RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 GCC2Q8IWJ2 1684 aa15.14■□□□□ 0.01
TPM1-210ENST00000558264 GTF3C3Q9Y5Q9 886 aa15.13■□□□□ 0.01
TPM1-210ENST00000558264 DENND4BO75064 1496 aaPredicted RBP15.13■□□□□ 0.01
TPM1-210ENST00000558264 PLEKHD1A6NEE1 506 aa15.13■□□□□ 0.01
TPM1-210ENST00000558264 CHD1O14646 1710 aa15.13■□□□□ 0.01
TPM1-210ENST00000558264 GPATCH8Q9UKJ3 1502 aaKnown RBP15.12■□□□□ 0.01
TPM1-210ENST00000558264 DDX10Q13206 875 aaKnown RBP15.12■□□□□ 0.01
TPM1-210ENST00000558264 MPHOSPH9Q99550 1183 aa15.12■□□□□ 0.01
TPM1-210ENST00000558264 ATP10BO94823 1461 aa15.12■□□□□ 0.01
TPM1-210ENST00000558264 CAMSAP2Q08AD1 1489 aa15.12■□□□□ 0.01
TPM1-210ENST00000558264 PTPRGP23470 1445 aa15.11■□□□□ 0.01
TPM1-210ENST00000558264 TIMELESSQ9UNS1 1208 aa15.11■□□□□ 0.01
TPM1-210ENST00000558264 ABCA8O94911 1581 aa15.11■□□□□ 0.01
TPM1-210ENST00000558264 DNMT1P26358 1616 aaKnown RBP15.1■□□□□ 0.01
TPM1-210ENST00000558264 AKNAQ7Z591 1439 aa15.09■□□□□ 0.01
TPM1-210ENST00000558264 KCNH8Q96L42 1107 aa15.06■□□□□ 0
TPM1-210ENST00000558264 ERCC6L2Q5T890 1561 aa15.06■□□□□ 0
TPM1-210ENST00000558264 ROCK1Q13464 1354 aa15.05■□□□□ 0
TPM1-210ENST00000558264 SLC4A1APQ9BWU0 796 aaKnown RBP15.05■□□□□ -0
TPM1-210ENST00000558264 ITSN2Q9NZM3 1697 aa15.05■□□□□ -0
TPM1-210ENST00000558264 ADCY10Q96PN6 1610 aa15.04■□□□□ -0
TPM1-210ENST00000558264 KDM5BQ9UGL1 1544 aa15.02■□□□□ -0
TPM1-210ENST00000558264 HNRNPMP52272 730 aaKnown RBP eCLIP15.02□□□□□ -0.01
TPM1-210ENST00000558264 ABCC10Q5T3U5 1492 aa15.01□□□□□ -0.01
TPM1-210ENST00000558264 NCOA1Q15788 1441 aa15.01□□□□□ -0.01
TPM1-210ENST00000558264 CDC42BPAQ5VT25 1732 aa15.01□□□□□ -0.01
TPM1-210ENST00000558264 L3MBTL2Q969R5 705 aa15□□□□□ -0.01
TPM1-210ENST00000558264 ANKRD30BQ9BXX2 1392 aa14.97□□□□□ -0.01
TPM1-210ENST00000558264 ANKRD30AQ9BXX3 1397 aa14.96□□□□□ -0.01
TPM1-210ENST00000558264 PZPP20742 1482 aa14.95□□□□□ -0.02
TPM1-210ENST00000558264 CROCC2H7BZ55 1655 aa14.95□□□□□ -0.02
TPM1-210ENST00000558264 C9orf84Q5VXU9 1444 aa14.95□□□□□ -0.02
TPM1-210ENST00000558264 ADGBQ8N7X0 1667 aa14.94□□□□□ -0.02
TPM1-210ENST00000558264 SHROOM2Q13796 1616 aa14.94□□□□□ -0.02
TPM1-210ENST00000558264 TSPY4P0CV99 314 aa14.94□□□□□ -0.02
TPM1-210ENST00000558264 TSPY10P0CW01 314 aa14.94□□□□□ -0.02
TPM1-210ENST00000558264 HSPA5P11021 654 aaKnown RBP14.94□□□□□ -0.02
TPM1-210ENST00000558264 ANKRD50Q9ULJ7 1429 aa14.93□□□□□ -0.02
TPM1-210ENST00000558264 PKD2Q13563 968 aa14.93□□□□□ -0.02
TPM1-210ENST00000558264 NBPF8Q3BBV2 869 aa14.92□□□□□ -0.02
TPM1-210ENST00000558264 ADGRL2O95490 1459 aa14.92□□□□□ -0.02
TPM1-210ENST00000558264 RPRD2Q5VT52 1461 aaKnown RBP14.91□□□□□ -0.02
TPM1-210ENST00000558264 ZNF326Q5BKZ1 582 aaKnown RBP14.9□□□□□ -0.02
TPM1-210ENST00000558264 TTC37Q6PGP7 1564 aa14.9□□□□□ -0.02
TPM1-210ENST00000558264 NUP155O75694 1391 aa14.9□□□□□ -0.02
TPM1-210ENST00000558264 SAMD9LQ8IVG5 1584 aa14.89□□□□□ -0.03
TPM1-210ENST00000558264 KIF15Q9NS87 1388 aa14.89□□□□□ -0.03
TPM1-210ENST00000558264 CDC42BPBQ9Y5S2 1711 aa14.89□□□□□ -0.03
TPM1-210ENST00000558264 ABCC2Q92887 1545 aa14.88□□□□□ -0.03
TPM1-210ENST00000558264 MBD5Q9P267 1494 aa14.88□□□□□ -0.03
TPM1-210ENST00000558264 ARHGAP5Q13017 1502 aa14.88□□□□□ -0.03
TPM1-210ENST00000558264 TEX14Q8IWB6 1497 aa14.87□□□□□ -0.03
TPM1-210ENST00000558264 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.87□□□□□ -0.03
TPM1-210ENST00000558264 ANP32CO43423 234 aa14.87□□□□□ -0.03
TPM1-210ENST00000558264 EIF4G2P78344 907 aaKnown RBP eCLIP14.87□□□□□ -0.03
TPM1-210ENST00000558264 WASHC2AQ641Q2 1341 aa14.86□□□□□ -0.03
TPM1-210ENST00000558264 SYCP2Q9BX26 1530 aa14.86□□□□□ -0.03
TPM1-210ENST00000558264 KIAA1107Q9UPP5 1409 aa14.86□□□□□ -0.03
TPM1-210ENST00000558264 PREX2Q70Z35 1606 aa14.86□□□□□ -0.03
TPM1-210ENST00000558264 CLASP1Q7Z460 1538 aa14.86□□□□□ -0.03
TPM1-210ENST00000558264 SHANK2Q9UPX8 1470 aa14.85□□□□□ -0.03
TPM1-210ENST00000558264 CCDC141Q6ZP82 1450 aa14.84□□□□□ -0.03
TPM1-210ENST00000558264 C11orf95C9JLR9 678 aaPredicted RBP14.84□□□□□ -0.03
TPM1-210ENST00000558264 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.84□□□□□ -0.031e-6■■■□□ 19
TPM1-210ENST00000558264 ZCCHC11Q5TAX3 1644 aaKnown RBP14.81□□□□□ -0.04
TPM1-210ENST00000558264 ARHGEF5Q12774 1597 aa14.81□□□□□ -0.04
TPM1-210ENST00000558264 KDM2AQ9Y2K7 1162 aa14.79□□□□□ -0.04
TPM1-210ENST00000558264 ARHGEF12Q9NZN5 1544 aa14.78□□□□□ -0.04
TPM1-210ENST00000558264 MYO5CQ9NQX4 1742 aa14.78□□□□□ -0.04
TPM1-210ENST00000558264 POLR3GLQ9BT43 218 aa14.77□□□□□ -0.04
TPM1-210ENST00000558264 CNGB1Q14028 1251 aaPredicted RBP14.77□□□□□ -0.05
TPM1-210ENST00000558264 RSPH4AQ5TD94 716 aa14.75□□□□□ -0.05
TPM1-210ENST00000558264 CCER2I3L3R5 266 aa14.74□□□□□ -0.05
TPM1-210ENST00000558264 EFCAB2Q5VUJ9 269 aa14.74□□□□□ -0.05
TPM1-210ENST00000558264 PLEKHH2Q8IVE3 1493 aa14.74□□□□□ -0.05
TPM1-210ENST00000558264 CCDC7Q96M83 1385 aa14.74□□□□□ -0.05
TPM1-210ENST00000558264 PLCH2O75038 1416 aa14.73□□□□□ -0.05
TPM1-210ENST00000558264 FAM135AQ9P2D6 1515 aa14.73□□□□□ -0.05
TPM1-210ENST00000558264 DCAF11Q8TEB1 546 aa14.73□□□□□ -0.05
TPM1-210ENST00000558264 TRAPPC8Q9Y2L5 1435 aa14.73□□□□□ -0.05
TPM1-210ENST00000558264 UHRF1BP1LA0JNW5 1464 aa14.73□□□□□ -0.05
TPM1-210ENST00000558264 RGL3Q3MIN7 710 aa14.72□□□□□ -0.05
TPM1-210ENST00000558264 AFAP1Q8N556 730 aa14.72□□□□□ -0.05
TPM1-210ENST00000558264 KIF7Q2M1P5 1343 aa14.72□□□□□ -0.05
TPM1-210ENST00000558264 KDM5DQ9BY66 1539 aa14.72□□□□□ -0.05
TPM1-210ENST00000558264 SPATA31E1Q6ZUB1 1445 aa14.71□□□□□ -0.05
TPM1-210ENST00000558264 USP47Q96K76 1375 aa14.7□□□□□ -0.06
TPM1-210ENST00000558264 CNTLNQ9NXG0 1405 aa14.7□□□□□ -0.06
TPM1-210ENST00000558264 CCDC184Q52MB2 194 aa14.69□□□□□ -0.06
TPM1-210ENST00000558264 MYT1LQ9UL68 1186 aa14.69□□□□□ -0.06
TPM1-210ENST00000558264 CARD11Q9BXL7 1154 aa14.68□□□□□ -0.06
TPM1-210ENST00000558264 MAST1Q9Y2H9 1570 aa14.67□□□□□ -0.06
TPM1-210ENST00000558264 ABCC1P33527 1531 aa14.66□□□□□ -0.06
TPM1-210ENST00000558264 SUPT16HQ9Y5B9 1047 aaKnown RBP14.66□□□□□ -0.06
TPM1-210ENST00000558264 WDR7Q9Y4E6 1490 aa14.66□□□□□ -0.06
TPM1-210ENST00000558264 SPAG9O60271 1321 aaKnown RBP14.66□□□□□ -0.06
TPM1-210ENST00000558264 CCDC144AA2RUR9 1427 aa14.66□□□□□ -0.06
TPM1-210ENST00000558264 PLXNC1O60486 1568 aa14.64□□□□□ -0.07
TPM1-210ENST00000558264 PLA2R1Q13018 1463 aa14.64□□□□□ -0.07
TPM1-210ENST00000558264 OSCARQ8IYS5 282 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms