RNA–Protein interactions for RNA: ENST00000557157.5

HNRNPC-229, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-229ENST00000557157 SMARCA2P51531 1590 aa7.89□□□□□ -1.15
HNRNPC-229ENST00000557157 ARAP1Q96P48 1450 aa7.89□□□□□ -1.15
HNRNPC-229ENST00000557157 CABP2Q9NPB3 220 aa7.89□□□□□ -1.15
HNRNPC-229ENST00000557157 ERCC6L2Q5T890 1561 aa7.87□□□□□ -1.15
HNRNPC-229ENST00000557157 BOLA1Q9Y3E2 137 aa7.84□□□□□ -1.15
HNRNPC-229ENST00000557157 HECW2Q9P2P5 1572 aa7.83□□□□□ -1.16
HNRNPC-229ENST00000557157 EMP3P54852 163 aa7.82□□□□□ -1.16
HNRNPC-229ENST00000557157 MARVELD3Q96A59 401 aa7.82□□□□□ -1.16
HNRNPC-229ENST00000557157 DPY19L2Q6NUT2 758 aa7.81□□□□□ -1.16
HNRNPC-229ENST00000557157 KIF21AQ7Z4S6 1674 aa7.79□□□□□ -1.16
HNRNPC-229ENST00000557157 EFCAB3Q8N7B9 438 aa7.77□□□□□ -1.17
HNRNPC-229ENST00000557157 SPNS2Q8IVW8 549 aa7.76□□□□□ -1.17
HNRNPC-229ENST00000557157 RIOK3O14730 519 aaKnown RBP7.75□□□□□ -1.17
HNRNPC-229ENST00000557157 VGFO15240 615 aaPredicted RBP7.75□□□□□ -1.17
HNRNPC-229ENST00000557157 SOX12O15370 315 aa7.75□□□□□ -1.17
HNRNPC-229ENST00000557157 MMRN1Q13201 1228 aa7.75□□□□□ -1.17
HNRNPC-229ENST00000557157 DOK7Q18PE1 504 aa7.75□□□□□ -1.17
HNRNPC-229ENST00000557157 ZNF710Q8N1W2 664 aa7.75□□□□□ -1.17
HNRNPC-229ENST00000557157 HS3ST6Q96QI5 342 aa7.75□□□□□ -1.17
HNRNPC-229ENST00000557157 SCRIBQ14160 1630 aa7.74□□□□□ -1.17
HNRNPC-229ENST00000557157 FAM205CA6NFA0 338 aa7.74□□□□□ -1.17
HNRNPC-229ENST00000557157 RIMBP2O15034 1052 aa7.74□□□□□ -1.17
HNRNPC-229ENST00000557157 TAOK2Q9UL54 1235 aa7.74□□□□□ -1.17
HNRNPC-229ENST00000557157 RTN4Q9NQC3 1192 aaKnown RBP7.73□□□□□ -1.17
HNRNPC-229ENST00000557157 SYNJ2O15056 1496 aa7.71□□□□□ -1.18
HNRNPC-229ENST00000557157 HOXB3P14651 431 aaPredicted RBP7.71□□□□□ -1.18
HNRNPC-229ENST00000557157 HOXB1P14653 301 aaPredicted RBP7.71□□□□□ -1.18
HNRNPC-229ENST00000557157 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.7□□□□□ -1.18
HNRNPC-229ENST00000557157 ZFP91Q96JP5 570 aaPredicted RBP7.7□□□□□ -1.18
HNRNPC-229ENST00000557157 SPATA31D1Q6ZQQ2 1576 aa7.69□□□□□ -1.18
HNRNPC-229ENST00000557157 MICALL2Q8IY33 904 aa7.69□□□□□ -1.18
HNRNPC-229ENST00000557157 RNF25Q96BH1 459 aaPredicted RBP7.69□□□□□ -1.18
HNRNPC-229ENST00000557157 KRTAP3-3Q9BYR6 98 aa7.67□□□□□ -1.18
HNRNPC-229ENST00000557157 KRTAP3-2Q9BYR7 98 aa7.67□□□□□ -1.18
HNRNPC-229ENST00000557157 ZSWIM6Q9HCJ5 1215 aa7.67□□□□□ -1.18
HNRNPC-229ENST00000557157 POTEB3A0JP26 581 aa7.66□□□□□ -1.18
HNRNPC-229ENST00000557157 POTEBQ6S5H4 581 aa7.66□□□□□ -1.18
HNRNPC-229ENST00000557157 ERBB3P21860 1342 aa7.66□□□□□ -1.18
HNRNPC-229ENST00000557157 MYO15BQ96JP2 1530 aa7.66□□□□□ -1.18
HNRNPC-229ENST00000557157 WDR62O43379 1518 aa7.65□□□□□ -1.18
HNRNPC-229ENST00000557157 PHF8Q9UPP1 1060 aa7.65□□□□□ -1.18
HNRNPC-229ENST00000557157 NLRP6P59044 892 aa7.64□□□□□ -1.19
HNRNPC-229ENST00000557157 MS4A4AQ96JQ5 239 aa7.63□□□□□ -1.19
HNRNPC-229ENST00000557157 MRC2Q9UBG0 1479 aa7.62□□□□□ -1.19
HNRNPC-229ENST00000557157 TMEM92Q6UXU6 159 aa7.62□□□□□ -1.19
HNRNPC-229ENST00000557157 BCL11BQ9C0K0 894 aaPredicted RBP7.62□□□□□ -1.19
HNRNPC-229ENST00000557157 NCAPD3P42695 1498 aa7.62□□□□□ -1.19
HNRNPC-229ENST00000557157 AMER1Q5JTC6 1135 aaPredicted RBP7.6□□□□□ -1.19
HNRNPC-229ENST00000557157 STK24Q9Y6E0 443 aa7.6□□□□□ -1.19
HNRNPC-229ENST00000557157 VARS2Q5ST30 1063 aaKnown RBP7.59□□□□□ -1.19
HNRNPC-229ENST00000557157 HRCP23327 699 aa7.58□□□□□ -1.2
HNRNPC-229ENST00000557157 LAMC3Q9Y6N6 1575 aa7.58□□□□□ -1.2
HNRNPC-229ENST00000557157 STK25O00506 426 aa7.57□□□□□ -1.2
HNRNPC-229ENST00000557157 GPR153Q6NV75 609 aa7.57□□□□□ -1.2
HNRNPC-229ENST00000557157 FBXO22Q8NEZ5 403 aa7.57□□□□□ -1.2
HNRNPC-229ENST00000557157 ECM2O94769 699 aaPredicted RBP7.56□□□□□ -1.2
HNRNPC-229ENST00000557157 ZNF687Q8N1G0 1237 aa7.56□□□□□ -1.2
HNRNPC-229ENST00000557157 ADGRL1O94910 1474 aa7.55□□□□□ -1.2
HNRNPC-229ENST00000557157 PDS5BQ9NTI5 1447 aa7.55□□□□□ -1.2
HNRNPC-229ENST00000557157 MFRPQ9BY79 579 aa7.54□□□□□ -1.2
HNRNPC-229ENST00000557157 RSF1Q96T23 1441 aaPredicted RBP7.53□□□□□ -1.2
HNRNPC-229ENST00000557157 PTGER2P43116 358 aa7.53□□□□□ -1.2
HNRNPC-229ENST00000557157 ARSIQ5FYB1 569 aa7.52□□□□□ -1.21
HNRNPC-229ENST00000557157 RNF166Q96A37 237 aaPredicted RBP7.52□□□□□ -1.21
HNRNPC-229ENST00000557157 KIF13AQ9H1H9 1805 aa7.5□□□□□ -1.21
HNRNPC-229ENST00000557157 ZNF316A6NFI3 1004 aaPredicted RBP7.5□□□□□ -1.21
HNRNPC-229ENST00000557157 MYT1LQ9UL68 1186 aa7.5□□□□□ -1.21
HNRNPC-229ENST00000557157 KIF3CO14782 793 aa7.49□□□□□ -1.21
HNRNPC-229ENST00000557157 C2orf72A6NCS6 295 aa7.48□□□□□ -1.21
HNRNPC-229ENST00000557157 TMC2Q8TDI7 906 aa7.48□□□□□ -1.21
HNRNPC-229ENST00000557157 RGL2O15211 777 aa7.47□□□□□ -1.21
HNRNPC-229ENST00000557157 PKD2Q13563 968 aa7.47□□□□□ -1.21
HNRNPC-229ENST00000557157 ATAD2BQ9ULI0 1458 aa7.47□□□□□ -1.21
HNRNPC-229ENST00000557157 ZNF608Q9ULD9 1512 aaPredicted RBP7.47□□□□□ -1.21
HNRNPC-229ENST00000557157 CHD1O14646 1710 aa7.47□□□□□ -1.21
HNRNPC-229ENST00000557157 SLC24A1O60721 1099 aa7.46□□□□□ -1.22
HNRNPC-229ENST00000557157 SLC34A2O95436 690 aa7.46□□□□□ -1.22
HNRNPC-229ENST00000557157 PBX2P40425 430 aa7.46□□□□□ -1.22
HNRNPC-229ENST00000557157 ERICH6Q7L0X2 663 aa7.44□□□□□ -1.22
HNRNPC-229ENST00000557157 KHSRPQ92945 711 aaKnown RBP eCLIP7.44□□□□□ -1.226e-9■■■■□ 21.3
HNRNPC-229ENST00000557157 NUDT7P0C024 238 aa7.43□□□□□ -1.22
HNRNPC-229ENST00000557157 LSM11P83369 360 aaKnown RBP eCLIP7.43□□□□□ -1.22
HNRNPC-229ENST00000557157 ANKRD13DQ6ZTN6 518 aa7.43□□□□□ -1.22
HNRNPC-229ENST00000557157 PCDHGA4Q9Y5G9 962 aa7.43□□□□□ -1.22
HNRNPC-229ENST00000557157 HMGXB3Q12766 1538 aa7.42□□□□□ -1.22
HNRNPC-229ENST00000557157 PSDA5PKW4 1024 aaPredicted RBP7.42□□□□□ -1.22
HNRNPC-229ENST00000557157 KDM6BO15054 1643 aa7.41□□□□□ -1.22
HNRNPC-229ENST00000557157 SMARCA4P51532 1647 aa7.41□□□□□ -1.22
HNRNPC-229ENST00000557157 CERKQ8TCT0 537 aa7.41□□□□□ -1.22
HNRNPC-229ENST00000557157 LHX6Q9UPM6 363 aa7.4□□□□□ -1.22
HNRNPC-229ENST00000557157 PPP1R37O75864 691 aa7.36□□□□□ -1.23
HNRNPC-229ENST00000557157 HS6ST3Q8IZP7 471 aa7.36□□□□□ -1.23
HNRNPC-229ENST00000557157 CLASP1Q7Z460 1538 aa7.36□□□□□ -1.23
HNRNPC-229ENST00000557157 PRKCSHP14314 528 aaPredicted RBP7.35□□□□□ -1.23
HNRNPC-229ENST00000557157 FOXK1P85037 733 aa7.35□□□□□ -1.23
HNRNPC-229ENST00000557157 PTCD2Q8WV60 388 aaKnown RBP7.35□□□□□ -1.23
HNRNPC-229ENST00000557157 GAPVD1Q14C86 1478 aa7.35□□□□□ -1.23
HNRNPC-229ENST00000557157 URB2Q14146 1524 aaKnown RBP7.34□□□□□ -1.23
HNRNPC-229ENST00000557157 ARHGAP33O14559 1287 aa7.34□□□□□ -1.23
HNRNPC-229ENST00000557157 TBC1D12O60347 775 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms