RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 SSUH2Q9Y2M2 353 aa10.44□□□□□ -0.74
ATXN3-245ENST00000556958 PPRC1Q5VV67 1664 aaKnown RBP10.44□□□□□ -0.74
ATXN3-245ENST00000556958 PCF11O94913 1555 aaKnown RBP10.43□□□□□ -0.74
ATXN3-245ENST00000556958 RUSC2Q8N2Y8 1516 aa10.43□□□□□ -0.74
ATXN3-245ENST00000556958 KCNH8Q96L42 1107 aa10.43□□□□□ -0.74
ATXN3-245ENST00000556958 MAGI3Q5TCQ9 1506 aa10.4□□□□□ -0.74
ATXN3-245ENST00000556958 SPATA31D1Q6ZQQ2 1576 aa10.39□□□□□ -0.75
ATXN3-245ENST00000556958 KDM5BQ9UGL1 1544 aa10.39□□□□□ -0.75
ATXN3-245ENST00000556958 PHLDB1Q86UU1 1377 aa10.39□□□□□ -0.75
ATXN3-245ENST00000556958 MKRN4PQ13434 485 aaPredicted RBP10.38□□□□□ -0.75
ATXN3-245ENST00000556958 ZNF692Q9BU19 519 aaPredicted RBP10.38□□□□□ -0.75
ATXN3-245ENST00000556958 IGF1RP08069 1367 aa10.38□□□□□ -0.75
ATXN3-245ENST00000556958 MAP3K4Q9Y6R4 1608 aa10.37□□□□□ -0.75
ATXN3-245ENST00000556958 WDR7Q9Y4E6 1490 aa10.36□□□□□ -0.75
ATXN3-245ENST00000556958 CD44P16070 742 aaKnown RBP10.35□□□□□ -0.75
ATXN3-245ENST00000556958 RAPGEF3O95398 923 aa10.34□□□□□ -0.75
ATXN3-245ENST00000556958 ARAP3Q8WWN8 1544 aa10.33□□□□□ -0.76
ATXN3-245ENST00000556958 PRR29P0C7W0 189 aa10.32□□□□□ -0.76
ATXN3-245ENST00000556958 ATXN8OSP0DMR3 200 aa10.32□□□□□ -0.76
ATXN3-245ENST00000556958 YEATS2Q9ULM3 1422 aa10.32□□□□□ -0.76
ATXN3-245ENST00000556958 ZBTB22O15209 634 aa10.31□□□□□ -0.76
ATXN3-245ENST00000556958 FAM9AQ8IZU1 332 aaPredicted RBP10.31□□□□□ -0.76
ATXN3-245ENST00000556958 CSRNP3Q8WYN3 585 aa10.31□□□□□ -0.76
ATXN3-245ENST00000556958 ADAMTSL3P82987 1691 aa10.31□□□□□ -0.76
ATXN3-245ENST00000556958 KIF21BO75037 1637 aa10.29□□□□□ -0.76
ATXN3-245ENST00000556958 CARMIL1Q5VZK9 1371 aa10.29□□□□□ -0.76
ATXN3-245ENST00000556958 POGZQ7Z3K3 1410 aa10.29□□□□□ -0.76
ATXN3-245ENST00000556958 CLCN6P51797 869 aa10.28□□□□□ -0.76
ATXN3-245ENST00000556958 KIF27Q86VH2 1401 aa10.27□□□□□ -0.77
ATXN3-245ENST00000556958 DCBLD2Q96PD2 775 aa10.27□□□□□ -0.77
ATXN3-245ENST00000556958 CUL7Q14999 1698 aa10.26□□□□□ -0.77
ATXN3-245ENST00000556958 FARP1Q9Y4F1 1045 aaPredicted RBP10.25□□□□□ -0.77
ATXN3-245ENST00000556958 BIVM-ERCC5R4GMW8 1640 aa10.25□□□□□ -0.77
ATXN3-245ENST00000556958 DISP1Q96F81 1524 aa10.24□□□□□ -0.77
ATXN3-245ENST00000556958 UBAP1LF5GYI3 381 aa10.24□□□□□ -0.77
ATXN3-245ENST00000556958 OTUD5Q96G74 571 aa10.24□□□□□ -0.77
ATXN3-245ENST00000556958 POTEMA6NI47 508 aa10.22□□□□□ -0.77
ATXN3-245ENST00000556958 MLECQ14165 292 aa10.22□□□□□ -0.77
ATXN3-245ENST00000556958 PTPRTO14522 1441 aa10.22□□□□□ -0.77
ATXN3-245ENST00000556958 IQSEC2Q5JU85 1478 aa10.22□□□□□ -0.77
ATXN3-245ENST00000556958 ZCCHC11Q5TAX3 1644 aaKnown RBP10.22□□□□□ -0.77
ATXN3-245ENST00000556958 MADDQ8WXG6 1647 aa10.22□□□□□ -0.77
ATXN3-245ENST00000556958 IQGAP2Q13576 1575 aa10.2□□□□□ -0.78
ATXN3-245ENST00000556958 BCORL1Q5H9F3 1711 aa10.2□□□□□ -0.78
ATXN3-245ENST00000556958 CFAP43Q8NDM7 1665 aa10.19□□□□□ -0.78
ATXN3-245ENST00000556958 NEO1Q92859 1461 aa10.19□□□□□ -0.78
ATXN3-245ENST00000556958 AKNAQ7Z591 1439 aa10.19□□□□□ -0.78
ATXN3-245ENST00000556958 POTEB2H3BUK9 544 aa10.19□□□□□ -0.78
ATXN3-245ENST00000556958 CEBPAP49715 358 aaPredicted RBP10.18□□□□□ -0.78
ATXN3-245ENST00000556958 FANCAO15360 1455 aa10.17□□□□□ -0.78
ATXN3-245ENST00000556958 POTEGQ6S5H5 508 aa10.17□□□□□ -0.78
ATXN3-245ENST00000556958 ZNF579Q8NAF0 562 aaKnown RBP10.17□□□□□ -0.78
ATXN3-245ENST00000556958 UHRF1BP1Q6BDS2 1440 aa10.16□□□□□ -0.78
ATXN3-245ENST00000556958 UGGT2Q9NYU1 1516 aa10.15□□□□□ -0.78
ATXN3-245ENST00000556958 DENND4BO75064 1496 aaPredicted RBP10.15□□□□□ -0.78
ATXN3-245ENST00000556958 ARID3CA6NKF2 412 aa10.14□□□□□ -0.79
ATXN3-245ENST00000556958 RIMS1Q86UR5 1692 aaKnown RBP10.13□□□□□ -0.79
ATXN3-245ENST00000556958 SUPT5HO00267 1087 aaKnown RBP10.13□□□□□ -0.79
ATXN3-245ENST00000556958 HSPA1LP34931 641 aa10.13□□□□□ -0.79
ATXN3-245ENST00000556958 GALR2O43603 387 aaPredicted RBP10.12□□□□□ -0.79
ATXN3-245ENST00000556958 TOM1O60784 492 aa10.12□□□□□ -0.79
ATXN3-245ENST00000556958 FHOD3Q2V2M9 1422 aa10.12□□□□□ -0.79
ATXN3-245ENST00000556958 GOLGA3Q08378 1498 aa10.11□□□□□ -0.79
ATXN3-245ENST00000556958 ZRANB1Q9UGI0 708 aa10.11□□□□□ -0.79
ATXN3-245ENST00000556958 ESF1Q9H501 851 aaKnown RBP10.1□□□□□ -0.79
ATXN3-245ENST00000556958 LTBP4Q8N2S1 1624 aa10.1□□□□□ -0.79
ATXN3-245ENST00000556958 PIP4K2BP78356 416 aa10.09□□□□□ -0.79
ATXN3-245ENST00000556958 MAGI2Q86UL8 1455 aa10.09□□□□□ -0.79
ATXN3-245ENST00000556958 KIAA0556O60303 1618 aa10.08□□□□□ -0.8
ATXN3-245ENST00000556958 ATP10BO94823 1461 aa10.08□□□□□ -0.8
ATXN3-245ENST00000556958 ZNF335Q9H4Z2 1342 aaPredicted RBP10.07□□□□□ -0.8
ATXN3-245ENST00000556958 ARHGEF40Q8TER5 1519 aa10.07□□□□□ -0.8
ATXN3-245ENST00000556958 RAPGEF2Q9Y4G8 1499 aa10.07□□□□□ -0.8
ATXN3-245ENST00000556958 PLEKHD1A6NEE1 506 aa10.07□□□□□ -0.8
ATXN3-245ENST00000556958 ABCA8O94911 1581 aa10.06□□□□□ -0.8
ATXN3-245ENST00000556958 TTC37Q6PGP7 1564 aa10.05□□□□□ -0.8
ATXN3-245ENST00000556958 PKD2Q13563 968 aa10.04□□□□□ -0.8
ATXN3-245ENST00000556958 TRAPPC8Q9Y2L5 1435 aa10.04□□□□□ -0.8
ATXN3-245ENST00000556958 MED1Q15648 1581 aaPredicted RBP10.04□□□□□ -0.8
ATXN3-245ENST00000556958 ATP10AO60312 1499 aa10.04□□□□□ -0.8
ATXN3-245ENST00000556958 ABCA9Q8IUA7 1624 aa10.04□□□□□ -0.8
ATXN3-245ENST00000556958 EFCAB5A4FU69 1503 aa10.03□□□□□ -0.8
ATXN3-245ENST00000556958 ZFYVE16Q7Z3T8 1539 aa10.03□□□□□ -0.8
ATXN3-245ENST00000556958 NCOA1Q15788 1441 aa10.03□□□□□ -0.8
ATXN3-245ENST00000556958 FRMPD1Q5SYB0 1578 aa10.03□□□□□ -0.8
ATXN3-245ENST00000556958 PCDH10Q9P2E7 1040 aa10.03□□□□□ -0.8
ATXN3-245ENST00000556958 NCKAP5LQ9HCH0 1330 aa10.03□□□□□ -0.8
ATXN3-245ENST00000556958 ARHGEF12Q9NZN5 1544 aa10.02□□□□□ -0.81
ATXN3-245ENST00000556958 STRCQ7RTU9 1775 aa10.01□□□□□ -0.81
ATXN3-245ENST00000556958 P3H3Q8IVL6 736 aa10.01□□□□□ -0.81
ATXN3-245ENST00000556958 MYT1LQ9UL68 1186 aa10.01□□□□□ -0.81
ATXN3-245ENST00000556958 C9orf84Q5VXU9 1444 aa10□□□□□ -0.81
ATXN3-245ENST00000556958 PREX1Q8TCU6 1659 aa10□□□□□ -0.81
ATXN3-245ENST00000556958 PELP1Q8IZL8 1130 aaKnown RBP9.99□□□□□ -0.81
ATXN3-245ENST00000556958 SCAPERQ9BY12 1400 aa9.99□□□□□ -0.81
ATXN3-245ENST00000556958 ZMYM4Q5VZL5 1548 aa9.98□□□□□ -0.81
ATXN3-245ENST00000556958 LCE2DQ5TA82 110 aaPredicted RBP9.96□□□□□ -0.82
ATXN3-245ENST00000556958 EFCAB2Q5VUJ9 269 aa9.96□□□□□ -0.82
ATXN3-245ENST00000556958 CREBZFQ9NS37 354 aa9.96□□□□□ -0.82
ATXN3-245ENST00000556958 RGS17Q9UGC6 210 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms