RNA–Protein interactions for RNA: ENST00000558054.1

IRX3-202, Transcript of iroquois homeobox 3, humanhuman

TSL 2

Gene IRX3, Length 444 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3-202ENST00000558054 PDS5BQ9NTI5 1447 aa18.14■□□□□ 0.49
IRX3-202ENST00000558054 THOC2Q8NI27 1593 aaKnown RBP18.13■□□□□ 0.49
IRX3-202ENST00000558054 RIOK3O14730 519 aaKnown RBP18.12■□□□□ 0.49
IRX3-202ENST00000558054 BOLA1Q9Y3E2 137 aa18.1■□□□□ 0.49
IRX3-202ENST00000558054 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.07■□□□□ 0.48
IRX3-202ENST00000558054 ZFP91Q96JP5 570 aaPredicted RBP18.07■□□□□ 0.48
IRX3-202ENST00000558054 G3V3G9 751 aa18.06■□□□□ 0.48
IRX3-202ENST00000558054 MARVELD3Q96A59 401 aa18.06■□□□□ 0.48
IRX3-202ENST00000558054 MROH2BQ7Z745 1585 aa18.05■□□□□ 0.48
IRX3-202ENST00000558054 TMEM121BQ9BXQ6 578 aaPredicted RBP18.04■□□□□ 0.48
IRX3-202ENST00000558054 VGFO15240 615 aaPredicted RBP18.02■□□□□ 0.48
IRX3-202ENST00000558054 KIF21AQ7Z4S6 1674 aa18.02■□□□□ 0.47
IRX3-202ENST00000558054 CADPSQ9ULU8 1353 aa17.99■□□□□ 0.47
IRX3-202ENST00000558054 SOX12O15370 315 aa17.93■□□□□ 0.46
IRX3-202ENST00000558054 MRC2Q9UBG0 1479 aa17.93■□□□□ 0.46
IRX3-202ENST00000558054 PHF8Q9UPP1 1060 aa17.92■□□□□ 0.46
IRX3-202ENST00000558054 MS4A4AQ96JQ5 239 aa17.91■□□□□ 0.46
IRX3-202ENST00000558054 WDR62O43379 1518 aa17.88■□□□□ 0.45
IRX3-202ENST00000558054 EMP3P54852 163 aa17.87■□□□□ 0.45
IRX3-202ENST00000558054 MICALL2Q8IY33 904 aa17.87■□□□□ 0.45
IRX3-202ENST00000558054 ECM2O94769 699 aaPredicted RBP17.86■□□□□ 0.45
IRX3-202ENST00000558054 HOXB3P14651 431 aaPredicted RBP17.86■□□□□ 0.45
IRX3-202ENST00000558054 BCL11BQ9C0K0 894 aaPredicted RBP17.86■□□□□ 0.45
IRX3-202ENST00000558054 CEP164Q9UPV0 1460 aa17.84■□□□□ 0.45
IRX3-202ENST00000558054 WIZO95785 1651 aa17.83■□□□□ 0.44
IRX3-202ENST00000558054 TMEM92Q6UXU6 159 aa17.82■□□□□ 0.44
IRX3-202ENST00000558054 POTEB3A0JP26 581 aa17.81■□□□□ 0.44
IRX3-202ENST00000558054 POTEBQ6S5H4 581 aa17.81■□□□□ 0.44
IRX3-202ENST00000558054 STK24Q9Y6E0 443 aa17.81■□□□□ 0.44
IRX3-202ENST00000558054 PKD2Q13563 968 aa17.8■□□□□ 0.44
IRX3-202ENST00000558054 FAM205CA6NFA0 338 aa17.79■□□□□ 0.44
IRX3-202ENST00000558054 TAOK2Q9UL54 1235 aa17.78■□□□□ 0.44
IRX3-202ENST00000558054 FANCD2Q9BXW9 1451 aa17.77■□□□□ 0.44
IRX3-202ENST00000558054 HS3ST6Q96QI5 342 aa17.76■□□□□ 0.43
IRX3-202ENST00000558054 STK25O00506 426 aa17.75■□□□□ 0.43
IRX3-202ENST00000558054 RGL2O15211 777 aa17.75■□□□□ 0.43
IRX3-202ENST00000558054 NLRP6P59044 892 aa17.74■□□□□ 0.43
IRX3-202ENST00000558054 FBXO22Q8NEZ5 403 aa17.74■□□□□ 0.43
IRX3-202ENST00000558054 ZNF710Q8N1W2 664 aa17.73■□□□□ 0.43
IRX3-202ENST00000558054 CFTRP13569 1480 aa17.73■□□□□ 0.43
IRX3-202ENST00000558054 DOK7Q18PE1 504 aa17.72■□□□□ 0.43
IRX3-202ENST00000558054 MFRPQ9BY79 579 aa17.7■□□□□ 0.42
IRX3-202ENST00000558054 SPNS2Q8IVW8 549 aa17.69■□□□□ 0.42
IRX3-202ENST00000558054 HOXB1P14653 301 aaPredicted RBP17.68■□□□□ 0.42
IRX3-202ENST00000558054 TOP2AP11388 1531 aaKnown RBP17.66■□□□□ 0.42
IRX3-202ENST00000558054 RSF1Q96T23 1441 aaPredicted RBP17.64■□□□□ 0.42
IRX3-202ENST00000558054 KRTAP3-3Q9BYR6 98 aa17.62■□□□□ 0.41
IRX3-202ENST00000558054 KRTAP3-2Q9BYR7 98 aa17.62■□□□□ 0.41
IRX3-202ENST00000558054 MMRN1Q13201 1228 aa17.61■□□□□ 0.41
IRX3-202ENST00000558054 RIMBP2O15034 1052 aa17.59■□□□□ 0.41
IRX3-202ENST00000558054 URB2Q14146 1524 aaKnown RBP17.58■□□□□ 0.41
IRX3-202ENST00000558054 ERBB3P21860 1342 aa17.58■□□□□ 0.4
IRX3-202ENST00000558054 PRDM2Q13029 1718 aa17.55■□□□□ 0.4
IRX3-202ENST00000558054 GPR153Q6NV75 609 aa17.53■□□□□ 0.4
IRX3-202ENST00000558054 ZSWIM6Q9HCJ5 1215 aa17.51■□□□□ 0.39
IRX3-202ENST00000558054 IFT140Q96RY7 1462 aa17.5■□□□□ 0.39
IRX3-202ENST00000558054 VARS2Q5ST30 1063 aaKnown RBP17.48■□□□□ 0.39
IRX3-202ENST00000558054 ABCC8Q09428 1581 aa17.47■□□□□ 0.39
IRX3-202ENST00000558054 ARSIQ5FYB1 569 aa17.46■□□□□ 0.39
IRX3-202ENST00000558054 C2orf72A6NCS6 295 aa17.45■□□□□ 0.38
IRX3-202ENST00000558054 PPP1R37O75864 691 aa17.44■□□□□ 0.38
IRX3-202ENST00000558054 KHSRPQ92945 711 aaKnown RBP eCLIP17.44■□□□□ 0.38
IRX3-202ENST00000558054 KIF3CO14782 793 aa17.43■□□□□ 0.38
IRX3-202ENST00000558054 CCDC88BA6NC98 1476 aa17.42■□□□□ 0.38
IRX3-202ENST00000558054 TOPBP1Q92547 1522 aa17.4■□□□□ 0.38
IRX3-202ENST00000558054 RIMBP3CA6NJZ7 1639 aa17.39■□□□□ 0.37
IRX3-202ENST00000558054 RIMBP3BA6NNM3 1639 aa17.39■□□□□ 0.37
IRX3-202ENST00000558054 RIMBP3Q9UFD9 1639 aa17.39■□□□□ 0.37
IRX3-202ENST00000558054 ZNF608Q9ULD9 1512 aaPredicted RBP17.37■□□□□ 0.37
IRX3-202ENST00000558054 ARHGEF11O15085 1522 aa17.34■□□□□ 0.37
IRX3-202ENST00000558054 DNMBPQ6XZF7 1577 aa17.34■□□□□ 0.37
IRX3-202ENST00000558054 ZNF687Q8N1G0 1237 aa17.34■□□□□ 0.37
IRX3-202ENST00000558054 EIF4G3O43432 1585 aaKnown RBP17.32■□□□□ 0.36
IRX3-202ENST00000558054 HS6ST3Q8IZP7 471 aa17.31■□□□□ 0.36
IRX3-202ENST00000558054 TMC2Q8TDI7 906 aa17.3■□□□□ 0.36
IRX3-202ENST00000558054 ZNF316A6NFI3 1004 aaPredicted RBP17.27■□□□□ 0.36
IRX3-202ENST00000558054 CHGAP10645 457 aaKnown RBP17.27■□□□□ 0.36
IRX3-202ENST00000558054 NUDT7P0C024 238 aa17.25■□□□□ 0.35
IRX3-202ENST00000558054 TARBP1Q13395 1621 aaKnown RBP17.23■□□□□ 0.35
IRX3-202ENST00000558054 CYB5RLQ6IPT4 315 aa17.23■□□□□ 0.35
IRX3-202ENST00000558054 AQRO60306 1485 aaKnown RBP eCLIP17.22■□□□□ 0.352e-6■■■■■ 28.8
IRX3-202ENST00000558054 CHD1O14646 1710 aa17.21■□□□□ 0.35
IRX3-202ENST00000558054 PCDHGA4Q9Y5G9 962 aa17.21■□□□□ 0.35
IRX3-202ENST00000558054 POLA1P09884 1462 aaPredicted RBP17.2■□□□□ 0.34
IRX3-202ENST00000558054 SLC34A2O95436 690 aa17.2■□□□□ 0.34
IRX3-202ENST00000558054 WDR97A6NE52 1622 aa17.18■□□□□ 0.34
IRX3-202ENST00000558054 SOGA1O94964 1423 aa17.15■□□□□ 0.34
IRX3-202ENST00000558054 NKX1-1Q15270 411 aaPredicted RBP17.15■□□□□ 0.34
IRX3-202ENST00000558054 LHX6Q9UPM6 363 aa17.15■□□□□ 0.34
IRX3-202ENST00000558054 ANKRD13DQ6ZTN6 518 aa17.12■□□□□ 0.33
IRX3-202ENST00000558054 ARAP1Q96P48 1450 aa17.12■□□□□ 0.33
IRX3-202ENST00000558054 RNF166Q96A37 237 aaPredicted RBP17.1■□□□□ 0.33
IRX3-202ENST00000558054 TDRD9Q8NDG6 1382 aaKnown RBP17.1■□□□□ 0.33
IRX3-202ENST00000558054 CHMP7Q8WUX9 453 aaPredicted RBP17.09■□□□□ 0.33
IRX3-202ENST00000558054 MYT1LQ9UL68 1186 aa17.09■□□□□ 0.33
IRX3-202ENST00000558054 RAD54L2Q9Y4B4 1467 aa17.09■□□□□ 0.33
IRX3-202ENST00000558054 SYNJ1O43426 1573 aa17.08■□□□□ 0.32
IRX3-202ENST00000558054 MAGI1Q96QZ7 1491 aaPredicted RBP17.08■□□□□ 0.32
IRX3-202ENST00000558054 FOXK1P85037 733 aa17.08■□□□□ 0.32
IRX3-202ENST00000558054 PLPP6Q8IY26 295 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms