RNA–Protein interactions for RNA: ENST00000557559.1

PRKCH-225, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-225ENST00000557559 HSPA2P54652 639 aa12.45□□□□□ -0.42
PRKCH-225ENST00000557559 YEATS2Q9ULM3 1422 aa12.44□□□□□ -0.42
PRKCH-225ENST00000557559 HECW1Q76N89 1606 aa12.44□□□□□ -0.42
PRKCH-225ENST00000557559 SIGLEC1Q9BZZ2 1709 aa12.43□□□□□ -0.42
PRKCH-225ENST00000557559 ARHGEF12Q9NZN5 1544 aa12.42□□□□□ -0.42
PRKCH-225ENST00000557559 C9orf84Q5VXU9 1444 aa12.42□□□□□ -0.42
PRKCH-225ENST00000557559 EEA1Q15075 1411 aa12.41□□□□□ -0.42
PRKCH-225ENST00000557559 CSRNP3Q8WYN3 585 aa12.4□□□□□ -0.42
PRKCH-225ENST00000557559 DMRT2Q9Y5R5 561 aa12.4□□□□□ -0.42
PRKCH-225ENST00000557559 ATP10AO60312 1499 aa12.4□□□□□ -0.43
PRKCH-225ENST00000557559 DISP3Q9P2K9 1392 aa12.39□□□□□ -0.43
PRKCH-225ENST00000557559 PLCH2O75038 1416 aa12.38□□□□□ -0.43
PRKCH-225ENST00000557559 SCAPERQ9BY12 1400 aa12.38□□□□□ -0.43
PRKCH-225ENST00000557559 MYO5CQ9NQX4 1742 aa12.38□□□□□ -0.43
PRKCH-225ENST00000557559 UHRF1BP1Q6BDS2 1440 aa12.37□□□□□ -0.43
PRKCH-225ENST00000557559 MLECQ14165 292 aa12.37□□□□□ -0.43
PRKCH-225ENST00000557559 ZNF518AQ6AHZ1 1483 aa12.37□□□□□ -0.43
PRKCH-225ENST00000557559 SPATA31D1Q6ZQQ2 1576 aa12.36□□□□□ -0.43
PRKCH-225ENST00000557559 SOCS7O14512 581 aa12.35□□□□□ -0.43
PRKCH-225ENST00000557559 CDK13Q14004 1512 aaKnown RBP12.35□□□□□ -0.43
PRKCH-225ENST00000557559 KIF14Q15058 1648 aa12.34□□□□□ -0.43
PRKCH-225ENST00000557559 KDM5CP41229 1560 aa12.34□□□□□ -0.43
PRKCH-225ENST00000557559 REREQ9P2R6 1566 aa12.34□□□□□ -0.43
PRKCH-225ENST00000557559 STRCQ7RTU9 1775 aa12.33□□□□□ -0.44
PRKCH-225ENST00000557559 IQSEC2Q5JU85 1478 aa12.33□□□□□ -0.44
PRKCH-225ENST00000557559 RANGAP1P46060 587 aaPredicted RBP12.32□□□□□ -0.44
PRKCH-225ENST00000557559 EFCAB2Q5VUJ9 269 aa12.32□□□□□ -0.44
PRKCH-225ENST00000557559 PTPRTO14522 1441 aa12.31□□□□□ -0.44
PRKCH-225ENST00000557559 FMN1Q68DA7 1419 aa12.31□□□□□ -0.44
PRKCH-225ENST00000557559 DIP2CQ9Y2E4 1556 aa12.3□□□□□ -0.44
PRKCH-225ENST00000557559 SETD1BQ9UPS6 1966 aaKnown RBP12.3□□□□□ -0.44
PRKCH-225ENST00000557559 MSH5O43196 834 aa12.3□□□□□ -0.44
PRKCH-225ENST00000557559 CDK11AQ9UQ88 783 aaPredicted RBP12.3□□□□□ -0.44
PRKCH-225ENST00000557559 ARHGAP5Q13017 1502 aa12.3□□□□□ -0.44
PRKCH-225ENST00000557559 CLIP1P30622 1438 aa12.28□□□□□ -0.44
PRKCH-225ENST00000557559 ILDR2Q71H61 639 aa12.28□□□□□ -0.44
PRKCH-225ENST00000557559 C3P01024 1663 aa12.28□□□□□ -0.44
PRKCH-225ENST00000557559 AGLP35573 1532 aa12.27□□□□□ -0.44
PRKCH-225ENST00000557559 CEBPAP49715 358 aaPredicted RBP12.27□□□□□ -0.45
PRKCH-225ENST00000557559 ESF1Q9H501 851 aaKnown RBP12.27□□□□□ -0.45
PRKCH-225ENST00000557559 ABCA6Q8N139 1617 aa12.26□□□□□ -0.45
PRKCH-225ENST00000557559 TROQ12816 1431 aaPredicted RBP12.26□□□□□ -0.45
PRKCH-225ENST00000557559 CNTLNQ9NXG0 1405 aa12.26□□□□□ -0.45
PRKCH-225ENST00000557559 MLH3Q9UHC1 1453 aa12.26□□□□□ -0.45
PRKCH-225ENST00000557559 TRAPPC8Q9Y2L5 1435 aa12.25□□□□□ -0.45
PRKCH-225ENST00000557559 LTBP4Q8N2S1 1624 aa12.25□□□□□ -0.45
PRKCH-225ENST00000557559 NCOA1Q15788 1441 aa12.24□□□□□ -0.45
PRKCH-225ENST00000557559 PREX2Q70Z35 1606 aa12.24□□□□□ -0.45
PRKCH-225ENST00000557559 MYT1LQ9UL68 1186 aa12.24□□□□□ -0.45
PRKCH-225ENST00000557559 MROH2AA6NES4 1674 aa12.23□□□□□ -0.45
PRKCH-225ENST00000557559 ABCC1P33527 1531 aa12.23□□□□□ -0.45
PRKCH-225ENST00000557559 ITSN2Q9NZM3 1697 aa12.22□□□□□ -0.45
PRKCH-225ENST00000557559 NPATQ14207 1427 aa12.21□□□□□ -0.45
PRKCH-225ENST00000557559 CDC42BPBQ9Y5S2 1711 aa12.21□□□□□ -0.45
PRKCH-225ENST00000557559 AFAP1Q8N556 730 aa12.21□□□□□ -0.45
PRKCH-225ENST00000557559 ATP1B4Q9UN42 357 aaPredicted RBP12.21□□□□□ -0.45
PRKCH-225ENST00000557559 CCDC18Q5T9S5 1454 aa12.19□□□□□ -0.46
PRKCH-225ENST00000557559 ARHGAP35Q9NRY4 1499 aa12.19□□□□□ -0.46
PRKCH-225ENST00000557559 ZNF142P52746 1687 aaPredicted RBP12.19□□□□□ -0.46
PRKCH-225ENST00000557559 CAMSAP1Q5T5Y3 1602 aa12.19□□□□□ -0.46
PRKCH-225ENST00000557559 KIDINS220Q9ULH0 1771 aa12.18□□□□□ -0.46
PRKCH-225ENST00000557559 PLA2R1Q13018 1463 aa12.16□□□□□ -0.46
PRKCH-225ENST00000557559 LRRIQ1Q96JM4 1722 aa12.16□□□□□ -0.46
PRKCH-225ENST00000557559 MYO3AQ8NEV4 1616 aa12.15□□□□□ -0.46
PRKCH-225ENST00000557559 SUPT6HQ7KZ85 1726 aaKnown RBP12.14□□□□□ -0.47
PRKCH-225ENST00000557559 UBTFP17480 764 aaKnown RBP12.14□□□□□ -0.47
PRKCH-225ENST00000557559 CDC42BPAQ5VT25 1732 aa12.14□□□□□ -0.47
PRKCH-225ENST00000557559 SAMD9LQ8IVG5 1584 aa12.13□□□□□ -0.47
PRKCH-225ENST00000557559 CEP170BQ9Y4F5 1589 aaPredicted RBP12.13□□□□□ -0.47
PRKCH-225ENST00000557559 PKD2Q13563 968 aa12.12□□□□□ -0.47
PRKCH-225ENST00000557559 CASKIN1Q8WXD9 1431 aa12.11□□□□□ -0.47
PRKCH-225ENST00000557559 PLXNC1O60486 1568 aa12.11□□□□□ -0.47
PRKCH-225ENST00000557559 TCOF1Q13428 1488 aaKnown RBP12.11□□□□□ -0.47
PRKCH-225ENST00000557559 UBAP1LF5GYI3 381 aa12.11□□□□□ -0.47
PRKCH-225ENST00000557559 ATP7AQ04656 1500 aa12.11□□□□□ -0.47
PRKCH-225ENST00000557559 SYCP2Q9BX26 1530 aa12.11□□□□□ -0.47
PRKCH-225ENST00000557559 CLTCQ00610 1675 aaKnown RBP12.1□□□□□ -0.47
PRKCH-225ENST00000557559 ZMYM3Q14202 1370 aa12.1□□□□□ -0.47
PRKCH-225ENST00000557559 ZNF335Q9H4Z2 1342 aaPredicted RBP12.1□□□□□ -0.47
PRKCH-225ENST00000557559 INO80Q9ULG1 1556 aaPredicted RBP12.09□□□□□ -0.47
PRKCH-225ENST00000557559 PLEKHH2Q8IVE3 1493 aa12.09□□□□□ -0.47
PRKCH-225ENST00000557559 SPAG9O60271 1321 aaKnown RBP12.09□□□□□ -0.47
PRKCH-225ENST00000557559 FYCO1Q9BQS8 1478 aa12.08□□□□□ -0.47
PRKCH-225ENST00000557559 A2MP01023 1474 aa12.07□□□□□ -0.48
PRKCH-225ENST00000557559 NCKAP5LQ9HCH0 1330 aa12.07□□□□□ -0.48
PRKCH-225ENST00000557559 ADGBQ8N7X0 1667 aa12.06□□□□□ -0.48
PRKCH-225ENST00000557559 CPS1P31327 1500 aa12.06□□□□□ -0.48
PRKCH-225ENST00000557559 MED1Q15648 1581 aaPredicted RBP12.06□□□□□ -0.48
PRKCH-225ENST00000557559 PTPRKQ15262 1439 aa12.06□□□□□ -0.48
PRKCH-225ENST00000557559 KIAA1107Q9UPP5 1409 aa12.06□□□□□ -0.48
PRKCH-225ENST00000557559 A2ML1A8K2U0 1454 aa12.05□□□□□ -0.48
PRKCH-225ENST00000557559 POLR1AO95602 1720 aaPredicted RBP12.05□□□□□ -0.48
PRKCH-225ENST00000557559 FAM135AQ9P2D6 1515 aa12.05□□□□□ -0.48
PRKCH-225ENST00000557559 GPATCH8Q9UKJ3 1502 aaKnown RBP12.03□□□□□ -0.48
PRKCH-225ENST00000557559 ZNF777Q9ULD5 760 aaPredicted RBP12.03□□□□□ -0.48
PRKCH-225ENST00000557559 DNMT1P26358 1616 aaKnown RBP12.03□□□□□ -0.48
PRKCH-225ENST00000557559 EHMT2Q96KQ7 1210 aa12.02□□□□□ -0.49
PRKCH-225ENST00000557559 TOM1O60784 492 aa12.01□□□□□ -0.49
PRKCH-225ENST00000557559 SCAF1Q9H7N4 1312 aaKnown RBP12.01□□□□□ -0.49
PRKCH-225ENST00000557559 GGT6Q6P531 493 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms