RNA–Protein interactions for RNA: ENST00000556647.1

SRSF5-216, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-216ENST00000556647 PREX1Q8TCU6 1659 aa17.04■□□□□ 0.32
SRSF5-216ENST00000556647 FAM9AQ8IZU1 332 aaPredicted RBP17.03■□□□□ 0.32
SRSF5-216ENST00000556647 DENND4BO75064 1496 aaPredicted RBP17.03■□□□□ 0.32
SRSF5-216ENST00000556647 RNF216Q9NWF9 866 aaPredicted RBP17.02■□□□□ 0.32
SRSF5-216ENST00000556647 TTC37Q6PGP7 1564 aa17.02■□□□□ 0.31
SRSF5-216ENST00000556647 SIGLEC1Q9BZZ2 1709 aa17.01■□□□□ 0.31
SRSF5-216ENST00000556647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.01■□□□□ 0.31
SRSF5-216ENST00000556647 HNRNPUL2Q1KMD3 747 aaKnown RBP17.01■□□□□ 0.31
SRSF5-216ENST00000556647 RICTORQ6R327 1708 aa17■□□□□ 0.31
SRSF5-216ENST00000556647 PTPRTO14522 1441 aa16.98■□□□□ 0.31
SRSF5-216ENST00000556647 LTBP4Q8N2S1 1624 aa16.98■□□□□ 0.31
SRSF5-216ENST00000556647 UHRF1BP1Q6BDS2 1440 aa16.97■□□□□ 0.31
SRSF5-216ENST00000556647 UBAP1LF5GYI3 381 aa16.97■□□□□ 0.31
SRSF5-216ENST00000556647 P3H3Q8IVL6 736 aa16.97■□□□□ 0.31
SRSF5-216ENST00000556647 FHOD3Q2V2M9 1422 aa16.96■□□□□ 0.31
SRSF5-216ENST00000556647 ZFYVE16Q7Z3T8 1539 aa16.96■□□□□ 0.31
SRSF5-216ENST00000556647 IQSEC2Q5JU85 1478 aa16.96■□□□□ 0.31
SRSF5-216ENST00000556647 CTTNBP2Q8WZ74 1663 aa16.96■□□□□ 0.31
SRSF5-216ENST00000556647 EFCAB5A4FU69 1503 aa16.94■□□□□ 0.3
SRSF5-216ENST00000556647 SETD1BQ9UPS6 1966 aaKnown RBP16.91■□□□□ 0.3
SRSF5-216ENST00000556647 ARHGEF12Q9NZN5 1544 aa16.91■□□□□ 0.3
SRSF5-216ENST00000556647 ZMYM4Q5VZL5 1548 aa16.9■□□□□ 0.3
SRSF5-216ENST00000556647 MAGI2Q86UL8 1455 aa16.88■□□□□ 0.29
SRSF5-216ENST00000556647 MED1Q15648 1581 aaPredicted RBP16.87■□□□□ 0.29
SRSF5-216ENST00000556647 HECW1Q76N89 1606 aa16.87■□□□□ 0.29
SRSF5-216ENST00000556647 CFAP74Q9C0B2 1584 aa16.85■□□□□ 0.29
SRSF5-216ENST00000556647 ZBTB22O15209 634 aa16.85■□□□□ 0.29
SRSF5-216ENST00000556647 ATP10AO60312 1499 aa16.84■□□□□ 0.29
SRSF5-216ENST00000556647 PLEKHD1A6NEE1 506 aa16.83■□□□□ 0.28
SRSF5-216ENST00000556647 HSPA1LP34931 641 aa16.83■□□□□ 0.28
SRSF5-216ENST00000556647 ZNF335Q9H4Z2 1342 aaPredicted RBP16.83■□□□□ 0.28
SRSF5-216ENST00000556647 C9orf84Q5VXU9 1444 aa16.82■□□□□ 0.28
SRSF5-216ENST00000556647 RAPGEF6Q8TEU7 1601 aa16.81■□□□□ 0.28
SRSF5-216ENST00000556647 NCOA1Q15788 1441 aa16.79■□□□□ 0.28
SRSF5-216ENST00000556647 SCAPERQ9BY12 1400 aa16.79■□□□□ 0.28
SRSF5-216ENST00000556647 PIP4K2BP78356 416 aa16.79■□□□□ 0.28
SRSF5-216ENST00000556647 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.77■□□□□ 0.28
SRSF5-216ENST00000556647 HOXD11P31277 338 aaPredicted RBP16.77■□□□□ 0.28
SRSF5-216ENST00000556647 NCKAP5LQ9HCH0 1330 aa16.76■□□□□ 0.27
SRSF5-216ENST00000556647 ESF1Q9H501 851 aaKnown RBP16.76■□□□□ 0.27
SRSF5-216ENST00000556647 FOXD4L1Q9NU39 408 aa16.76■□□□□ 0.27
SRSF5-216ENST00000556647 MYT1LQ9UL68 1186 aa16.76■□□□□ 0.27
SRSF5-216ENST00000556647 C3P01024 1663 aa16.75■□□□□ 0.27
SRSF5-216ENST00000556647 NUP153P49790 1475 aaKnown RBP16.74■□□□□ 0.27
SRSF5-216ENST00000556647 TRAPPC8Q9Y2L5 1435 aa16.74■□□□□ 0.27
SRSF5-216ENST00000556647 CAMSAP1Q5T5Y3 1602 aa16.72■□□□□ 0.27
SRSF5-216ENST00000556647 TOM1O60784 492 aa16.69■□□□□ 0.26
SRSF5-216ENST00000556647 RANGAP1P46060 587 aaPredicted RBP16.67■□□□□ 0.26
SRSF5-216ENST00000556647 PLCH2O75038 1416 aa16.66■□□□□ 0.26
SRSF5-216ENST00000556647 EFCAB2Q5VUJ9 269 aa16.65■□□□□ 0.26
SRSF5-216ENST00000556647 AFAP1Q8N556 730 aa16.65■□□□□ 0.26
SRSF5-216ENST00000556647 SAMD9Q5K651 1589 aa16.64■□□□□ 0.25
SRSF5-216ENST00000556647 PKD2Q13563 968 aa16.64■□□□□ 0.25
SRSF5-216ENST00000556647 PRXQ9BXM0 1461 aa16.64■□□□□ 0.25
SRSF5-216ENST00000556647 ZNF518AQ6AHZ1 1483 aa16.61■□□□□ 0.25
SRSF5-216ENST00000556647 DIP2CQ9Y2E4 1556 aa16.59■□□□□ 0.25
SRSF5-216ENST00000556647 CNTLNQ9NXG0 1405 aa16.57■□□□□ 0.24
SRSF5-216ENST00000556647 SUPT6HQ7KZ85 1726 aaKnown RBP16.56■□□□□ 0.24
SRSF5-216ENST00000556647 RGS17Q9UGC6 210 aaPredicted RBP16.56■□□□□ 0.24
SRSF5-216ENST00000556647 REREQ9P2R6 1566 aa16.55■□□□□ 0.24
SRSF5-216ENST00000556647 AGLP35573 1532 aa16.55■□□□□ 0.24
SRSF5-216ENST00000556647 NPATQ14207 1427 aa16.55■□□□□ 0.24
SRSF5-216ENST00000556647 KDM5CP41229 1560 aa16.55■□□□□ 0.24
SRSF5-216ENST00000556647 PLA2R1Q13018 1463 aa16.54■□□□□ 0.24
SRSF5-216ENST00000556647 ZMYM3Q14202 1370 aa16.54■□□□□ 0.24
SRSF5-216ENST00000556647 MYO5CQ9NQX4 1742 aa16.53■□□□□ 0.24
SRSF5-216ENST00000556647 ABCA6Q8N139 1617 aa16.53■□□□□ 0.24
SRSF5-216ENST00000556647 CDK13Q14004 1512 aaKnown RBP16.53■□□□□ 0.24
SRSF5-216ENST00000556647 TCOF1Q13428 1488 aaKnown RBP16.53■□□□□ 0.24
SRSF5-216ENST00000556647 PTPRKQ15262 1439 aa16.5■□□□□ 0.23
SRSF5-216ENST00000556647 CPS1P31327 1500 aa16.5■□□□□ 0.23
SRSF5-216ENST00000556647 ARHGAP5Q13017 1502 aa16.5■□□□□ 0.23
SRSF5-216ENST00000556647 ATP1B4Q9UN42 357 aaPredicted RBP16.49■□□□□ 0.23
SRSF5-216ENST00000556647 MLH3Q9UHC1 1453 aa16.48■□□□□ 0.23
SRSF5-216ENST00000556647 MYO3AQ8NEV4 1616 aa16.48■□□□□ 0.23
SRSF5-216ENST00000556647 SHANK2Q9UPX8 1470 aa16.48■□□□□ 0.23
SRSF5-216ENST00000556647 CEP170BQ9Y4F5 1589 aaPredicted RBP16.47■□□□□ 0.23
SRSF5-216ENST00000556647 MROH2AA6NES4 1674 aa16.47■□□□□ 0.23
SRSF5-216ENST00000556647 ZNF142P52746 1687 aaPredicted RBP16.47■□□□□ 0.23
SRSF5-216ENST00000556647 POTEAQ6S8J7 498 aa16.45■□□□□ 0.22
SRSF5-216ENST00000556647 ALKQ9UM73 1620 aa16.43■□□□□ 0.22
SRSF5-216ENST00000556647 KIF14Q15058 1648 aa16.41■□□□□ 0.22
SRSF5-216ENST00000556647 CLTCQ00610 1675 aaKnown RBP16.41■□□□□ 0.22
SRSF5-216ENST00000556647 CDK11AQ9UQ88 783 aaPredicted RBP16.41■□□□□ 0.22
SRSF5-216ENST00000556647 KIDINS220Q9ULH0 1771 aa16.39■□□□□ 0.21
SRSF5-216ENST00000556647 SLC4A2P04920 1241 aa16.39■□□□□ 0.21
SRSF5-216ENST00000556647 GGT6Q6P531 493 aa16.37■□□□□ 0.21
SRSF5-216ENST00000556647 DNMT1P26358 1616 aaKnown RBP16.37■□□□□ 0.21
SRSF5-216ENST00000556647 POLR1AO95602 1720 aaPredicted RBP16.36■□□□□ 0.21
SRSF5-216ENST00000556647 A2ML1A8K2U0 1454 aa16.35■□□□□ 0.21
SRSF5-216ENST00000556647 NEURL4Q96JN8 1562 aa16.35■□□□□ 0.21
SRSF5-216ENST00000556647 CDC42BPBQ9Y5S2 1711 aa16.35■□□□□ 0.21
SRSF5-216ENST00000556647 SETD1AO15047 1707 aaKnown RBP16.34■□□□□ 0.21
SRSF5-216ENST00000556647 ANKLE2Q86XL3 938 aa16.34■□□□□ 0.21
SRSF5-216ENST00000556647 VWDEQ8N2E2 1590 aa16.34■□□□□ 0.21
SRSF5-216ENST00000556647 ABCC1P33527 1531 aa16.33■□□□□ 0.2
SRSF5-216ENST00000556647 ITSN2Q9NZM3 1697 aa16.33■□□□□ 0.2
SRSF5-216ENST00000556647 CLIP1P30622 1438 aa16.32■□□□□ 0.2
SRSF5-216ENST00000556647 TROQ12816 1431 aaPredicted RBP16.32■□□□□ 0.2
SRSF5-216ENST00000556647 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms