aa	Known RBP	33.27	■■■□□ 2.92
IDH3A-209	ENST00000558605	ZNF518A	Q6AHZ1	1483 aa		33.25	■■■□□ 2.91
IDH3A-209	ENST00000558605	ARHGAP35	Q9NRY4	1499 aa		33.25	■■■□□ 2.91
IDH3A-209	ENST00000558605	AFAP1	Q8N556	730 aa		33.25	■■■□□ 2.91
IDH3A-209	ENST00000558605	TRO	Q12816	1431 aa	Predicted RBP	33.22	■■■□□ 2.91
IDH3A-209	ENST00000558605	ARHGAP5	Q13017	1502 aa		33.22	■■■□□ 2.91
IDH3A-209	ENST00000558605	KDM5C	P41229	1560 aa		33.21	■■■□□ 2.91
IDH3A-209	ENST00000558605	MYT1L	Q9UL68	1186 aa		33.18	■■■□□ 2.9
IDH3A-209	ENST00000558605	STRC	Q7RTU9	1775 aa		33.17	■■■□□ 2.9
IDH3A-209	ENST00000558605	DMRT2	Q9Y5R5	561 aa		33.16	■■■□□ 2.9
IDH3A-209	ENST00000558605	UHRF1BP1	Q6BDS2	1440 aa		33.15	■■■□□ 2.9
IDH3A-209	ENST00000558605	DIP2C	Q9Y2E4	1556 aa		33.15	■■■□□ 2.9
IDH3A-209	ENST00000558605	CLIP1	P30622	1438 aa		33.14	■■■□□ 2.9
IDH3A-209	ENST00000558605	RERE	Q9P2R6	1566 aa		33.11	■■■□□ 2.89
IDH3A-209	ENST00000558605	LRRIQ1	Q96JM4	1722 aa		33.11	■■■□□ 2.89
IDH3A-209	ENST00000558605	ABCA6	Q8N139	1617 aa		33.09	■■■□□ 2.89
IDH3A-209	ENST00000558605	MLH3	Q9UHC1	1453 aa		33.08	■■■□□ 2.89
IDH3A-209	ENST00000558605	CDC42BPB	Q9Y5S2	1711 aa		33.08	■■■□□ 2.89
IDH3A-209	ENST00000558605	SETD1B	Q9UPS6	1966 aa	Known RBP	33.06	■■■□□ 2.88
IDH3A-209	ENST00000558605	TRAPPC8	Q9Y2L5	1435 aa		33.04	■■■□□ 2.88
IDH3A-209	ENST00000558605	C3	P01024	1663 aa		33.04	■■■□□ 2.88
IDH3A-209	ENST00000558605	AGL	P35573	1532 aa		33.02	■■■□□ 2.88
IDH3A-209	ENST00000558605	ABCC1	P33527	1531 aa		33	■■■□□ 2.87
IDH3A-209	ENST00000558605	PTPRT	O14522	1441 aa		33	■■■□□ 2.87
IDH3A-209	ENST00000558605	PREX2	Q70Z35	1606 aa		32.99	■■■□□ 2.87
IDH3A-209	ENST00000558605	ESF1	Q9H501	851 aa	Known RBP	32.99	■■■□□ 2.87
IDH3A-209	ENST00000558605	DISP3	Q9P2K9	1392 aa		32.98	■■■□□ 2.87
IDH3A-209	ENST00000558605	ILDR2	Q71H61	639 aa		32.96	■■■□□ 2.87
IDH3A-209	ENST00000558605	ITSN2	Q9NZM3	1697 aa		32.96	■■■□□ 2.87
IDH3A-209	ENST00000558605	KIDINS220	Q9ULH0	1771 aa		32.92	■■■□□ 2.86
IDH3A-209	ENST00000558605	CASKIN1	Q8WXD9	1431 aa		32.91	■■■□□ 2.86
IDH3A-209	ENST00000558605	CCDC18	Q5T9S5	1454 aa		32.9	■■■□□ 2.86
IDH3A-209	ENST00000558605	CNTLN	Q9NXG0	1405 aa		32.88	■■■□□ 2.85
IDH3A-209	ENST00000558605	LTBP4	Q8N2S1	1624 aa		32.88	■■■□□ 2.85
IDH3A-209	ENST00000558605	NCOA1	Q15788	1441 aa		32.86	■■■□□ 2.85
IDH3A-209	ENST00000558605	CHIC1	Q5VXU3	224 aa		32.86	■■■□□ 2.85
IDH3A-209	ENST00000558605	CDC42BPA	Q5VT25	1732 aa		32.85	■■■□□ 2.85
IDH3A-209	ENST00000558605	SAMD9L	Q8IVG5	1584 aa		32.82	■■■□□ 2.84
IDH3A-209	ENST00000558605	SOCS7	O14512	581 aa		32.81	■■■□□ 2.84
IDH3A-209	ENST00000558605	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.81	■■■□□ 2.84
IDH3A-209	ENST00000558605	NPAT	Q14207	1427 aa		32.77	■■■□□ 2.84
IDH3A-209	ENST00000558605	CAMSAP1	Q5T5Y3	1602 aa		32.77	■■■□□ 2.84
IDH3A-209	ENST00000558605	IQSEC2	Q5JU85	1478 aa		32.76	■■■□□ 2.84
IDH3A-209	ENST00000558605	ZMYM3	Q14202	1370 aa		32.76	■■■□□ 2.83
IDH3A-209	ENST00000558605	SPAG9	O60271	1321 aa	Known RBP	32.76	■■■□□ 2.83
IDH3A-209	ENST00000558605	MROH2A	A6NES4	1674 aa		32.75	■■■□□ 2.83
IDH3A-209	ENST00000558605	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.75	■■■□□ 2.83
IDH3A-209	ENST00000558605	SPATA31D1	Q6ZQQ2	1576 aa		32.75	■■■□□ 2.83
IDH3A-209	ENST00000558605	SYCP2	Q9BX26	1530 aa		32.74	■■■□□ 2.83
IDH3A-209	ENST00000558605	FYCO1	Q9BQS8	1478 aa		32.73	■■■□□ 2.83
IDH3A-209	ENST00000558605	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.72	■■■□□ 2.83
IDH3A-209	ENST00000558605	NCKAP5L	Q9HCH0	1330 aa		32.71	■■■□□ 2.83
IDH3A-209	ENST00000558605	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.71	■■■□□ 2.83
IDH3A-209	ENST00000558605	ATP7A	Q04656	1500 aa		32.66	■■■□□ 2.82
IDH3A-209	ENST00000558605	CLTC	Q00610	1675 aa	Known RBP	32.65	■■■□□ 2.82
IDH3A-209	ENST00000558605	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.64	■■■□□ 2.82
IDH3A-209	ENST00000558605	KIAA1107	Q9UPP5	1409 aa		32.63	■■■□□ 2.81
IDH3A-209	ENST00000558605	A2M	P01023	1474 aa		32.62	■■■□□ 2.81
IDH3A-209	ENST00000558605	PLXNC1	O60486	1568 aa		32.62	■■■□□ 2.81
IDH3A-209	ENST00000558605	INO80	Q9ULG1	1556 aa	Predicted RBP	32.62	■■■□□ 2.81
IDH3A-209	ENST00000558605	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.61	■■■□□ 2.81
IDH3A-209	ENST00000558605	PLEKHH2	Q8IVE3	1493 aa		32.6	■■■□□ 2.81
IDH3A-209	ENST00000558605	PTPRK	Q15262	1439 aa		32.6	■■■□□ 2.81
IDH3A-209	ENST00000558605	MYO3A	Q8NEV4	1616 aa		32.59	■■■□□ 2.81
IDH3A-209	ENST00000558605	GGT6	Q6P531	493 aa		32.59	■■■□□ 2.81
IDH3A-209	ENST00000558605	PKD2	Q13563	968 aa		32.58	■■■□□ 2.81
IDH3A-209	ENST00000558605	ZNF142	P52746	1687 aa	Predicted RBP	32.58	■■■□□ 2.81
IDH3A-209	ENST00000558605	PLA2R1	Q13018	1463 aa		32.57	■■■□□ 2.8
IDH3A-209	ENST00000558605	CCNB3	Q8WWL7	1395 aa		32.57	■■■□□ 2.8
IDH3A-209	ENST00000558605	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.55	■■■□□ 2.8
IDH3A-209	ENST00000558605	UBAP1L	F5GYI3	381 aa		32.55	■■■□□ 2.8
IDH3A-209	ENST00000558605	TCOF1	Q13428	1488 aa	Known RBP	32.54	■■■□□ 2.8
IDH3A-209	ENST00000558605	PPP6R1	Q9UPN7	881 aa		32.48	■■■□□ 2.79
IDH3A-209	ENST00000558605	ZNF644	Q9H582	1327 aa	Predicted RBP	32.48	■■■□□ 2.79
IDH3A-209	ENST00000558605	MTUS2	Q5JR59	1369 aa		32.46	■■■□□ 2.79
IDH3A-209	ENST00000558605	ADGB	Q8N7X0	1667 aa		32.46	■■■□□ 2.79
IDH3A-209	ENST00000558605	A2ML1	A8K2U0	1454 aa		32.42	■■■□□ 2.78
IDH3A-209	ENST00000558605	MBD5	Q9P267	1494 aa		32.42	■■■□□ 2.78
IDH3A-209	ENST00000558605	TIAM1	Q13009	1591 aa		32.4	■■■□□ 2.78
IDH3A-209	ENST00000558605	DNMT1	P26358	1616 aa	Known RBP	32.39	■■■□□ 2.78
IDH3A-209	ENST00000558605	DHX29	Q7Z478	1369 aa	Known RBP	32.36	■■■□□ 2.77
IDH3A-209	ENST00000558605	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.35	■■■□□ 2.77
IDH3A-209	ENST00000558605	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.33	■■■□□ 2.77
IDH3A-209	ENST00000558605	EHBP1L1	Q8N3D4	1523 aa		32.3	■■■□□ 2.76
IDH3A-209	ENST00000558605	TNR	Q92752	1358 aa		32.3	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms