RNA–Protein interactions for RNA: ENST00000557370.2

MTHFD1-215, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-215ENST00000557370 MED1Q15648 1581 aaPredicted RBP10.78□□□□□ -0.68
MTHFD1-215ENST00000557370 DIEXFQ68CQ4 756 aaKnown RBP10.78□□□□□ -0.68
MTHFD1-215ENST00000557370 IQSEC2Q5JU85 1478 aa10.78□□□□□ -0.68
MTHFD1-215ENST00000557370 PREX1Q8TCU6 1659 aa10.77□□□□□ -0.69
MTHFD1-215ENST00000557370 FANCAO15360 1455 aa10.77□□□□□ -0.69
MTHFD1-215ENST00000557370 ZNF316A6NFI3 1004 aaPredicted RBP10.77□□□□□ -0.69
MTHFD1-215ENST00000557370 MLECQ14165 292 aa10.77□□□□□ -0.69
MTHFD1-215ENST00000557370 PHLDB1Q86UU1 1377 aa10.77□□□□□ -0.69
MTHFD1-215ENST00000557370 MAP3K1Q13233 1512 aa10.76□□□□□ -0.69
MTHFD1-215ENST00000557370 ARHGEF40Q8TER5 1519 aa10.75□□□□□ -0.69
MTHFD1-215ENST00000557370 DISP1Q96F81 1524 aa10.74□□□□□ -0.69
MTHFD1-215ENST00000557370 FER1L4A9Z1Z3 1794 aa10.74□□□□□ -0.69
MTHFD1-215ENST00000557370 STRCQ7RTU9 1775 aa10.74□□□□□ -0.69
MTHFD1-215ENST00000557370 UHRF1BP1Q6BDS2 1440 aa10.73□□□□□ -0.69
MTHFD1-215ENST00000557370 IGF1RP08069 1367 aa10.72□□□□□ -0.69
MTHFD1-215ENST00000557370 PTPRTO14522 1441 aa10.72□□□□□ -0.69
MTHFD1-215ENST00000557370 TTC37Q6PGP7 1564 aa10.71□□□□□ -0.69
MTHFD1-215ENST00000557370 AKNAQ7Z591 1439 aa10.71□□□□□ -0.69
MTHFD1-215ENST00000557370 LTBP4Q8N2S1 1624 aa10.71□□□□□ -0.69
MTHFD1-215ENST00000557370 ACIN1Q9UKV3 1341 aaKnown RBP10.71□□□□□ -0.69
MTHFD1-215ENST00000557370 KIAA0556O60303 1618 aa10.7□□□□□ -0.7
MTHFD1-215ENST00000557370 FRMPD1Q5SYB0 1578 aa10.69□□□□□ -0.7
MTHFD1-215ENST00000557370 NEO1Q92859 1461 aa10.69□□□□□ -0.7
MTHFD1-215ENST00000557370 RRBP1Q9P2E9 1410 aaKnown RBP10.69□□□□□ -0.7
MTHFD1-215ENST00000557370 CARMIL1Q5VZK9 1371 aa10.69□□□□□ -0.7
MTHFD1-215ENST00000557370 ARID3CA6NKF2 412 aa10.67□□□□□ -0.7
MTHFD1-215ENST00000557370 HSPA1LP34931 641 aa10.67□□□□□ -0.7
MTHFD1-215ENST00000557370 CEBPAP49715 358 aaPredicted RBP10.67□□□□□ -0.7
MTHFD1-215ENST00000557370 PIP4K2BP78356 416 aa10.67□□□□□ -0.7
MTHFD1-215ENST00000557370 HOXD11P31277 338 aaPredicted RBP10.66□□□□□ -0.7
MTHFD1-215ENST00000557370 UGGT2Q9NYU1 1516 aa10.66□□□□□ -0.7
MTHFD1-215ENST00000557370 POTEHQ6S545 545 aa10.65□□□□□ -0.7
MTHFD1-215ENST00000557370 DENND4BO75064 1496 aaPredicted RBP10.65□□□□□ -0.7
MTHFD1-215ENST00000557370 ABCA9Q8IUA7 1624 aa10.65□□□□□ -0.7
MTHFD1-215ENST00000557370 EFCAB5A4FU69 1503 aa10.64□□□□□ -0.71
MTHFD1-215ENST00000557370 ZFYVE16Q7Z3T8 1539 aa10.63□□□□□ -0.71
MTHFD1-215ENST00000557370 HNRNPUL2Q1KMD3 747 aaKnown RBP10.63□□□□□ -0.71
MTHFD1-215ENST00000557370 ARHGAP35Q9NRY4 1499 aa10.62□□□□□ -0.71
MTHFD1-215ENST00000557370 ABCA8O94911 1581 aa10.61□□□□□ -0.71
MTHFD1-215ENST00000557370 CCNB3Q8WWL7 1395 aa10.61□□□□□ -0.71
MTHFD1-215ENST00000557370 ZNF335Q9H4Z2 1342 aaPredicted RBP10.6□□□□□ -0.71
MTHFD1-215ENST00000557370 RICTORQ6R327 1708 aa10.6□□□□□ -0.71
MTHFD1-215ENST00000557370 SETD1BQ9UPS6 1966 aaKnown RBP10.59□□□□□ -0.71
MTHFD1-215ENST00000557370 TIAM1Q13009 1591 aa10.59□□□□□ -0.71
MTHFD1-215ENST00000557370 ARHGEF12Q9NZN5 1544 aa10.58□□□□□ -0.72
MTHFD1-215ENST00000557370 SIGLEC1Q9BZZ2 1709 aa10.58□□□□□ -0.72
MTHFD1-215ENST00000557370 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.58□□□□□ -0.72
MTHFD1-215ENST00000557370 TOM1O60784 492 aa10.58□□□□□ -0.72
MTHFD1-215ENST00000557370 ESF1Q9H501 851 aaKnown RBP10.58□□□□□ -0.72
MTHFD1-215ENST00000557370 NCOA1Q15788 1441 aa10.58□□□□□ -0.72
MTHFD1-215ENST00000557370 FHOD3Q2V2M9 1422 aa10.58□□□□□ -0.72
MTHFD1-215ENST00000557370 DHX57Q6P158 1386 aaKnown RBP10.57□□□□□ -0.72
MTHFD1-215ENST00000557370 TIMELESSQ9UNS1 1208 aa10.57□□□□□ -0.72
MTHFD1-215ENST00000557370 ZMYM4Q5VZL5 1548 aa10.57□□□□□ -0.72
MTHFD1-215ENST00000557370 CFAP74Q9C0B2 1584 aa10.56□□□□□ -0.72
MTHFD1-215ENST00000557370 MAGI2Q86UL8 1455 aa10.55□□□□□ -0.72
MTHFD1-215ENST00000557370 NEUROD1Q13562 356 aa10.54□□□□□ -0.72
MTHFD1-215ENST00000557370 FYCO1Q9BQS8 1478 aa10.54□□□□□ -0.72
MTHFD1-215ENST00000557370 C9orf84Q5VXU9 1444 aa10.53□□□□□ -0.72
MTHFD1-215ENST00000557370 ATP10BO94823 1461 aa10.53□□□□□ -0.72
MTHFD1-215ENST00000557370 LRRC9Q6ZRR7 1453 aa10.53□□□□□ -0.72
MTHFD1-215ENST00000557370 CAMSAP1Q5T5Y3 1602 aa10.52□□□□□ -0.73
MTHFD1-215ENST00000557370 NCKAP5LQ9HCH0 1330 aa10.52□□□□□ -0.73
MTHFD1-215ENST00000557370 HECW1Q76N89 1606 aa10.51□□□□□ -0.73
MTHFD1-215ENST00000557370 CTTNBP2Q8WZ74 1663 aa10.51□□□□□ -0.73
MTHFD1-215ENST00000557370 ATP10AO60312 1499 aa10.51□□□□□ -0.73
MTHFD1-215ENST00000557370 MYT1LQ9UL68 1186 aa10.51□□□□□ -0.73
MTHFD1-215ENST00000557370 FMN1Q68DA7 1419 aa10.5□□□□□ -0.73
MTHFD1-215ENST00000557370 KANK4Q5T7N3 995 aaPredicted RBP10.5□□□□□ -0.73
MTHFD1-215ENST00000557370 CASKIN1Q8WXD9 1431 aa10.5□□□□□ -0.73
MTHFD1-215ENST00000557370 TRAPPC8Q9Y2L5 1435 aa10.5□□□□□ -0.73
MTHFD1-215ENST00000557370 MYT1Q01538 1121 aa10.49□□□□□ -0.73
MTHFD1-215ENST00000557370 C3P01024 1663 aa10.49□□□□□ -0.73
MTHFD1-215ENST00000557370 SETD5Q9C0A6 1442 aa10.49□□□□□ -0.73
MTHFD1-215ENST00000557370 RANGAP1P46060 587 aaPredicted RBP10.48□□□□□ -0.73
MTHFD1-215ENST00000557370 GTF3C3Q9Y5Q9 886 aa10.48□□□□□ -0.73
MTHFD1-215ENST00000557370 PKD2Q13563 968 aa10.46□□□□□ -0.73
MTHFD1-215ENST00000557370 PTPRKQ15262 1439 aa10.45□□□□□ -0.74
MTHFD1-215ENST00000557370 SCAPERQ9BY12 1400 aa10.45□□□□□ -0.74
MTHFD1-215ENST00000557370 RGS17Q9UGC6 210 aaPredicted RBP10.45□□□□□ -0.74
MTHFD1-215ENST00000557370 P3H3Q8IVL6 736 aa10.44□□□□□ -0.74
MTHFD1-215ENST00000557370 MIER1Q8N108 512 aa10.44□□□□□ -0.74
MTHFD1-215ENST00000557370 SUPT6HQ7KZ85 1726 aaKnown RBP10.44□□□□□ -0.74
MTHFD1-215ENST00000557370 RAB3GAP2Q9H2M9 1393 aa10.43□□□□□ -0.74
MTHFD1-215ENST00000557370 SETD1AO15047 1707 aaKnown RBP10.43□□□□□ -0.74
MTHFD1-215ENST00000557370 CPS1P31327 1500 aa10.43□□□□□ -0.74
MTHFD1-215ENST00000557370 PLEKHD1A6NEE1 506 aa10.42□□□□□ -0.74
MTHFD1-215ENST00000557370 RNF216Q9NWF9 866 aaPredicted RBP10.42□□□□□ -0.74
MTHFD1-215ENST00000557370 POTEAQ6S8J7 498 aa10.41□□□□□ -0.74
MTHFD1-215ENST00000557370 RAPGEF6Q8TEU7 1601 aa10.4□□□□□ -0.74
MTHFD1-215ENST00000557370 SAMD9Q5K651 1589 aa10.4□□□□□ -0.74
MTHFD1-215ENST00000557370 PLA2R1Q13018 1463 aa10.4□□□□□ -0.74
MTHFD1-215ENST00000557370 CNTLNQ9NXG0 1405 aa10.4□□□□□ -0.75
MTHFD1-215ENST00000557370 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.38□□□□□ -0.75
MTHFD1-215ENST00000557370 CCDC18Q5T9S5 1454 aa10.38□□□□□ -0.75
MTHFD1-215ENST00000557370 NPATQ14207 1427 aa10.38□□□□□ -0.75
MTHFD1-215ENST00000557370 PPP4R3CPQ6ZMV5 832 aa10.37□□□□□ -0.75
MTHFD1-215ENST00000557370 EHBP1L1Q8N3D4 1523 aa10.37□□□□□ -0.75
MTHFD1-215ENST00000557370 TCOF1Q13428 1488 aaKnown RBP10.36□□□□□ -0.75
MTHFD1-215ENST00000557370 ZNF518AQ6AHZ1 1483 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms