RNA–Protein interactions for RNA: ENST00000556802.1

PMEL-219, Transcript of premelanosome protein, humanhuman

TSL 2

Gene PMEL, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-219ENST00000556802 EFCAB5A4FU69 1503 aa10.64□□□□□ -0.71
PMEL-219ENST00000556802 PCGF6Q9BYE7 350 aa10.64□□□□□ -0.71
PMEL-219ENST00000556802 CEBPAP49715 358 aaPredicted RBP10.63□□□□□ -0.71
PMEL-219ENST00000556802 FHOD3Q2V2M9 1422 aa10.6□□□□□ -0.71
PMEL-219ENST00000556802 UHRF1BP1Q6BDS2 1440 aa10.6□□□□□ -0.71
PMEL-219ENST00000556802 ZMYM4Q5VZL5 1548 aa10.6□□□□□ -0.71
PMEL-219ENST00000556802 HECW1Q76N89 1606 aa10.6□□□□□ -0.71
PMEL-219ENST00000556802 PLEKHD1A6NEE1 506 aa10.6□□□□□ -0.71
PMEL-219ENST00000556802 RANGAP1P46060 587 aaPredicted RBP10.59□□□□□ -0.71
PMEL-219ENST00000556802 ZEB1P37275 1124 aaPredicted RBP10.58□□□□□ -0.72
PMEL-219ENST00000556802 MYT1LQ9UL68 1186 aa10.58□□□□□ -0.72
PMEL-219ENST00000556802 MAGI2Q86UL8 1455 aa10.57□□□□□ -0.72
PMEL-219ENST00000556802 ARHGEF12Q9NZN5 1544 aa10.57□□□□□ -0.72
PMEL-219ENST00000556802 ATP10AO60312 1499 aa10.55□□□□□ -0.72
PMEL-219ENST00000556802 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.55□□□□□ -0.72
PMEL-219ENST00000556802 C3P01024 1663 aa10.55□□□□□ -0.72
PMEL-219ENST00000556802 UBAP1LF5GYI3 381 aa10.55□□□□□ -0.72
PMEL-219ENST00000556802 ESF1Q9H501 851 aaKnown RBP10.55□□□□□ -0.72
PMEL-219ENST00000556802 PTPRTO14522 1441 aa10.55□□□□□ -0.72
PMEL-219ENST00000556802 SUPT6HQ7KZ85 1726 aaKnown RBP10.55□□□□□ -0.72
PMEL-219ENST00000556802 SAMD9Q5K651 1589 aa10.54□□□□□ -0.72
PMEL-219ENST00000556802 C9orf84Q5VXU9 1444 aa10.54□□□□□ -0.72
PMEL-219ENST00000556802 SCAPERQ9BY12 1400 aa10.54□□□□□ -0.72
PMEL-219ENST00000556802 LTBP4Q8N2S1 1624 aa10.54□□□□□ -0.72
PMEL-219ENST00000556802 NUP153P49790 1475 aaKnown RBP10.54□□□□□ -0.72
PMEL-219ENST00000556802 IQSEC2Q5JU85 1478 aa10.53□□□□□ -0.72
PMEL-219ENST00000556802 SCAF1Q9H7N4 1312 aaKnown RBP10.53□□□□□ -0.72
PMEL-219ENST00000556802 MYO5CQ9NQX4 1742 aa10.52□□□□□ -0.73
PMEL-219ENST00000556802 PRXQ9BXM0 1461 aa10.51□□□□□ -0.73
PMEL-219ENST00000556802 PHF23Q9BUL5 403 aaPredicted RBP10.49□□□□□ -0.73
PMEL-219ENST00000556802 CEP162Q5TB80 1403 aa10.48□□□□□ -0.73
PMEL-219ENST00000556802 MED1Q15648 1581 aaPredicted RBP10.48□□□□□ -0.73
PMEL-219ENST00000556802 CAMSAP1Q5T5Y3 1602 aa10.47□□□□□ -0.73
PMEL-219ENST00000556802 EFCAB2Q5VUJ9 269 aa10.47□□□□□ -0.73
PMEL-219ENST00000556802 ATP1B4Q9UN42 357 aaPredicted RBP10.47□□□□□ -0.73
PMEL-219ENST00000556802 PIP4K2BP78356 416 aa10.46□□□□□ -0.73
PMEL-219ENST00000556802 ZNF335Q9H4Z2 1342 aaPredicted RBP10.46□□□□□ -0.73
PMEL-219ENST00000556802 PLCH2O75038 1416 aa10.46□□□□□ -0.74
PMEL-219ENST00000556802 NCOA1Q15788 1441 aa10.46□□□□□ -0.74
PMEL-219ENST00000556802 TRAPPC8Q9Y2L5 1435 aa10.45□□□□□ -0.74
PMEL-219ENST00000556802 NCKAP5LQ9HCH0 1330 aa10.45□□□□□ -0.74
PMEL-219ENST00000556802 CDK13Q14004 1512 aaKnown RBP10.44□□□□□ -0.74
PMEL-219ENST00000556802 ZNF518AQ6AHZ1 1483 aa10.44□□□□□ -0.74
PMEL-219ENST00000556802 AFAP1Q8N556 730 aa10.44□□□□□ -0.74
PMEL-219ENST00000556802 DIP2CQ9Y2E4 1556 aa10.43□□□□□ -0.74
PMEL-219ENST00000556802 HSPA1LP34931 641 aa10.43□□□□□ -0.74
PMEL-219ENST00000556802 CSRNP3Q8WYN3 585 aa10.43□□□□□ -0.74
PMEL-219ENST00000556802 ARHGAP5Q13017 1502 aa10.43□□□□□ -0.74
PMEL-219ENST00000556802 ABCA6Q8N139 1617 aa10.42□□□□□ -0.74
PMEL-219ENST00000556802 SENP3Q9H4L4 574 aaPredicted RBP10.4□□□□□ -0.74
PMEL-219ENST00000556802 KDM5CP41229 1560 aa10.39□□□□□ -0.75
PMEL-219ENST00000556802 MROH2AA6NES4 1674 aa10.39□□□□□ -0.75
PMEL-219ENST00000556802 TOM1O60784 492 aa10.39□□□□□ -0.75
PMEL-219ENST00000556802 KIF14Q15058 1648 aa10.39□□□□□ -0.75
PMEL-219ENST00000556802 CNTLNQ9NXG0 1405 aa10.39□□□□□ -0.75
PMEL-219ENST00000556802 REREQ9P2R6 1566 aa10.39□□□□□ -0.75
PMEL-219ENST00000556802 CDC42BPBQ9Y5S2 1711 aa10.38□□□□□ -0.75
PMEL-219ENST00000556802 PKD2Q13563 968 aa10.38□□□□□ -0.75
PMEL-219ENST00000556802 PPP6R1Q9UPN7 881 aa10.38□□□□□ -0.75
PMEL-219ENST00000556802 CDK11AQ9UQ88 783 aaPredicted RBP10.38□□□□□ -0.75
PMEL-219ENST00000556802 AGLP35573 1532 aa10.38□□□□□ -0.75
PMEL-219ENST00000556802 CLTCQ00610 1675 aaKnown RBP10.38□□□□□ -0.75
PMEL-219ENST00000556802 MYO3AQ8NEV4 1616 aa10.37□□□□□ -0.75
PMEL-219ENST00000556802 ZNF142P52746 1687 aaPredicted RBP10.37□□□□□ -0.75
PMEL-219ENST00000556802 ITSN2Q9NZM3 1697 aa10.36□□□□□ -0.75
PMEL-219ENST00000556802 KIDINS220Q9ULH0 1771 aa10.36□□□□□ -0.75
PMEL-219ENST00000556802 NPATQ14207 1427 aa10.35□□□□□ -0.75
PMEL-219ENST00000556802 ZMYM3Q14202 1370 aa10.35□□□□□ -0.75
PMEL-219ENST00000556802 POLR1AO95602 1720 aaPredicted RBP10.35□□□□□ -0.75
PMEL-219ENST00000556802 MLH3Q9UHC1 1453 aa10.35□□□□□ -0.75
PMEL-219ENST00000556802 CEP170BQ9Y4F5 1589 aaPredicted RBP10.34□□□□□ -0.75
PMEL-219ENST00000556802 CLIP1P30622 1438 aa10.33□□□□□ -0.76
PMEL-219ENST00000556802 PLA2R1Q13018 1463 aa10.33□□□□□ -0.76
PMEL-219ENST00000556802 VPS8Q8N3P4 1428 aa10.32□□□□□ -0.76
PMEL-219ENST00000556802 UBTFP17480 764 aaKnown RBP10.31□□□□□ -0.76
PMEL-219ENST00000556802 EHMT2Q96KQ7 1210 aa10.31□□□□□ -0.76
PMEL-219ENST00000556802 CPS1P31327 1500 aa10.31□□□□□ -0.76
PMEL-219ENST00000556802 TCOF1Q13428 1488 aaKnown RBP10.3□□□□□ -0.76
PMEL-219ENST00000556802 LRRIQ1Q96JM4 1722 aa10.3□□□□□ -0.76
PMEL-219ENST00000556802 PREX2Q70Z35 1606 aa10.3□□□□□ -0.76
PMEL-219ENST00000556802 ABCC1P33527 1531 aa10.3□□□□□ -0.76
PMEL-219ENST00000556802 ZNF777Q9ULD5 760 aaPredicted RBP10.3□□□□□ -0.76
PMEL-219ENST00000556802 TROQ12816 1431 aaPredicted RBP10.3□□□□□ -0.76
PMEL-219ENST00000556802 GGT6Q6P531 493 aa10.29□□□□□ -0.76
PMEL-219ENST00000556802 PTPRKQ15262 1439 aa10.29□□□□□ -0.76
PMEL-219ENST00000556802 CDC42BPAQ5VT25 1732 aa10.29□□□□□ -0.76
PMEL-219ENST00000556802 FMN1Q68DA7 1419 aa10.28□□□□□ -0.76
PMEL-219ENST00000556802 DNMT1P26358 1616 aaKnown RBP10.28□□□□□ -0.76
PMEL-219ENST00000556802 SHANK2Q9UPX8 1470 aa10.28□□□□□ -0.76
PMEL-219ENST00000556802 SPAG9O60271 1321 aaKnown RBP10.26□□□□□ -0.77
PMEL-219ENST00000556802 SAMD9LQ8IVG5 1584 aa10.26□□□□□ -0.77
PMEL-219ENST00000556802 A2ML1A8K2U0 1454 aa10.25□□□□□ -0.77
PMEL-219ENST00000556802 NEURL4Q96JN8 1562 aa10.23□□□□□ -0.77
PMEL-219ENST00000556802 ANKLE2Q86XL3 938 aa10.23□□□□□ -0.77
PMEL-219ENST00000556802 CFAP65Q6ZU64 1925 aaKnown RBP10.23□□□□□ -0.77
PMEL-219ENST00000556802 ATP7AQ04656 1500 aa10.23□□□□□ -0.77
PMEL-219ENST00000556802 SYCP2Q9BX26 1530 aa10.23□□□□□ -0.77
PMEL-219ENST00000556802 ADGBQ8N7X0 1667 aa10.22□□□□□ -0.77
PMEL-219ENST00000556802 SETD1AO15047 1707 aaKnown RBP10.22□□□□□ -0.77
PMEL-219ENST00000556802 HNRNPMP52272 730 aaKnown RBP eCLIP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms