RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 SETD1BQ9UPS6 1966 aaKnown RBP10.43□□□□□ -0.74
TRPM1-204ENST00000557948 KIAA0556O60303 1618 aa10.43□□□□□ -0.74
TRPM1-204ENST00000557948 HSPA1LP34931 641 aa10.42□□□□□ -0.74
TRPM1-204ENST00000557948 AKNAQ7Z591 1439 aa10.41□□□□□ -0.74
TRPM1-204ENST00000557948 ABCA9Q8IUA7 1624 aa10.41□□□□□ -0.74
TRPM1-204ENST00000557948 SIGLEC1Q9BZZ2 1709 aa10.41□□□□□ -0.74
TRPM1-204ENST00000557948 UGGT2Q9NYU1 1516 aa10.4□□□□□ -0.74
TRPM1-204ENST00000557948 MYCNP04198 464 aaPredicted RBP10.4□□□□□ -0.74
TRPM1-204ENST00000557948 KIF27Q86VH2 1401 aa10.4□□□□□ -0.75
TRPM1-204ENST00000557948 CARMIL1Q5VZK9 1371 aa10.39□□□□□ -0.75
TRPM1-204ENST00000557948 DCAF8L1A6NGE4 600 aa10.39□□□□□ -0.75
TRPM1-204ENST00000557948 CEBPAP49715 358 aaPredicted RBP10.39□□□□□ -0.75
TRPM1-204ENST00000557948 RICTORQ6R327 1708 aa10.38□□□□□ -0.75
TRPM1-204ENST00000557948 ZFYVE16Q7Z3T8 1539 aa10.37□□□□□ -0.75
TRPM1-204ENST00000557948 DENND4BO75064 1496 aaPredicted RBP10.36□□□□□ -0.75
TRPM1-204ENST00000557948 ABCA8O94911 1581 aa10.36□□□□□ -0.75
TRPM1-204ENST00000557948 PIP4K2BP78356 416 aa10.36□□□□□ -0.75
TRPM1-204ENST00000557948 EFCAB5A4FU69 1503 aa10.36□□□□□ -0.75
TRPM1-204ENST00000557948 ARHGEF12Q9NZN5 1544 aa10.35□□□□□ -0.75
TRPM1-204ENST00000557948 ZNF335Q9H4Z2 1342 aaPredicted RBP10.33□□□□□ -0.76
TRPM1-204ENST00000557948 ZMYM4Q5VZL5 1548 aa10.33□□□□□ -0.76
TRPM1-204ENST00000557948 NCOA1Q15788 1441 aa10.33□□□□□ -0.76
TRPM1-204ENST00000557948 FHOD3Q2V2M9 1422 aa10.33□□□□□ -0.76
TRPM1-204ENST00000557948 ARID3CA6NKF2 412 aa10.32□□□□□ -0.76
TRPM1-204ENST00000557948 MAGI2Q86UL8 1455 aa10.3□□□□□ -0.76
TRPM1-204ENST00000557948 TOM1O60784 492 aa10.3□□□□□ -0.76
TRPM1-204ENST00000557948 ATXN8OSP0DMR3 200 aa10.29□□□□□ -0.76
TRPM1-204ENST00000557948 CFAP74Q9C0B2 1584 aa10.29□□□□□ -0.76
TRPM1-204ENST00000557948 GOLGA3Q08378 1498 aa10.28□□□□□ -0.76
TRPM1-204ENST00000557948 C3P01024 1663 aa10.28□□□□□ -0.76
TRPM1-204ENST00000557948 CAMSAP1Q5T5Y3 1602 aa10.27□□□□□ -0.77
TRPM1-204ENST00000557948 FAM9AQ8IZU1 332 aaPredicted RBP10.27□□□□□ -0.77
TRPM1-204ENST00000557948 ATP10BO94823 1461 aa10.27□□□□□ -0.77
TRPM1-204ENST00000557948 HECW1Q76N89 1606 aa10.26□□□□□ -0.77
TRPM1-204ENST00000557948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.26□□□□□ -0.77
TRPM1-204ENST00000557948 C9orf84Q5VXU9 1444 aa10.25□□□□□ -0.77
TRPM1-204ENST00000557948 ATP10AO60312 1499 aa10.25□□□□□ -0.77
TRPM1-204ENST00000557948 RGS17Q9UGC6 210 aaPredicted RBP10.25□□□□□ -0.77
TRPM1-204ENST00000557948 TRAPPC8Q9Y2L5 1435 aa10.24□□□□□ -0.77
TRPM1-204ENST00000557948 NCKAP5LQ9HCH0 1330 aa10.24□□□□□ -0.77
TRPM1-204ENST00000557948 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.23□□□□□ -0.77
TRPM1-204ENST00000557948 HNRNPUL2Q1KMD3 747 aaKnown RBP10.23□□□□□ -0.77
TRPM1-204ENST00000557948 CTTNBP2Q8WZ74 1663 aa10.22□□□□□ -0.77
TRPM1-204ENST00000557948 ESF1Q9H501 851 aaKnown RBP10.22□□□□□ -0.77
TRPM1-204ENST00000557948 RAPGEF2Q9Y4G8 1499 aa10.22□□□□□ -0.77
TRPM1-204ENST00000557948 SETD1AO15047 1707 aaKnown RBP10.21□□□□□ -0.77
TRPM1-204ENST00000557948 SUPT6HQ7KZ85 1726 aaKnown RBP10.21□□□□□ -0.77
TRPM1-204ENST00000557948 ATF5Q9Y2D1 282 aaPredicted RBP10.21□□□□□ -0.77
TRPM1-204ENST00000557948 PKD2Q13563 968 aa10.2□□□□□ -0.78
TRPM1-204ENST00000557948 PTPRKQ15262 1439 aa10.19□□□□□ -0.78
TRPM1-204ENST00000557948 CPS1P31327 1500 aa10.18□□□□□ -0.78
TRPM1-204ENST00000557948 POTEAQ6S8J7 498 aa10.18□□□□□ -0.78
TRPM1-204ENST00000557948 U3KPZ7 1027 aaPredicted RBP10.18□□□□□ -0.78
TRPM1-204ENST00000557948 SCAPERQ9BY12 1400 aa10.16□□□□□ -0.78
TRPM1-204ENST00000557948 PLA2R1Q13018 1463 aa10.16□□□□□ -0.78
TRPM1-204ENST00000557948 SRCAPQ6ZRS2 3230 aa10.14□□□□□ -0.79
TRPM1-204ENST00000557948 RAPGEF6Q8TEU7 1601 aa10.14□□□□□ -0.79
TRPM1-204ENST00000557948 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.13□□□□□ -0.79
TRPM1-204ENST00000557948 TCOF1Q13428 1488 aaKnown RBP10.13□□□□□ -0.79
TRPM1-204ENST00000557948 NPATQ14207 1427 aa10.13□□□□□ -0.79
TRPM1-204ENST00000557948 ZNF142P52746 1687 aaPredicted RBP10.12□□□□□ -0.79
TRPM1-204ENST00000557948 ALKQ9UM73 1620 aa10.12□□□□□ -0.79
TRPM1-204ENST00000557948 PLEKHD1A6NEE1 506 aa10.12□□□□□ -0.79
TRPM1-204ENST00000557948 UPF1Q92900 1129 aaKnown RBP eCLIP10.12□□□□□ -0.79
TRPM1-204ENST00000557948 MYT1LQ9UL68 1186 aa10.12□□□□□ -0.79
TRPM1-204ENST00000557948 CNTLNQ9NXG0 1405 aa10.12□□□□□ -0.79
TRPM1-204ENST00000557948 SHANK2Q9UPX8 1470 aa10.11□□□□□ -0.79
TRPM1-204ENST00000557948 FKBP8Q14318 412 aa10.11□□□□□ -0.79
TRPM1-204ENST00000557948 P3H3Q8IVL6 736 aa10.11□□□□□ -0.79
TRPM1-204ENST00000557948 MYO3AQ8NEV4 1616 aa10.11□□□□□ -0.79
TRPM1-204ENST00000557948 AGLP35573 1532 aa10.1□□□□□ -0.79
TRPM1-204ENST00000557948 CEP170BQ9Y4F5 1589 aaPredicted RBP10.09□□□□□ -0.79
TRPM1-204ENST00000557948 REREQ9P2R6 1566 aa10.09□□□□□ -0.79
TRPM1-204ENST00000557948 DIP2CQ9Y2E4 1556 aa10.09□□□□□ -0.79
TRPM1-204ENST00000557948 MROH2AA6NES4 1674 aa10.09□□□□□ -0.79
TRPM1-204ENST00000557948 SUPT5HO00267 1087 aaKnown RBP10.08□□□□□ -0.8
TRPM1-204ENST00000557948 SAMD1Q6SPF0 538 aaPredicted RBP10.08□□□□□ -0.8
TRPM1-204ENST00000557948 ZNF518AQ6AHZ1 1483 aa10.08□□□□□ -0.8
TRPM1-204ENST00000557948 POLR1AO95602 1720 aaPredicted RBP10.07□□□□□ -0.8
TRPM1-204ENST00000557948 NUP153P49790 1475 aaKnown RBP10.06□□□□□ -0.8
TRPM1-204ENST00000557948 ABCA6Q8N139 1617 aa10.05□□□□□ -0.8
TRPM1-204ENST00000557948 RNF17Q9BXT8 1623 aaKnown RBP10.05□□□□□ -0.8
TRPM1-204ENST00000557948 PLCH2O75038 1416 aa10.05□□□□□ -0.8
TRPM1-204ENST00000557948 KDM5CP41229 1560 aa10.05□□□□□ -0.8
TRPM1-204ENST00000557948 ZMYM3Q14202 1370 aa10.04□□□□□ -0.8
TRPM1-204ENST00000557948 EFCAB2Q5VUJ9 269 aa10.03□□□□□ -0.8
TRPM1-204ENST00000557948 AFAP1Q8N556 730 aa10.03□□□□□ -0.8
TRPM1-204ENST00000557948 MYO5CQ9NQX4 1742 aa10.03□□□□□ -0.8
TRPM1-204ENST00000557948 VWDEQ8N2E2 1590 aa10.02□□□□□ -0.81
TRPM1-204ENST00000557948 NEURL4Q96JN8 1562 aa10.01□□□□□ -0.81
TRPM1-204ENST00000557948 DNMT1P26358 1616 aaKnown RBP10□□□□□ -0.81
TRPM1-204ENST00000557948 CLTCQ00610 1675 aaKnown RBP10□□□□□ -0.81
TRPM1-204ENST00000557948 TRIM52Q96A61 297 aa10□□□□□ -0.81
TRPM1-204ENST00000557948 A2ML1A8K2U0 1454 aa9.99□□□□□ -0.81
TRPM1-204ENST00000557948 MLH3Q9UHC1 1453 aa9.98□□□□□ -0.81
TRPM1-204ENST00000557948 LRRC7Q96NW7 1537 aa9.98□□□□□ -0.81
TRPM1-204ENST00000557948 SYNMO15061 1565 aa9.98□□□□□ -0.81
TRPM1-204ENST00000557948 SAMD9Q5K651 1589 aa9.98□□□□□ -0.81
TRPM1-204ENST00000557948 STRCP1A6NGW2 1772 aa9.97□□□□□ -0.81
TRPM1-204ENST00000557948 ANKLE2Q86XL3 938 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms