RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 MSH5O43196 834 aa17.51■□□□□ 0.39
APEX1-216ENST00000557159 NPM1P06748 294 aaKnown RBP eCLIP17.51■□□□□ 0.39
APEX1-216ENST00000557159 HECW1Q76N89 1606 aa17.51■□□□□ 0.39
APEX1-216ENST00000557159 ARID3CA6NKF2 412 aa17.51■□□□□ 0.39
APEX1-216ENST00000557159 CCDC18Q5T9S5 1454 aa17.5■□□□□ 0.39
APEX1-216ENST00000557159 EPRSP07814 1512 aaKnown RBP17.49■□□□□ 0.39
APEX1-216ENST00000557159 MTUS2Q5JR59 1369 aa17.48■□□□□ 0.39
APEX1-216ENST00000557159 ZCCHC11Q5TAX3 1644 aaKnown RBP17.46■□□□□ 0.39
APEX1-216ENST00000557159 CDK13Q14004 1512 aaKnown RBP17.45■□□□□ 0.38
APEX1-216ENST00000557159 SIN3AQ96ST3 1273 aa17.45■□□□□ 0.38
APEX1-216ENST00000557159 CDK11AQ9UQ88 783 aaPredicted RBP17.45■□□□□ 0.38
APEX1-216ENST00000557159 LRRIQ1Q96JM4 1722 aa17.45■□□□□ 0.38
APEX1-216ENST00000557159 FAM50AQ14320 339 aaKnown RBP17.44■□□□□ 0.38
APEX1-216ENST00000557159 EHBP1L1Q8N3D4 1523 aa17.44■□□□□ 0.38
APEX1-216ENST00000557159 ITGAEP38570 1179 aa17.43■□□□□ 0.38
APEX1-216ENST00000557159 TRIM52Q96A61 297 aa17.43■□□□□ 0.38
APEX1-216ENST00000557159 SUPT6HQ7KZ85 1726 aaKnown RBP17.42■□□□□ 0.38
APEX1-216ENST00000557159 FGD6Q6ZV73 1430 aa17.42■□□□□ 0.38
APEX1-216ENST00000557159 ASXL2Q76L83 1435 aa17.42■□□□□ 0.38
APEX1-216ENST00000557159 PLEKHD1A6NEE1 506 aa17.41■□□□□ 0.38
APEX1-216ENST00000557159 MYOM3Q5VTT5 1437 aa17.38■□□□□ 0.37
APEX1-216ENST00000557159 NCOA2Q15596 1464 aa17.37■□□□□ 0.37
APEX1-216ENST00000557159 WDR7Q9Y4E6 1490 aa17.37■□□□□ 0.37
APEX1-216ENST00000557159 TONSLQ96HA7 1378 aa17.36■□□□□ 0.37
APEX1-216ENST00000557159 ERICH6Q7L0X2 663 aa17.35■□□□□ 0.37
APEX1-216ENST00000557159 HFM1A2PYH4 1435 aa17.35■□□□□ 0.37
APEX1-216ENST00000557159 PPP4R2Q9NY27 417 aa17.35■□□□□ 0.37
APEX1-216ENST00000557159 MAGI3Q5TCQ9 1506 aa17.34■□□□□ 0.37
APEX1-216ENST00000557159 TROQ12816 1431 aaPredicted RBP17.34■□□□□ 0.37
APEX1-216ENST00000557159 ILDR1Q86SU0 546 aaPredicted RBP17.34■□□□□ 0.37
APEX1-216ENST00000557159 ABCC10Q5T3U5 1492 aa17.31■□□□□ 0.36
APEX1-216ENST00000557159 PTPN23Q9H3S7 1636 aa17.31■□□□□ 0.36
APEX1-216ENST00000557159 MIA2Q96PC5 1412 aa17.29■□□□□ 0.36
APEX1-216ENST00000557159 HNRNPUQ00839 825 aaKnown RBP eCLIP17.28■□□□□ 0.36
APEX1-216ENST00000557159 FAM69CQ0P6D2 419 aa17.27■□□□□ 0.36
APEX1-216ENST00000557159 TCOF1Q13428 1488 aaKnown RBP17.27■□□□□ 0.35
APEX1-216ENST00000557159 DIP2BQ9P265 1576 aa17.26■□□□□ 0.35
APEX1-216ENST00000557159 GLI2P10070 1586 aa17.24■□□□□ 0.35
APEX1-216ENST00000557159 KIF14Q15058 1648 aa17.24■□□□□ 0.35
APEX1-216ENST00000557159 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.23■□□□□ 0.351e-5■■■■□ 25.8
APEX1-216ENST00000557159 CNTLNQ9NXG0 1405 aa17.22■□□□□ 0.35
APEX1-216ENST00000557159 KIF13AQ9H1H9 1805 aa17.21■□□□□ 0.35
APEX1-216ENST00000557159 HIRIP3Q9BW71 556 aaPredicted RBP17.21■□□□□ 0.35
APEX1-216ENST00000557159 ABCA9Q8IUA7 1624 aa17.21■□□□□ 0.35
APEX1-216ENST00000557159 ZBED9Q6R2W3 1325 aa17.21■□□□□ 0.35
APEX1-216ENST00000557159 NAIPQ13075 1403 aa17.21■□□□□ 0.35
APEX1-216ENST00000557159 AKNAQ7Z591 1439 aa17.21■□□□□ 0.35
APEX1-216ENST00000557159 CD109Q6YHK3 1445 aa17.19■□□□□ 0.34
APEX1-216ENST00000557159 TTC37Q6PGP7 1564 aa17.19■□□□□ 0.34
APEX1-216ENST00000557159 POLR1AO95602 1720 aaPredicted RBP17.18■□□□□ 0.34
APEX1-216ENST00000557159 DEKP35659 375 aaKnown RBP17.18■□□□□ 0.34
APEX1-216ENST00000557159 PTPRKQ15262 1439 aa17.18■□□□□ 0.34
APEX1-216ENST00000557159 WASHC2AQ641Q2 1341 aa17.18■□□□□ 0.34
APEX1-216ENST00000557159 MAP3K4Q9Y6R4 1608 aa17.17■□□□□ 0.34
APEX1-216ENST00000557159 GCC2Q8IWJ2 1684 aa17.17■□□□□ 0.34
APEX1-216ENST00000557159 PLCH2O75038 1416 aa17.16■□□□□ 0.34
APEX1-216ENST00000557159 GPATCH8Q9UKJ3 1502 aaKnown RBP17.16■□□□□ 0.34
APEX1-216ENST00000557159 NCOA1Q15788 1441 aa17.15■□□□□ 0.34
APEX1-216ENST00000557159 NOP58Q9Y2X3 529 aaKnown RBP17.14■□□□□ 0.34
APEX1-216ENST00000557159 ARAP3Q8WWN8 1544 aa17.11■□□□□ 0.33
APEX1-216ENST00000557159 EIF4G2P78344 907 aaKnown RBP eCLIP17.11■□□□□ 0.33
APEX1-216ENST00000557159 ROCK1Q13464 1354 aa17.11■□□□□ 0.33
APEX1-216ENST00000557159 CDC42BPAQ5VT25 1732 aa17.11■□□□□ 0.33
APEX1-216ENST00000557159 HSPA5P11021 654 aaKnown RBP17.1■□□□□ 0.33
APEX1-216ENST00000557159 PRKRIP1Q9H875 184 aaPredicted RBP17.1■□□□□ 0.33
APEX1-216ENST00000557159 MYO5CQ9NQX4 1742 aa17.1■□□□□ 0.33
APEX1-216ENST00000557159 CFDP1Q9UEE9 299 aaPredicted RBP17.1■□□□□ 0.33
APEX1-216ENST00000557159 RNF123Q5XPI4 1314 aa17.1■□□□□ 0.33
APEX1-216ENST00000557159 CDC42BPBQ9Y5S2 1711 aa17.09■□□□□ 0.33
APEX1-216ENST00000557159 SMG6Q86US8 1419 aaKnown RBP17.09■□□□□ 0.33
APEX1-216ENST00000557159 IRX6P78412 446 aaPredicted RBP17.09■□□□□ 0.33
APEX1-216ENST00000557159 EFCAB2Q5VUJ9 269 aa17.09■□□□□ 0.33
APEX1-216ENST00000557159 PPRC1Q5VV67 1664 aaKnown RBP17.09■□□□□ 0.33
APEX1-216ENST00000557159 PREX2Q70Z35 1606 aa17.09■□□□□ 0.33
APEX1-216ENST00000557159 FANCAO15360 1455 aa17.08■□□□□ 0.33
APEX1-216ENST00000557159 TSPOAP1O95153 1857 aa17.08■□□□□ 0.33
APEX1-216ENST00000557159 CCDC7Q96M83 1385 aa17.08■□□□□ 0.32
APEX1-216ENST00000557159 ITSN2Q9NZM3 1697 aa17.08■□□□□ 0.32
APEX1-216ENST00000557159 ARHGAP5Q13017 1502 aa17.07■□□□□ 0.32
APEX1-216ENST00000557159 TEX14Q8IWB6 1497 aa17.07■□□□□ 0.32
APEX1-216ENST00000557159 DENND4BO75064 1496 aaPredicted RBP17.06■□□□□ 0.32
APEX1-216ENST00000557159 NEO1Q92859 1461 aa17.05■□□□□ 0.32
APEX1-216ENST00000557159 DNMT1P26358 1616 aaKnown RBP17.05■□□□□ 0.32
APEX1-216ENST00000557159 DAPK1P53355 1430 aa17.04■□□□□ 0.32
APEX1-216ENST00000557159 ZNF777Q9ULD5 760 aaPredicted RBP17.04■□□□□ 0.32
APEX1-216ENST00000557159 ZNF644Q9H582 1327 aaPredicted RBP17.04■□□□□ 0.32
APEX1-216ENST00000557159 B4GALNT3Q6L9W6 998 aa17.03■□□□□ 0.32
APEX1-216ENST00000557159 RRP7BPQ9NSQ0 103 aa17.02■□□□□ 0.31
APEX1-216ENST00000557159 IPO9Q96P70 1041 aaKnown RBP17.01■□□□□ 0.31
APEX1-216ENST00000557159 SPATA31E1Q6ZUB1 1445 aa17.01■□□□□ 0.31
APEX1-216ENST00000557159 CHIC2Q9UKJ5 165 aa17■□□□□ 0.31
APEX1-216ENST00000557159 ABCC5O15440 1437 aa17■□□□□ 0.31
APEX1-216ENST00000557159 CFAP74Q9C0B2 1584 aa17■□□□□ 0.31
APEX1-216ENST00000557159 KIAA1107Q9UPP5 1409 aa17■□□□□ 0.31
APEX1-216ENST00000557159 SAMD9LQ8IVG5 1584 aa17■□□□□ 0.31
APEX1-216ENST00000557159 CCDC184Q52MB2 194 aa16.99■□□□□ 0.31
APEX1-216ENST00000557159 MRS2Q9HD23 443 aa16.99■□□□□ 0.31
APEX1-216ENST00000557159 ADGRL1O94910 1474 aa16.99■□□□□ 0.31
APEX1-216ENST00000557159 ANP32AP39687 249 aaKnown RBP16.98■□□□□ 0.31
APEX1-216ENST00000557159 SCAPERQ9BY12 1400 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms