RNA–Protein interactions for RNA: ENST00000557764.5

TRAPPC6B-207, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 2

Gene TRAPPC6B, Length 870 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-207ENST00000557764 PRXQ9BXM0 1461 aa24.79■■□□□ 1.56
TRAPPC6B-207ENST00000557764 MAGI2Q86UL8 1455 aa24.77■■□□□ 1.56
TRAPPC6B-207ENST00000557764 CEBPAP49715 358 aaPredicted RBP24.77■■□□□ 1.56
TRAPPC6B-207ENST00000557764 HECW1Q76N89 1606 aa24.75■■□□□ 1.55
TRAPPC6B-207ENST00000557764 NUP153P49790 1475 aaKnown RBP24.75■■□□□ 1.55
TRAPPC6B-207ENST00000557764 ARHGEF12Q9NZN5 1544 aa24.75■■□□□ 1.55
TRAPPC6B-207ENST00000557764 SAMD9Q5K651 1589 aa24.74■■□□□ 1.55
TRAPPC6B-207ENST00000557764 PLEKHD1A6NEE1 506 aa24.73■■□□□ 1.55
TRAPPC6B-207ENST00000557764 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.71■■□□□ 1.55
TRAPPC6B-207ENST00000557764 UHRF1BP1Q6BDS2 1440 aa24.69■■□□□ 1.54
TRAPPC6B-207ENST00000557764 SETD1BQ9UPS6 1966 aaKnown RBP24.69■■□□□ 1.54
TRAPPC6B-207ENST00000557764 ATP10AO60312 1499 aa24.67■■□□□ 1.54
TRAPPC6B-207ENST00000557764 PTPRTO14522 1441 aa24.67■■□□□ 1.54
TRAPPC6B-207ENST00000557764 LTBP4Q8N2S1 1624 aa24.65■■□□□ 1.54
TRAPPC6B-207ENST00000557764 C9orf84Q5VXU9 1444 aa24.64■■□□□ 1.54
TRAPPC6B-207ENST00000557764 SCAPERQ9BY12 1400 aa24.64■■□□□ 1.54
TRAPPC6B-207ENST00000557764 IQSEC2Q5JU85 1478 aa24.61■■□□□ 1.53
TRAPPC6B-207ENST00000557764 RANGAP1P46060 587 aaPredicted RBP24.55■■□□□ 1.52
TRAPPC6B-207ENST00000557764 PLCH2O75038 1416 aa24.53■■□□□ 1.52
TRAPPC6B-207ENST00000557764 C3P01024 1663 aa24.53■■□□□ 1.52
TRAPPC6B-207ENST00000557764 NCOA1Q15788 1441 aa24.47■■□□□ 1.51
TRAPPC6B-207ENST00000557764 UBAP1LF5GYI3 381 aa24.47■■□□□ 1.51
TRAPPC6B-207ENST00000557764 EFCAB2Q5VUJ9 269 aa24.46■■□□□ 1.51
TRAPPC6B-207ENST00000557764 MYO5CQ9NQX4 1742 aa24.44■■□□□ 1.5
TRAPPC6B-207ENST00000557764 MYT1LQ9UL68 1186 aa24.44■■□□□ 1.5
TRAPPC6B-207ENST00000557764 CDK13Q14004 1512 aaKnown RBP24.44■■□□□ 1.5
TRAPPC6B-207ENST00000557764 TRAPPC8Q9Y2L5 1435 aa24.44■■□□□ 1.5
TRAPPC6B-207ENST00000557764 ZNF518AQ6AHZ1 1483 aa24.43■■□□□ 1.5
TRAPPC6B-207ENST00000557764 AFAP1Q8N556 730 aa24.42■■□□□ 1.5
TRAPPC6B-207ENST00000557764 ESF1Q9H501 851 aaKnown RBP24.42■■□□□ 1.5
TRAPPC6B-207ENST00000557764 DIP2CQ9Y2E4 1556 aa24.41■■□□□ 1.5
TRAPPC6B-207ENST00000557764 KDM5CP41229 1560 aa24.39■■□□□ 1.5
TRAPPC6B-207ENST00000557764 CSRNP3Q8WYN3 585 aa24.39■■□□□ 1.49
TRAPPC6B-207ENST00000557764 CAMSAP1Q5T5Y3 1602 aa24.39■■□□□ 1.49
TRAPPC6B-207ENST00000557764 ZNF335Q9H4Z2 1342 aaPredicted RBP24.38■■□□□ 1.49
TRAPPC6B-207ENST00000557764 REREQ9P2R6 1566 aa24.38■■□□□ 1.49
TRAPPC6B-207ENST00000557764 ABCA6Q8N139 1617 aa24.35■■□□□ 1.49
TRAPPC6B-207ENST00000557764 NCKAP5LQ9HCH0 1330 aa24.35■■□□□ 1.49
TRAPPC6B-207ENST00000557764 MED1Q15648 1581 aaPredicted RBP24.33■■□□□ 1.48
TRAPPC6B-207ENST00000557764 AGLP35573 1532 aa24.31■■□□□ 1.48
TRAPPC6B-207ENST00000557764 ARHGAP5Q13017 1502 aa24.31■■□□□ 1.48
TRAPPC6B-207ENST00000557764 KIF14Q15058 1648 aa24.29■■□□□ 1.48
TRAPPC6B-207ENST00000557764 CNTLNQ9NXG0 1405 aa24.28■■□□□ 1.48
TRAPPC6B-207ENST00000557764 MLH3Q9UHC1 1453 aa24.28■■□□□ 1.48
TRAPPC6B-207ENST00000557764 HSPA1LP34931 641 aa24.27■■□□□ 1.48
TRAPPC6B-207ENST00000557764 ATP1B4Q9UN42 357 aaPredicted RBP24.27■■□□□ 1.48
TRAPPC6B-207ENST00000557764 SCAF1Q9H7N4 1312 aaKnown RBP24.25■■□□□ 1.47
TRAPPC6B-207ENST00000557764 NPATQ14207 1427 aa24.25■■□□□ 1.47
TRAPPC6B-207ENST00000557764 SUPT6HQ7KZ85 1726 aaKnown RBP24.22■■□□□ 1.47
TRAPPC6B-207ENST00000557764 CDK11AQ9UQ88 783 aaPredicted RBP24.22■■□□□ 1.47
TRAPPC6B-207ENST00000557764 MROH2AA6NES4 1674 aa24.21■■□□□ 1.47
TRAPPC6B-207ENST00000557764 PIP4K2BP78356 416 aa24.21■■□□□ 1.47
TRAPPC6B-207ENST00000557764 PKD2Q13563 968 aa24.21■■□□□ 1.47
TRAPPC6B-207ENST00000557764 CDC42BPBQ9Y5S2 1711 aa24.19■■□□□ 1.46
TRAPPC6B-207ENST00000557764 ZMYM3Q14202 1370 aa24.18■■□□□ 1.46
TRAPPC6B-207ENST00000557764 PLA2R1Q13018 1463 aa24.18■■□□□ 1.46
TRAPPC6B-207ENST00000557764 KIDINS220Q9ULH0 1771 aa24.17■■□□□ 1.46
TRAPPC6B-207ENST00000557764 ZNF142P52746 1687 aaPredicted RBP24.16■■□□□ 1.46
TRAPPC6B-207ENST00000557764 TROQ12816 1431 aaPredicted RBP24.16■■□□□ 1.46
TRAPPC6B-207ENST00000557764 TCOF1Q13428 1488 aaKnown RBP24.15■■□□□ 1.46
TRAPPC6B-207ENST00000557764 MYO3AQ8NEV4 1616 aa24.15■■□□□ 1.46
TRAPPC6B-207ENST00000557764 PPP6R1Q9UPN7 881 aa24.15■■□□□ 1.46
TRAPPC6B-207ENST00000557764 ITSN2Q9NZM3 1697 aa24.14■■□□□ 1.45
TRAPPC6B-207ENST00000557764 TOM1O60784 492 aa24.13■■□□□ 1.45
TRAPPC6B-207ENST00000557764 ABCC1P33527 1531 aa24.13■■□□□ 1.45
TRAPPC6B-207ENST00000557764 CEP170BQ9Y4F5 1589 aaPredicted RBP24.12■■□□□ 1.45
TRAPPC6B-207ENST00000557764 CLIP1P30622 1438 aa24.12■■□□□ 1.45
TRAPPC6B-207ENST00000557764 CLTCQ00610 1675 aaKnown RBP24.1■■□□□ 1.45
TRAPPC6B-207ENST00000557764 FMN1Q68DA7 1419 aa24.1■■□□□ 1.45
TRAPPC6B-207ENST00000557764 PREX2Q70Z35 1606 aa24.08■■□□□ 1.45
TRAPPC6B-207ENST00000557764 FOXD1Q16676 465 aa24.06■■□□□ 1.44
TRAPPC6B-207ENST00000557764 EEA1Q15075 1411 aa24.06■■□□□ 1.44
TRAPPC6B-207ENST00000557764 PTPRKQ15262 1439 aa24.04■■□□□ 1.44
TRAPPC6B-207ENST00000557764 CPS1P31327 1500 aa24.04■■□□□ 1.44
TRAPPC6B-207ENST00000557764 LRRIQ1Q96JM4 1722 aa24.04■■□□□ 1.44
TRAPPC6B-207ENST00000557764 SAMD9LQ8IVG5 1584 aa24.01■■□□□ 1.43
TRAPPC6B-207ENST00000557764 SHANK2Q9UPX8 1470 aa24■■□□□ 1.43
TRAPPC6B-207ENST00000557764 DNMT1P26358 1616 aaKnown RBP23.98■■□□□ 1.43
TRAPPC6B-207ENST00000557764 POLR1AO95602 1720 aaPredicted RBP23.98■■□□□ 1.43
TRAPPC6B-207ENST00000557764 CDC42BPAQ5VT25 1732 aa23.97■■□□□ 1.43
TRAPPC6B-207ENST00000557764 ARHGAP35Q9NRY4 1499 aa23.96■■□□□ 1.43
TRAPPC6B-207ENST00000557764 SPAG9O60271 1321 aaKnown RBP23.96■■□□□ 1.43
TRAPPC6B-207ENST00000557764 A2ML1A8K2U0 1454 aa23.95■■□□□ 1.42
TRAPPC6B-207ENST00000557764 GGT6Q6P531 493 aa23.95■■□□□ 1.42
TRAPPC6B-207ENST00000557764 ALKQ9UM73 1620 aa23.94■■□□□ 1.42
TRAPPC6B-207ENST00000557764 NEURL4Q96JN8 1562 aa23.94■■□□□ 1.42
TRAPPC6B-207ENST00000557764 ZNF777Q9ULD5 760 aaPredicted RBP23.93■■□□□ 1.42
TRAPPC6B-207ENST00000557764 PLXNC1O60486 1568 aa23.91■■□□□ 1.42
TRAPPC6B-207ENST00000557764 SYCP2Q9BX26 1530 aa23.9■■□□□ 1.42
TRAPPC6B-207ENST00000557764 A2MP01023 1474 aa23.9■■□□□ 1.42
TRAPPC6B-207ENST00000557764 EHMT2Q96KQ7 1210 aa23.9■■□□□ 1.42
TRAPPC6B-207ENST00000557764 ATP7AQ04656 1500 aa23.89■■□□□ 1.42
TRAPPC6B-207ENST00000557764 HNRNPMP52272 730 aaKnown RBP eCLIP23.89■■□□□ 1.41
TRAPPC6B-207ENST00000557764 VWDEQ8N2E2 1590 aa23.88■■□□□ 1.41
TRAPPC6B-207ENST00000557764 UBTFP17480 764 aaKnown RBP23.88■■□□□ 1.41
TRAPPC6B-207ENST00000557764 RGS17Q9UGC6 210 aaPredicted RBP23.87■■□□□ 1.41
TRAPPC6B-207ENST00000557764 INO80Q9ULG1 1556 aaPredicted RBP23.85■■□□□ 1.41
TRAPPC6B-207ENST00000557764 ANKLE2Q86XL3 938 aa23.82■■□□□ 1.4
TRAPPC6B-207ENST00000557764 CCDC18Q5T9S5 1454 aa23.81■■□□□ 1.4
TRAPPC6B-207ENST00000557764 TNRQ92752 1358 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms