RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 ARHGEF12Q9NZN5 1544 aa7.79□□□□□ -1.16
ATXN3-242ENST00000556644 DENND4BO75064 1496 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-242ENST00000556644 ABCA8O94911 1581 aa7.79□□□□□ -1.16
ATXN3-242ENST00000556644 RICTORQ6R327 1708 aa7.78□□□□□ -1.16
ATXN3-242ENST00000556644 SETD1AO15047 1707 aaKnown RBP7.78□□□□□ -1.16
ATXN3-242ENST00000556644 KIF27Q86VH2 1401 aa7.78□□□□□ -1.16
ATXN3-242ENST00000556644 NCKAP5LQ9HCH0 1330 aa7.78□□□□□ -1.16
ATXN3-242ENST00000556644 EFCAB5A4FU69 1503 aa7.76□□□□□ -1.17
ATXN3-242ENST00000556644 FHOD3Q2V2M9 1422 aa7.76□□□□□ -1.17
ATXN3-242ENST00000556644 POTEAQ6S8J7 498 aa7.75□□□□□ -1.17
ATXN3-242ENST00000556644 CAMSAP1Q5T5Y3 1602 aa7.74□□□□□ -1.17
ATXN3-242ENST00000556644 ZMYM4Q5VZL5 1548 aa7.74□□□□□ -1.17
ATXN3-242ENST00000556644 TOM1O60784 492 aa7.73□□□□□ -1.17
ATXN3-242ENST00000556644 HECW1Q76N89 1606 aa7.73□□□□□ -1.17
ATXN3-242ENST00000556644 ATP10BO94823 1461 aa7.73□□□□□ -1.17
ATXN3-242ENST00000556644 C3P01024 1663 aa7.71□□□□□ -1.18
ATXN3-242ENST00000556644 SETD1BQ9UPS6 1966 aaKnown RBP7.71□□□□□ -1.18
ATXN3-242ENST00000556644 C9orf84Q5VXU9 1444 aa7.7□□□□□ -1.18
ATXN3-242ENST00000556644 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-242ENST00000556644 HNRNPUL2Q1KMD3 747 aaKnown RBP7.7□□□□□ -1.18
ATXN3-242ENST00000556644 ATP10AO60312 1499 aa7.69□□□□□ -1.18
ATXN3-242ENST00000556644 ALKQ9UM73 1620 aa7.69□□□□□ -1.18
ATXN3-242ENST00000556644 TRAPPC8Q9Y2L5 1435 aa7.69□□□□□ -1.18
ATXN3-242ENST00000556644 MAGI2Q86UL8 1455 aa7.68□□□□□ -1.18
ATXN3-242ENST00000556644 PPP6R1Q9UPN7 881 aa7.68□□□□□ -1.18
ATXN3-242ENST00000556644 P3H3Q8IVL6 736 aa7.67□□□□□ -1.18
ATXN3-242ENST00000556644 UPF1Q92900 1129 aaKnown RBP eCLIP7.67□□□□□ -1.18
ATXN3-242ENST00000556644 ADRA2BP18089 450 aa7.66□□□□□ -1.18
ATXN3-242ENST00000556644 SCAPERQ9BY12 1400 aa7.66□□□□□ -1.18
ATXN3-242ENST00000556644 GOLGA3Q08378 1498 aa7.66□□□□□ -1.18
ATXN3-242ENST00000556644 CFAP74Q9C0B2 1584 aa7.66□□□□□ -1.18
ATXN3-242ENST00000556644 ESF1Q9H501 851 aaKnown RBP7.65□□□□□ -1.18
ATXN3-242ENST00000556644 SRCAPQ6ZRS2 3230 aa7.65□□□□□ -1.19
ATXN3-242ENST00000556644 RAPGEF2Q9Y4G8 1499 aa7.64□□□□□ -1.19
ATXN3-242ENST00000556644 CPS1P31327 1500 aa7.63□□□□□ -1.19
ATXN3-242ENST00000556644 TCOF1Q13428 1488 aaKnown RBP7.63□□□□□ -1.19
ATXN3-242ENST00000556644 PTPRKQ15262 1439 aa7.63□□□□□ -1.19
ATXN3-242ENST00000556644 PKD2Q13563 968 aa7.63□□□□□ -1.19
ATXN3-242ENST00000556644 MYT1LQ9UL68 1186 aa7.63□□□□□ -1.19
ATXN3-242ENST00000556644 SHANK2Q9UPX8 1470 aa7.62□□□□□ -1.19
ATXN3-242ENST00000556644 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.62□□□□□ -1.19
ATXN3-242ENST00000556644 PLA2R1Q13018 1463 aa7.62□□□□□ -1.19
ATXN3-242ENST00000556644 CTTNBP2Q8WZ74 1663 aa7.61□□□□□ -1.19
ATXN3-242ENST00000556644 TRIM52Q96A61 297 aa7.61□□□□□ -1.19
ATXN3-242ENST00000556644 SUPT6HQ7KZ85 1726 aaKnown RBP7.61□□□□□ -1.19
ATXN3-242ENST00000556644 MYO3AQ8NEV4 1616 aa7.6□□□□□ -1.19
ATXN3-242ENST00000556644 SUPT5HO00267 1087 aaKnown RBP7.6□□□□□ -1.19
ATXN3-242ENST00000556644 DIP2CQ9Y2E4 1556 aa7.59□□□□□ -1.19
ATXN3-242ENST00000556644 CEP170BQ9Y4F5 1589 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-242ENST00000556644 RAPGEF6Q8TEU7 1601 aa7.59□□□□□ -1.19
ATXN3-242ENST00000556644 ZNF142P52746 1687 aaPredicted RBP7.58□□□□□ -1.2
ATXN3-242ENST00000556644 NUP153P49790 1475 aaKnown RBP7.58□□□□□ -1.2
ATXN3-242ENST00000556644 AFAP1Q8N556 730 aa7.58□□□□□ -1.2
ATXN3-242ENST00000556644 NPATQ14207 1427 aa7.58□□□□□ -1.2
ATXN3-242ENST00000556644 ABCA6Q8N139 1617 aa7.57□□□□□ -1.2
ATXN3-242ENST00000556644 FAM9AQ8IZU1 332 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-242ENST00000556644 CNTLNQ9NXG0 1405 aa7.57□□□□□ -1.2
ATXN3-242ENST00000556644 VWDEQ8N2E2 1590 aa7.57□□□□□ -1.2
ATXN3-242ENST00000556644 NEURL4Q96JN8 1562 aa7.57□□□□□ -1.2
ATXN3-242ENST00000556644 PLEKHD1A6NEE1 506 aa7.56□□□□□ -1.2
ATXN3-242ENST00000556644 AGLP35573 1532 aa7.56□□□□□ -1.2
ATXN3-242ENST00000556644 ZMYM3Q14202 1370 aa7.56□□□□□ -1.2
ATXN3-242ENST00000556644 RNF17Q9BXT8 1623 aaKnown RBP7.56□□□□□ -1.2
ATXN3-242ENST00000556644 LRRC7Q96NW7 1537 aa7.55□□□□□ -1.2
ATXN3-242ENST00000556644 ZNF518AQ6AHZ1 1483 aa7.54□□□□□ -1.2
ATXN3-242ENST00000556644 KDM5CP41229 1560 aa7.54□□□□□ -1.2
ATXN3-242ENST00000556644 REREQ9P2R6 1566 aa7.54□□□□□ -1.2
ATXN3-242ENST00000556644 PLCH2O75038 1416 aa7.53□□□□□ -1.2
ATXN3-242ENST00000556644 POLR1AO95602 1720 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-242ENST00000556644 SETBP1Q9Y6X0 1596 aa7.53□□□□□ -1.2
ATXN3-242ENST00000556644 MROH2AA6NES4 1674 aa7.52□□□□□ -1.21
ATXN3-242ENST00000556644 STRCP1A6NGW2 1772 aa7.51□□□□□ -1.21
ATXN3-242ENST00000556644 CLTCQ00610 1675 aaKnown RBP7.51□□□□□ -1.21
ATXN3-242ENST00000556644 EFCAB2Q5VUJ9 269 aa7.51□□□□□ -1.21
ATXN3-242ENST00000556644 DNMT1P26358 1616 aaKnown RBP7.51□□□□□ -1.21
ATXN3-242ENST00000556644 A2ML1A8K2U0 1454 aa7.5□□□□□ -1.21
ATXN3-242ENST00000556644 RANGAP1P46060 587 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-242ENST00000556644 CDK13Q14004 1512 aaKnown RBP7.49□□□□□ -1.21
ATXN3-242ENST00000556644 RBM33Q96EV2 1170 aaKnown RBP7.49□□□□□ -1.21
ATXN3-242ENST00000556644 NPHP4O75161 1426 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-242ENST00000556644 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.48□□□□□ -1.21
ATXN3-242ENST00000556644 ARHGAP5Q13017 1502 aa7.48□□□□□ -1.21
ATXN3-242ENST00000556644 SYNMO15061 1565 aa7.48□□□□□ -1.21
ATXN3-242ENST00000556644 MLH3Q9UHC1 1453 aa7.48□□□□□ -1.21
ATXN3-242ENST00000556644 MYO5CQ9NQX4 1742 aa7.47□□□□□ -1.21
ATXN3-242ENST00000556644 SAMD9Q5K651 1589 aa7.47□□□□□ -1.21
ATXN3-242ENST00000556644 MEX3CQ5U5Q3 659 aaKnown RBP7.47□□□□□ -1.21
ATXN3-242ENST00000556644 ZRANB1Q9UGI0 708 aa7.47□□□□□ -1.21
ATXN3-242ENST00000556644 LRP6O75581 1613 aa7.47□□□□□ -1.21
ATXN3-242ENST00000556644 RXRBP28702 533 aa7.46□□□□□ -1.22
ATXN3-242ENST00000556644 IFFO2Q5TF58 517 aa7.46□□□□□ -1.22
ATXN3-242ENST00000556644 ANKLE2Q86XL3 938 aa7.46□□□□□ -1.22
ATXN3-242ENST00000556644 FAM135BQ49AJ0 1406 aa7.45□□□□□ -1.22
ATXN3-242ENST00000556644 ITSN2Q9NZM3 1697 aa7.45□□□□□ -1.22
ATXN3-242ENST00000556644 ROBO1Q9Y6N7 1651 aa7.45□□□□□ -1.22
ATXN3-242ENST00000556644 ZNF772Q68DY9 489 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-242ENST00000556644 ABCC1P33527 1531 aa7.45□□□□□ -1.22
ATXN3-242ENST00000556644 IQGAP1P46940 1657 aa7.44□□□□□ -1.22
ATXN3-242ENST00000556644 KIDINS220Q9ULH0 1771 aa7.44□□□□□ -1.22
ATXN3-242ENST00000556644 NUTM2BA6NNL0 878 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms