RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 DIEXFQ68CQ4 756 aaKnown RBP26.67■■□□□ 1.86
SDR39U1-220ENST00000556548 ABCC10Q5T3U5 1492 aa26.66■■□□□ 1.86
SDR39U1-220ENST00000556548 TRIM52Q96A61 297 aa26.65■■□□□ 1.86
SDR39U1-220ENST00000556548 DNMT1P26358 1616 aaKnown RBP26.65■■□□□ 1.86
SDR39U1-220ENST00000556548 ABCC2Q92887 1545 aa26.65■■□□□ 1.86
SDR39U1-220ENST00000556548 KDM6BO15054 1643 aa26.64■■□□□ 1.86
SDR39U1-220ENST00000556548 GCC2Q8IWJ2 1684 aa26.61■■□□□ 1.85
SDR39U1-220ENST00000556548 AKNAQ7Z591 1439 aa26.61■■□□□ 1.85
SDR39U1-220ENST00000556548 CDC42BPAQ5VT25 1732 aa26.61■■□□□ 1.85
SDR39U1-220ENST00000556548 KCNH8Q96L42 1107 aa26.6■■□□□ 1.85
SDR39U1-220ENST00000556548 ROCK1Q13464 1354 aa26.57■■□□□ 1.84
SDR39U1-220ENST00000556548 HNRNPMP52272 730 aaKnown RBP eCLIP26.53■■□□□ 1.84
SDR39U1-220ENST00000556548 OSCARQ8IYS5 282 aa26.53■■□□□ 1.84
SDR39U1-220ENST00000556548 ZCCHC11Q5TAX3 1644 aaKnown RBP26.48■■□□□ 1.83
SDR39U1-220ENST00000556548 MPHOSPH9Q99550 1183 aa26.48■■□□□ 1.83
SDR39U1-220ENST00000556548 NCOA1Q15788 1441 aa26.48■■□□□ 1.83
SDR39U1-220ENST00000556548 UHRF1BP1LA0JNW5 1464 aa26.47■■□□□ 1.83
SDR39U1-220ENST00000556548 TTC37Q6PGP7 1564 aa26.47■■□□□ 1.83
SDR39U1-220ENST00000556548 FOXD1Q16676 465 aa26.47■■□□□ 1.83
SDR39U1-220ENST00000556548 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.46■■□□□ 1.83
SDR39U1-220ENST00000556548 DENND4BO75064 1496 aaPredicted RBP26.45■■□□□ 1.82
SDR39U1-220ENST00000556548 KDM5BQ9UGL1 1544 aa26.45■■□□□ 1.82
SDR39U1-220ENST00000556548 CDC42BPBQ9Y5S2 1711 aa26.44■■□□□ 1.82
SDR39U1-220ENST00000556548 TSPY4P0CV99 314 aa26.43■■□□□ 1.82
SDR39U1-220ENST00000556548 TSPY10P0CW01 314 aa26.43■■□□□ 1.82
SDR39U1-220ENST00000556548 CROCC2H7BZ55 1655 aa26.43■■□□□ 1.82
SDR39U1-220ENST00000556548 ANKRD30AQ9BXX3 1397 aa26.43■■□□□ 1.82
SDR39U1-220ENST00000556548 PREX2Q70Z35 1606 aa26.42■■□□□ 1.82
SDR39U1-220ENST00000556548 TONSLQ96HA7 1378 aa26.41■■□□□ 1.82
SDR39U1-220ENST00000556548 ARHGAP5Q13017 1502 aa26.41■■□□□ 1.82
SDR39U1-220ENST00000556548 C9orf84Q5VXU9 1444 aa26.41■■□□□ 1.82
SDR39U1-220ENST00000556548 SAMD9LQ8IVG5 1584 aa26.41■■□□□ 1.82
SDR39U1-220ENST00000556548 TIMELESSQ9UNS1 1208 aa26.4■■□□□ 1.82
SDR39U1-220ENST00000556548 ADGBQ8N7X0 1667 aa26.4■■□□□ 1.82
SDR39U1-220ENST00000556548 ADGRL2O95490 1459 aa26.39■■□□□ 1.82
SDR39U1-220ENST00000556548 MBD5Q9P267 1494 aa26.38■■□□□ 1.81
SDR39U1-220ENST00000556548 PPP1R15AO75807 674 aaPredicted RBP26.38■■□□□ 1.81
SDR39U1-220ENST00000556548 SLC4A1APQ9BWU0 796 aaKnown RBP26.37■■□□□ 1.81
SDR39U1-220ENST00000556548 MYT1Q01538 1121 aa26.33■■□□□ 1.81
SDR39U1-220ENST00000556548 SHANK2Q9UPX8 1470 aa26.33■■□□□ 1.81
SDR39U1-220ENST00000556548 ANKRD50Q9ULJ7 1429 aa26.32■■□□□ 1.8
SDR39U1-220ENST00000556548 SYCP2Q9BX26 1530 aa26.32■■□□□ 1.8
SDR39U1-220ENST00000556548 MYO5CQ9NQX4 1742 aa26.31■■□□□ 1.8
SDR39U1-220ENST00000556548 CCDC141Q6ZP82 1450 aa26.31■■□□□ 1.8
SDR39U1-220ENST00000556548 ARHGEF5Q12774 1597 aa26.31■■□□□ 1.8
SDR39U1-220ENST00000556548 KIF15Q9NS87 1388 aa26.28■■□□□ 1.8
SDR39U1-220ENST00000556548 PLCH2O75038 1416 aa26.28■■□□□ 1.8
SDR39U1-220ENST00000556548 ACIN1Q9UKV3 1341 aaKnown RBP26.27■■□□□ 1.8
SDR39U1-220ENST00000556548 RSPH4AQ5TD94 716 aa26.26■■□□□ 1.79
SDR39U1-220ENST00000556548 PZPP20742 1482 aa26.25■■□□□ 1.79
SDR39U1-220ENST00000556548 EFCAB2Q5VUJ9 269 aa26.25■■□□□ 1.79
SDR39U1-220ENST00000556548 MIER1Q8N108 512 aa26.24■■□□□ 1.79
SDR39U1-220ENST00000556548 WDR7Q9Y4E6 1490 aa26.24■■□□□ 1.79
SDR39U1-220ENST00000556548 HIRIP3Q9BW71 556 aaPredicted RBP26.23■■□□□ 1.79
SDR39U1-220ENST00000556548 ANKRD30BQ9BXX2 1392 aa26.23■■□□□ 1.79
SDR39U1-220ENST00000556548 ARHGEF12Q9NZN5 1544 aa26.22■■□□□ 1.79
SDR39U1-220ENST00000556548 NUP155O75694 1391 aa26.2■■□□□ 1.79
SDR39U1-220ENST00000556548 PKD2Q13563 968 aa26.2■■□□□ 1.78
SDR39U1-220ENST00000556548 ASXL2Q76L83 1435 aa26.19■■□□□ 1.78
SDR39U1-220ENST00000556548 KIAA1107Q9UPP5 1409 aa26.19■■□□□ 1.78
SDR39U1-220ENST00000556548 NPM1P06748 294 aaKnown RBP eCLIP26.19■■□□□ 1.78
SDR39U1-220ENST00000556548 PLEKHH2Q8IVE3 1493 aa26.18■■□□□ 1.78
SDR39U1-220ENST00000556548 L3MBTL2Q969R5 705 aa26.16■■□□□ 1.78
SDR39U1-220ENST00000556548 TRAPPC8Q9Y2L5 1435 aa26.13■■□□□ 1.77
SDR39U1-220ENST00000556548 AFAP1Q8N556 730 aa26.11■■□□□ 1.77
SDR39U1-220ENST00000556548 RPRD2Q5VT52 1461 aaKnown RBP26.1■■□□□ 1.77
SDR39U1-220ENST00000556548 ABCC1P33527 1531 aa26.1■■□□□ 1.77
SDR39U1-220ENST00000556548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.09■■□□□ 1.776e-6■□□□□ 8.3
SDR39U1-220ENST00000556548 MAST1Q9Y2H9 1570 aa26.09■■□□□ 1.77
SDR39U1-220ENST00000556548 FANCAO15360 1455 aa26.06■■□□□ 1.76
SDR39U1-220ENST00000556548 ABCA9Q8IUA7 1624 aa26.04■■□□□ 1.76
SDR39U1-220ENST00000556548 SPAG9O60271 1321 aaKnown RBP26.03■■□□□ 1.76
SDR39U1-220ENST00000556548 SCAF1Q9H7N4 1312 aaKnown RBP26.02■■□□□ 1.76
SDR39U1-220ENST00000556548 ARAP3Q8WWN8 1544 aa26.02■■□□□ 1.76
SDR39U1-220ENST00000556548 KDM5DQ9BY66 1539 aa26.01■■□□□ 1.75
SDR39U1-220ENST00000556548 DDX10Q13206 875 aaKnown RBP26■■□□□ 1.75
SDR39U1-220ENST00000556548 CYB5RLQ6IPT4 315 aa26■■□□□ 1.75
SDR39U1-220ENST00000556548 PLXNC1O60486 1568 aa26■■□□□ 1.75
SDR39U1-220ENST00000556548 MYT1LQ9UL68 1186 aa25.99■■□□□ 1.75
SDR39U1-220ENST00000556548 TEX14Q8IWB6 1497 aa25.99■■□□□ 1.75
SDR39U1-220ENST00000556548 NBPF8Q3BBV2 869 aa25.98■■□□□ 1.75
SDR39U1-220ENST00000556548 YTHDC1Q96MU7 727 aaKnown RBP25.98■■□□□ 1.75
SDR39U1-220ENST00000556548 FAM135AQ9P2D6 1515 aa25.97■■□□□ 1.75
SDR39U1-220ENST00000556548 DUOX2Q9NRD8 1548 aa25.96■■□□□ 1.75
SDR39U1-220ENST00000556548 SCAPERQ9BY12 1400 aa25.96■■□□□ 1.75
SDR39U1-220ENST00000556548 ADGRL1O94910 1474 aa25.96■■□□□ 1.75
SDR39U1-220ENST00000556548 ZNF326Q5BKZ1 582 aaKnown RBP25.92■■□□□ 1.74
SDR39U1-220ENST00000556548 CD109Q6YHK3 1445 aa25.91■■□□□ 1.74
SDR39U1-220ENST00000556548 HSPA5P11021 654 aaKnown RBP25.91■■□□□ 1.74
SDR39U1-220ENST00000556548 ERBINQ96RT1 1412 aa25.91■■□□□ 1.74
SDR39U1-220ENST00000556548 ZFYVE16Q7Z3T8 1539 aa25.9■■□□□ 1.74
SDR39U1-220ENST00000556548 UNC13BO14795 1591 aa25.89■■□□□ 1.74
SDR39U1-220ENST00000556548 RTEL1-TNFRSF6BF6WH68 1400 aa25.88■■□□□ 1.73
SDR39U1-220ENST00000556548 EIF4G2P78344 907 aaKnown RBP eCLIP25.86■■□□□ 1.73
SDR39U1-220ENST00000556548 ATP7AQ04656 1500 aa25.84■■□□□ 1.73
SDR39U1-220ENST00000556548 KDM2AQ9Y2K7 1162 aa25.83■■□□□ 1.73
SDR39U1-220ENST00000556548 RIMBP3CA6NJZ7 1639 aa25.82■■□□□ 1.72
SDR39U1-220ENST00000556548 RIMBP3BA6NNM3 1639 aa25.82■■□□□ 1.72
SDR39U1-220ENST00000556548 RIMBP3Q9UFD9 1639 aa25.82■■□□□ 1.72
SDR39U1-220ENST00000556548 IQGAP3Q86VI3 1631 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms